Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 6.2e-208 727.2 372 100.0
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.7e-202 709.1 369 98.4
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 8.6e-202 706.8 373 97.3
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 9.5e-201 703.4 369 97.8
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 3.6e-200 701.4 376 96.8
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 1.1e-180 636.7 382 86.6
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 4.1e-159 565.1 383 77.3
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 7.9e-155 550.8 383 76.8
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 2.7e-139 499.2 377 72.1
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 2.3e-138 496.1 389 70.7
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.0e-134 483.0 400 68.0
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.9e-133 479.2 400 67.5
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.9e-132 476.5 385 69.1
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 4.2e-132 475.3 375 70.7
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 6.1e-131 471.5 374 68.4
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 2.3e-130 469.5 375 70.1
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 3.0e-130 469.2 374 69.3
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 3.0e-130 469.2 375 69.3
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 6.7e-130 468.0 382 68.3
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 2.0e-129 466.5 389 66.8
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 1.8e-127 459.9 385 67.5
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 2.4e-127 459.5 384 66.9
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 5.3e-127 458.4 383 65.3
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 7.0e-127 458.0 375 68.0
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 1.2e-126 457.2 373 66.2
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 5.9e-126 454.9 372 65.6
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 3.8e-125 452.2 380 65.8
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 3.2e-124 449.1 378 65.6
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 4.2e-124 448.7 380 66.3
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 2.1e-123 446.4 389 63.8
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 4.7e-123 445.3 389 64.0
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 4.7e-123 445.3 383 64.2
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 1.8e-122 443.4 382 67.5
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 2.6e-121 439.5 373 64.9
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 2.6e-121 439.5 383 64.0
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 3.4e-121 439.1 363 66.4
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 3.4e-121 439.1 377 64.7
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 1.3e-120 437.2 388 62.9
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 3.7e-120 435.6 385 64.2
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 3.7e-120 435.6 380 63.9
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 8.3e-120 434.5 374 64.4
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 3.1e-119 432.6 388 63.7
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 9.1e-119 431.0 374 65.2
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 1.0e-117 427.6 367 63.8
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 1.3e-117 427.2 369 65.3
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 1.9e-116 423.3 394 61.9
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 1.9e-116 423.3 394 61.7
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 9.5e-116 421.0 369 65.0
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 9.5e-116 421.0 394 61.4
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 2.1e-115 419.9 394 61.7
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 3.6e-115 419.1 390 62.3
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 1.0e-114 417.5 394 62.2
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 6.8e-114 414.8 389 62.5
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 6.8e-114 414.8 376 63.6
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 8.8e-114 414.5 383 62.7
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 1.2e-113 414.1 370 61.9
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 1.5e-113 413.7 382 60.7
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 4.4e-113 412.1 369 64.0
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 5.7e-113 411.8 370 64.1
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 5.7e-113 411.8 371 62.5
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 9.8e-113 411.0 373 60.9
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 1.3e-112 410.6 383 62.7
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 4.9e-112 408.7 369 63.4
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 4.9e-112 408.7 369 63.4
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 8.3e-112 407.9 373 64.9
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 1.4e-111 407.1 384 61.2
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 1.0e-109 401.0 397 58.9
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 6.6e-109 398.3 396 59.3
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 1.1e-108 397.5 397 58.4
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 3.3e-108 396.0 383 60.6
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 2.1e-107 393.3 381 59.8
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 1.8e-106 390.2 337 65.3
