Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G1460 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.4e-124 449.5 207 100.0
FAN05G5109 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.1e-108 396.7 181 98.9
FAN10G3275 Fragaria x ananassa HOM05D007761 ORTHO05D011461 6.0e-104 380.9 293 66.6
FAN22G1235 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.5e-102 376.3 181 95.6
FAN12G0192 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.3e-102 375.2 293 65.9
FAN01G0429 Fragaria x ananassa HOM05D007761 ORTHO05D011461 5.6e-102 374.4 181 95.0
FAN01G0683 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.6e-101 372.9 293 64.8
FAN27G0095 Fragaria x ananassa HOM05D007761 ORTHO05D011461 2.8e-101 372.1 181 94.5
FAN06G3287 Fragaria x ananassa HOM05D007761 ORTHO05D011461 4.8e-101 371.3 231 77.1
FAN03G0276 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.4e-100 369.8 181 94.5
FAN16G1949 Fragaria x ananassa HOM05D007761 ORTHO05D011461 9.7e-86 320.5 159 94.3
FAN25G1610 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.7e-58 229.9 243 53.1
FAN12G0607 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.3e-50 203.8 174 61.5
FAN14G1493 Fragaria x ananassa HOM05D001253 ORTHO05D001086 1.3e-37 160.6 94 77.7
FAN15G1618 Fragaria x ananassa HOM05D007761 ORTHO05D011461 2.3e-31 139.8 175 45.7
FAN24G1835 Fragaria x ananassa HOM05D018529 ORTHO05D016305 2.0e-30 136.7 74 77.0
FAN07G1261 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.7e-29 133.7 140 50.0
FAN24G0486 Fragaria x ananassa HOM05D007761 ORTHO05D011461 2.9e-29 132.9 69 81.2
FAN24G2462 Fragaria x ananassa HOM05D018529 ORTHO05D016305 3.7e-29 132.5 74 75.7
FAN02G0387 Fragaria x ananassa HOM05D007761 ORTHO05D011083 1.4e-28 130.6 89 65.2
FAN05G3475 Fragaria x ananassa HOM05D007761 ORTHO05D011461 7.0e-28 128.3 71 78.9
FAN22G1122 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.9e-26 122.5 107 57.9
FAN27G1171 Fragaria x ananassa HOM05D007761 ORTHO05D011083 4.3e-25 119.0 164 41.5
FAN08G3144 Fragaria x ananassa HOM05D007761 ORTHO05D011461 9.5e-25 117.9 217 40.6
FAN16G3080 Fragaria x ananassa HOM05D007761 ORTHO05D000537 1.2e-24 117.5 219 39.7
FAN18G4536 Fragaria x ananassa HOM05D007761 ORTHO05D015647 8.9e-23 111.3 81 66.7
FAN27G1253 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.2e-22 110.9 191 40.8
FAN04G2478 Fragaria x ananassa HOM05D007761 ORTHO05D011461 2.2e-21 106.7 162 40.7
FAN08G0278 Fragaria x ananassa HOM05D007761 ORTHO05D011461 6.4e-21 105.1 69 65.2
FAN12G3955 Fragaria x ananassa HOM05D007761 ORTHO05D015647 9.2e-20 101.3 121 47.9
FAN28G1246 Fragaria x ananassa HOM05D007761 ORTHO05D202161 1.2e-19 100.9 72 61.1
FAN04G2389 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.7e-18 97.1 73 64.4
FvH4_6g19980 Fragaria vesca HOM05D007761 ORTHO05D035530 8.6e-18 94.7 100 53.0
FAN09G0722 Fragaria x ananassa HOM05D007761 ORTHO05D011461 8.6e-18 94.7 100 54.0
