Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.2e-157 560.1 332 100.0
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 5.5e-123 444.9 332 77.7
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 6.0e-122 441.4 332 77.1
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 1.0e-121 440.7 295 94.2
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 9.3e-115 417.5 339 74.0
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 1.1e-112 410.6 350 72.6
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 7.6e-109 397.9 346 70.5
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.9e-108 396.0 332 73.8
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 6.3e-103 378.3 221 85.1
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 3.1e-102 375.9 221 83.7
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 2.6e-101 372.9 221 83.3
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 1.7e-100 370.2 347 61.1
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 2.9e-100 369.4 218 83.9
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 1.4e-99 367.1 221 81.4
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 1.4e-99 367.1 221 81.4
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 4.2e-99 365.5 333 63.4
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 7.2e-99 364.8 221 82.8
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 4.7e-98 362.1 354 63.3
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 7.9e-98 361.3 220 81.4
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 2.3e-97 359.8 219 79.5
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 3.0e-97 359.4 221 80.5
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 3.9e-97 359.0 221 80.1
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 6.7e-97 358.2 220 81.8
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 6.7e-97 358.2 348 63.8
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 8.8e-97 357.8 221 79.6
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 7.4e-96 354.8 345 59.4
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 7.4e-96 354.8 221 79.2
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 4.8e-95 352.1 221 78.7
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 6.3e-95 351.7 219 77.6
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 8.2e-95 351.3 220 77.7
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 1.1e-94 350.9 221 77.8
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 1.1e-94 350.9 219 77.2
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 1.4e-94 350.5 221 75.6
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 1.4e-94 350.5 206 83.5
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 1.8e-94 350.1 216 81.0
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 1.8e-94 350.1 218 82.1
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 1.8e-94 350.1 221 80.1
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 2.4e-94 349.7 221 78.7
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 5.3e-94 348.6 219 77.2
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 6.9e-94 348.2 219 76.7
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 9.1e-94 347.8 221 77.4
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 5.9e-93 345.1 221 75.1
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 1.7e-92 343.6 221 80.1
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 2.9e-92 342.8 221 76.0
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 3.8e-92 342.4 221 78.3
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 5.0e-92 342.0 221 76.0
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 1.1e-91 340.9 219 75.3
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.1e-91 340.9 221 77.8
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 1.9e-91 340.1 220 75.9
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 1.9e-91 340.1 220 75.9
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 1.9e-91 340.1 221 76.0
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 2.5e-91 339.7 221 75.6
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 3.2e-91 339.3 339 56.0
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 5.5e-91 338.6 219 75.3
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 9.4e-91 337.8 218 78.4
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 2.1e-90 336.7 221 73.3
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 6.1e-90 335.1 214 76.6
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 6.1e-90 335.1 206 78.2
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 3.9e-89 332.4 292 62.0
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 4.4e-88 328.9 217 72.4
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 7.4e-88 328.2 206 77.2
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 1.3e-87 327.4 221 74.7
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 1.4e-86 323.9 206 78.6
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 1.8e-86 323.6 220 74.5
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 4.1e-86 322.4 206 74.3
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 1.6e-85 320.5 206 78.2
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 4.5e-85 318.9 220 73.2
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 1.0e-84 317.8 325 54.8
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 2.9e-84 316.2 217 71.4
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 5.0e-84 315.5 196 78.1
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 8.5e-84 314.7 215 71.2
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 2.5e-83 313.2 221 71.5
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 2.7e-82 309.7 221 69.2
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 4.7e-82 308.9 227 67.4
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 4.7e-82 308.9 222 66.7
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 8.0e-82 308.1 218 72.9
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 6.7e-81 305.1 221 67.9
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 4.4e-80 302.4 253 64.8
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 8.2e-79 298.1 217 65.9
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 5.3e-78 295.4 210 68.1
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 9.1e-78 294.7 299 59.9
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 1.3e-76 290.8 235 63.8
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 1.3e-76 290.8 221 68.3
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 5.0e-76 288.9 218 66.1
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 1.9e-75 287.0 221 63.3
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 2.5e-75 286.6 217 66.4
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 4.2e-75 285.8 184 76.6
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 1.0e-73 281.2 349 53.9
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 2.3e-73 280.0 310 50.6
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 1.2e-72 277.7 216 62.5
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 9.8e-72 274.6 221 63.3
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 1.9e-67 260.4 218 59.6
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 4.4e-64 249.2 192 63.5
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 6.3e-63 245.4 224 62.1
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.8e-62 243.8 256 55.1
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.8e-62 243.8 256 55.1
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 3.3e-59 233.0 144 74.3
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 5.6e-59 232.3 184 63.6
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 1.0e-57 228.0 124 83.9
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 4.4e-56 222.6 173 64.7
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 8.3e-55 218.4 124 80.6
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 4.1e-54 216.1 124 80.6
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 7.0e-54 215.3 220 50.9
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 1.6e-53 214.2 123 80.5
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.5e-51 207.6 306 43.8
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 2.5e-51 206.8 220 50.5
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 3.6e-50 203.0 218 50.5
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 1.0e-44 184.9 200 51.0
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 3.9e-44 183.0 98 84.7
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 4.4e-40 169.5 221 47.1
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 2.8e-34 150.2 98 75.5
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 2.8e-34 150.2 97 76.3
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 1.4e-33 147.9 74 93.2
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 1.5e-24 117.9 243 33.3
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 4.4e-24 116.3 68 85.3
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 3.0e-20 103.6 61 83.6
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 3.9e-20 103.2 177 35.6
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 6.6e-20 102.4 164 38.4
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 5.8e-16 89.4 188 31.4
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 7.6e-16 89.0 48 97.9
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 2.2e-15 87.4 51 78.4
MBI06_g33106_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 6.2e-10 69.3 75 49.3
ATR0138G010 Amborella trichopoda HOM05D006516 ORTHO05D008083 1.1e-06 58.5 33 90.9


User provided reference genes

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