Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-125 450.7 217 100.0
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 3.9e-85 318.5 148 99.3
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-59 233.8 129 89.1
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 2.8e-51 206.1 164 65.2
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-50 204.1 183 62.3
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.9e-48 196.1 175 64.0
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-48 195.7 170 66.5
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-47 193.7 175 64.6
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-44 183.0 162 63.0
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-42 175.3 150 66.0
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-38 163.3 84 89.3
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 1.9e-36 156.8 176 51.7
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-35 153.7 162 54.3
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-35 152.9 125 69.6
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-34 150.6 174 50.6
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-34 149.8 200 47.5
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-34 149.8 200 47.0
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 3.4e-33 146.0 135 63.7
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.8e-33 145.2 200 45.5
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 2.9e-32 142.9 200 45.5
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-31 140.6 200 46.5
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-29 133.7 126 59.5
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-28 129.0 133 54.1
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-26 124.4 171 49.1
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-26 124.4 171 49.1
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-26 122.9 168 48.2
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-26 122.9 168 48.2
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-26 122.5 173 47.4
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 4.1e-26 122.5 173 48.0
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.9e-26 121.7 170 47.6
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 9.0e-26 121.3 178 46.1
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-25 120.9 180 45.6
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-25 120.9 180 45.6
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-25 120.6 180 45.0
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-25 120.6 180 45.6
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-25 120.6 180 45.6
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-25 119.4 180 45.0
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 3.4e-25 119.4 173 46.8
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 5.9e-25 118.6 173 46.2
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.9e-25 118.6 180 44.4
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.6e-25 118.2 172 47.1
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-24 117.9 171 47.4
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 2.9e-24 116.3 178 44.4
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-24 115.9 168 42.9
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-24 115.9 168 42.9
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-24 115.9 171 46.8
FvH4_4g06201 Fragaria vesca HOM05D006732 ORTHO05D005682 5.0e-24 115.5 129 53.5
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 5.0e-24 115.5 169 44.4
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.5e-24 114.8 172 45.9
FvH4_1g03720 Fragaria vesca HOM05D006732 ORTHO05D035266 9.3e-23 111.3 103 62.1
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-22 109.4 171 42.7
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.6e-22 109.0 172 42.4
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-21 107.8 172 43.6
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-20 102.8 167 41.9
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-20 102.4 167 41.9
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 5.7e-20 102.1 165 40.6
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-20 102.1 171 42.1
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-19 100.9 165 40.0
FAN23G0757 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.3e-19 98.6 87 66.7
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-18 97.1 137 44.5
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-17 93.6 165 39.4
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-16 90.9 174 37.9
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 2.5e-15 86.7 165 38.8
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 4.2e-15 85.9 154 37.0
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-15 85.5 167 37.7
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-15 85.5 165 40.6
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-13 79.7 63 66.7
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.1e-13 79.0 134 39.6
FvH4_1g03820 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-12 77.4 52 75.0
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 5.7e-12 75.5 128 39.8
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 9.7e-12 74.7 181 30.9
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 2.2e-11 73.6 139 33.8
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 1.4e-10 70.9 180 31.7
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 1.4e-10 70.9 180 31.7
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 1.8e-10 70.5 211 29.9
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 2.4e-10 70.1 185 33.5
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.4e-10 70.1 184 29.3
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 5.3e-10 68.9 185 33.5
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 6.9e-10 68.6 177 33.9
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 6.9e-10 68.6 177 31.6
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 9.1e-10 68.2 184 29.3
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 2.6e-09 66.6 187 32.6
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 7.7e-09 65.1 178 30.9
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-08 64.7 167 32.3
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.9e-08 63.2 192 28.6
FvH4_7g30461 Fragaria vesca HOM05D008398 ORTHO05D035411 6.5e-08 62.0 143 35.0
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 6.5e-08 62.0 247 26.7
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 8.5e-08 61.6 144 33.3
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.1e-07 61.2 164 32.3
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.1e-07 61.2 164 32.3
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 1.1e-07 61.2 158 32.3
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 1.4e-07 60.8 217 28.1
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-07 60.8 82 45.1
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 1.4e-07 60.8 178 30.9
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 1.9e-07 60.5 161 31.1
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 3.2e-07 59.7 176 28.4
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.1e-06 57.0 106 34.0
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 4.7e-06 55.8 140 32.9
FvH4_5g09162 Fragaria vesca HOM05D006732 ORTHO05D005682 6.1e-06 55.5 54 51.9
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-06 55.1 32 75.0


User provided reference genes

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