Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G1520 Fragaria x ananassa HOM05D014719 ORTHO05D003355 1.7e-206 722.6 405 100.0
FvH4_1g28370 Fragaria vesca HOM05D014719 ORTHO05D003355 1.0e-184 650.2 399 94.0
FAN23G2175 Fragaria x ananassa HOM05D014719 ORTHO05D003355 2.1e-169 599.4 393 87.5
FAN26G0704 Fragaria x ananassa HOM05D014719 ORTHO05D003355 4.6e-140 501.9 364 85.4
FAN28G3008 Fragaria x ananassa HOM05D014719 ORTHO05D003355 3.0e-131 472.6 364 81.0
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 1.4e-120 437.2 395 62.8
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 4.3e-53 213.0 389 41.6
GSVIVG01014696001 Vitis vinifera HOM05D005863 ORTHO05D003355 1.5e-21 108.2 400 31.5
QL08p003943 Quercus lobata HOM05D014719 ORTHO05D003355 4.3e-21 106.7 399 30.1
CiPaw.12G138700 Carya illinoinensis HOM05D014719 ORTHO05D003355 1.8e-19 101.3 398 30.2
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 2.9e-17 94.0 415 27.7
Hma1.2p1_2829F.1_g329210 Hydrangea macrophylla HOM05D005863 ORTHO05D003355 2.4e-16 90.9 404 28.2
Rhsim04G0012300 Rhododendron simsii HOM05D005863 ORTHO05D003355 2.7e-15 87.4 393 28.8
Actinidia37152 Actinidia chinensis HOM05D005863 ORTHO05D003355 3.0e-14 84.0 392 27.0
CsaV3_7G011440 Cucumis sativus L. HOM05D031146 ORTHO05D003355 3.0e-14 84.0 372 29.3
vmacro09646 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 1.6e-12 78.2 382 25.7
Cpa.g.sc12.119 Carica papaya HOM05D005863 ORTHO05D003355 5.8e-10 69.7 381 26.5
ClCG09G021400 Citrullus lanatus HOM05D031146 ORTHO05D003355 5.8e-10 69.7 388 27.8
CSS0034444 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 7.6e-10 69.3 131 33.6
PGR031G0790 Punica granatum HOM05D005863 ORTHO05D003355 9.9e-10 68.9 375 24.5
Sed0025324 Sechium edule HOM05D031146 ORTHO05D003355 9.9e-10 68.9 387 26.4
C06p16270 Brassica napus HOM05D012516 ORTHO05D003355 1.9e-08 64.7 120 35.8
BolC6t36826H Brassica oleracea HOM05D012516 ORTHO05D003355 1.9e-08 64.7 120 35.8
Nn1g07525 Nelumbo nucifera HOM05D005863 ORTHO05D003355 2.4e-08 64.3 392 25.0
Sp1g41465 Schrenkiella parvula HOM05D012516 ORTHO05D003355 2.4e-08 64.3 119 32.8
BraA05t20625Z Brassica rapa HOM05D012516 ORTHO05D003355 3.2e-08 63.9 117 34.2
Haze_09834 Corylus avellana HOM05D014719 ORTHO05D003355 3.2e-08 63.9 147 34.0
Eucgr.F03684 Eucalyptus grandis HOM05D005863 ORTHO05D003355 4.2e-08 63.5 394 22.8
Potri.007G102500 Populus trichocarpa HOM05D005863 ORTHO05D003355 5.4e-08 63.2 117 35.0
Ca_02000_v3 Cicer arietinum L. HOM05D005863 ORTHO05D003355 7.1e-08 62.8 99 38.4
BcaC08g44222 Brassica carinata HOM05D012516 ORTHO05D003355 9.3e-08 62.4 120 35.0
AL1G63990 Arabidopsis lyrata HOM05D012516 ORTHO05D003355 1.6e-07 61.6 119 35.3
Gohir.D13G135600 Gossypium hirsutum HOM05D005863 ORTHO05D003355 1.6e-07 61.6 116 36.2
MBI14_g22553_MAGBIO Magnolia biondii HOM05D005863 ORTHO05D003355 1.6e-07 61.6 57 49.1
Thecc.07G012300 Theobroma cacao HOM05D005863 ORTHO05D003355 1.6e-07 61.6 116 36.2
Gorai.013G152000 Gossypium raimondii HOM05D005863 ORTHO05D003355 2.1e-07 61.2 116 36.2
SGA_v2.0_scaffold171G38860 Striga asiatica HOM05D005863 ORTHO05D003355 2.1e-07 61.2 374 27.5
EL10Ac4g07554 Beta vulgaris HOM05D038882 ORTHO05D003355 2.7e-07 60.8 360 24.7
Lalb_Chr18g0052131 Lupinus albus HOM05D005863 ORTHO05D003355 4.6e-07 60.1 106 36.8
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 6.0e-07 59.7 91 37.4
Sc16g0008130 Simmondsia chinensis HOM05D005863 ORTHO05D003355 6.0e-07 59.7 57 49.1
AT1G55865 Arabidopsis thaliana HOM05D012516 ORTHO05D003355 1.0e-06 58.9 119 32.8
A05p17260 Brassica napus HOM05D012516 ORTHO05D003355 1.0e-06 58.9 120 34.2
Thhalv10011171m.g Eutrema salsugineum HOM05D000747 ORTHO05D001683 1.3e-06 58.5 81 38.3
Glyma.15G157900 Glycine max HOM05D005863 ORTHO05D003355 1.8e-06 58.2 49 53.1
Medtr2g036070 Medicago truncatula HOM05D005863 ORTHO05D003355 1.8e-06 58.2 132 29.5
Psat1g149600 Pisum sativum HOM05D005863 ORTHO05D003355 1.8e-06 58.2 158 27.8
TPR.G1700 Trifolium pratense HOM05D005863 ORTHO05D003355 2.3e-06 57.8 128 30.5
CANSAT78G1634 Cannabis sativa HOM05D005863 ORTHO05D003355 3.0e-06 57.4 320 23.1
Gohir.A13G132200 Gossypium hirsutum HOM05D005863 ORTHO05D003355 3.9e-06 57.0 116 34.5
THA.LOC104822728 Tarenaya hassleriana HOM05D012516 ORTHO05D003355 6.7e-06 56.2 116 34.5
BcaB02g10795 Brassica carinata HOM05D012516 ORTHO05D003355 8.7e-06 55.8 112 32.1
Ciclev10008896m.g Citrus clementina HOM05D005863 ORTHO05D003355 8.7e-06 55.8 57 47.4


User provided reference genes

Program Settings