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 6.8e-106 388.3 390 57.7
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 4.1e-103 379.0 390 57.7
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 5.4e-103 378.6 345 62.0
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 1.3e-101 374.0 380 58.2
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 1.7e-101 373.6 380 58.2
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 1.7e-101 373.6 378 55.6
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 2.3e-101 373.2 346 63.3
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 3.0e-101 372.9 369 61.0
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 9.5e-100 367.9 371 58.2
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 4.0e-98 362.5 374 57.5
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 2.0e-97 360.1 381 58.3
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 2.6e-97 359.8 374 58.3
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 2.6e-97 359.8 370 58.4
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 3.4e-97 359.4 375 57.9
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 3.4e-97 359.4 375 57.9
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 4.4e-97 359.0 378 58.5
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 5.8e-97 358.6 375 57.6
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 1.7e-96 357.1 375 57.3
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 2.2e-96 356.7 375 57.3
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 3.7e-96 355.9 374 57.5
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 3.7e-96 355.9 374 56.1
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 4.9e-96 355.5 374 56.7
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 3.2e-95 352.8 374 57.0
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 5.4e-95 352.1 372 55.9
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 2.0e-94 350.1 372 56.7
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 7.8e-94 348.2 370 55.4
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 7.8e-94 348.2 371 54.7
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 2.3e-93 346.7 369 56.9
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 2.3e-93 346.7 279 68.5
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 1.1e-92 344.4 374 57.0
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 1.1e-92 344.4 351 59.8
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 1.1e-92 344.4 351 59.8
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 5.6e-92 342.0 379 54.9
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 1.2e-91 340.9 374 56.4
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 4.4e-89 332.4 374 55.1
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 1.9e-87 327.0 362 53.0
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 4.6e-86 322.4 397 50.9
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 1.5e-84 317.4 387 50.4
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 1.2e-81 307.8 402 47.8
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 4.4e-81 305.8 305 54.4
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 2.9e-80 303.1 365 52.3
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.6e-78 297.4 283 59.4
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 1.0e-77 294.7 323 52.0
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 4.3e-76 289.3 320 53.4
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 3.6e-67 259.6 254 55.5
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 3.4e-65 253.1 365 44.4
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 3.8e-64 249.6 169 73.4
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 8.1e-59 231.9 290 50.7
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.8e-58 230.7 290 50.3
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 2.6e-49 200.3 212 58.5
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 6.5e-48 195.7 352 42.6
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 9.3e-47 191.8 220 53.2
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 4.6e-46 189.5 205 56.6
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 1.5e-33 147.9 140 66.4
Cre03.g150650 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 1.1e-31 141.7 373 31.9
PRCOL_00003864 Prasinoderma coloniale HOM05D005260 ORTHO05D006390 1.2e-30 138.3 277 34.7
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 6.1e-30 136.0 173 51.4
HPP92_018748 Vanilla planifolia HOM05D005260 ORTHO05D006390 8.8e-29 132.1 128 56.2
HanXRQChr09g0262911 Helianthus annuus HOM05D005260 ORTHO05D006390 2.6e-28 130.6 82 78.0
MELO3C004727.2 Cucumis melo HOM05D005260 ORTHO05D006390 5.3e-26 122.9 83 73.5
Atru.chr13.1961 Acer truncatum HOM05D005260 ORTHO05D006390 4.5e-25 119.8 168 50.6
ATR0579G027 Amborella trichopoda HOM05D005260 ORTHO05D006390 4.4e-20 103.2 119 52.1
Zm00001eb158280 Zea mays HOM05D005260 ORTHO05D006390 6.5e-16 89.4 93 49.5
MCO05G557 Micromonas commoda HOM05D005260 ORTHO05D006390 3.6e-14 83.6 227 26.0
ClCG06G012260 Citrullus lanatus HOM05D005260 ORTHO05D006390 8.8e-13 79.0 109 43.1
BolC3t13905H Brassica oleracea HOM05D005260 ORTHO05D006390 5.3e-10 69.7 52 75.0
unitig_747.g21900 Utricularia gibba HOM05D005260 ORTHO05D006390 1.7e-08 64.7 78 52.6
Cfa026666 Carpinus fangiana HOM05D005260 ORTHO05D006390 3.8e-08 63.5 243 26.3
CiPaw.12G098000 Carya illinoinensis HOM05D003547 ORTHO05D004236 6.5e-08 62.8 38 71.1
Gorai.011G083100 Gossypium raimondii HOM05D005260 ORTHO05D006390 8.5e-08 62.4 70 55.7
CBR_g37538 Chara braunii HOM05D005260 ORTHO05D006390 5.5e-07 59.7 81 39.5


User provided reference genes

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