FAN20G0086 Fragaria x ananassa HOM05D007761 ORTHO05D035530 1.9e-17 93.6 54 75.9
FAN14G5498 Fragaria x ananassa HOM05D001557 ORTHO05D001299 4.3e-17 92.4 47 85.1
FvH4_5g00140 Fragaria vesca HOM05D007761 ORTHO05D015647 2.1e-16 90.1 127 45.7
FAN05G5759 Fragaria x ananassa HOM05D007761 ORTHO05D201104 8.1e-16 88.2 85 50.6
FAN23G1385 Fragaria x ananassa HOM05D015953 ORTHO05D019200 8.1e-16 88.2 139 42.4
FvH4_4g03360 Fragaria vesca HOM05D007761 ORTHO05D004145 1.4e-15 87.4 58 69.0
FAN01G1911 Fragaria x ananassa HOM05D007761 ORTHO05D001299 3.4e-14 82.8 47 74.5
FAN24G2207 Fragaria x ananassa HOM05D007761 ORTHO05D015647 7.6e-14 81.6 127 40.9
FvH4_5g31890 Fragaria vesca HOM05D006059 ORTHO05D019147 9.9e-14 81.3 90 48.9
FAN05G2747 Fragaria x ananassa HOM05D015953 ORTHO05D202276 1.3e-13 80.9 137 34.3
RcHm_v2.0_Chr1g0351211 Rosa chinensis HOM05D007741 ORTHO05D015647 1.3e-13 80.9 70 57.1
FvH4_4g11971 Fragaria vesca HOM05D000564 ORTHO05D001690 1.7e-13 80.5 42 85.7
FAN14G0624 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.7e-13 80.5 42 83.3
FAN22G2224 Fragaria x ananassa HOM05D007761 ORTHO05D001299 6.4e-13 78.6 74 51.4
FAN27G3291 Fragaria x ananassa HOM05D007761 ORTHO05D003203 8.4e-13 78.2 88 46.6
FAN13G3075 Fragaria x ananassa HOM05D001229 ORTHO05D001374 1.4e-12 77.4 66 57.6
FAN02G2026 Fragaria x ananassa HOM05D007761 ORTHO05D204379 3.2e-12 76.3 59 57.6
RcHm_v2.0_Chr4g0422711 Rosa chinensis HOM05D007741 ORTHO05D011461 3.2e-12 76.3 71 53.5
FAN15G2716 Fragaria x ananassa HOM05D007761 ORTHO05D015647 4.2e-12 75.9 81 51.9
FAN24G3207 Fragaria x ananassa HOM05D009354 ORTHO05D046532 5.4e-12 75.5 68 58.8
FAN12G2355 Fragaria x ananassa HOM05D007761 ORTHO05D011461 7.1e-12 75.1 32 93.8
FAN09G4565 Fragaria x ananassa HOM05D007761 ORTHO05D015647 9.2e-12 74.7 192 34.9
FAN10G1655 Fragaria x ananassa HOM05D038727 ORTHO05D045813 1.2e-11 74.3 124 41.9
RcHm_v2.0_Chr6g0280951 Rosa chinensis HOM05D007761 ORTHO05D011461 2.7e-11 73.2 65 58.5
FAN16G2345 Fragaria x ananassa HOM05D007761 ORTHO05D022710 1.0e-10 71.2 85 49.4
FAN03G1355 Fragaria x ananassa HOM05D000713 ORTHO05D000547 1.7e-10 70.5 46 71.7
FAN15G2924 Fragaria x ananassa HOM05D007761 ORTHO05D001299 3.9e-10 69.3 41 65.9
FAN26G0058 Fragaria x ananassa HOM05D007761 ORTHO05D210449 3.9e-10 69.3 44 65.9
FAN05G4712 Fragaria x ananassa HOM05D007761 ORTHO05D022710 3.3e-09 66.2 44 65.9
FAN11G0210 Fragaria x ananassa HOM05D038588 ORTHO05D045961 3.3e-09 66.2 40 72.5
FAN05G3071 Fragaria x ananassa HOM05D007761 ORTHO05D209680 5.6e-09 65.5 69 46.4
FAN02G2626 Fragaria x ananassa HOM05D007761 ORTHO05D000285 7.3e-09 65.1 45 64.4
FAN03G2046 Fragaria x ananassa HOM05D008445 ORTHO05D011083 9.6e-09 64.7 162 32.1
FAN21G0972 Fragaria x ananassa HOM05D007761 ORTHO05D202729 1.2e-08 64.3 41 65.9
RcHm_v2.0_Chr2g0140171 Rosa chinensis HOM05D007741 ORTHO05D015647 1.2e-08 64.3 66 51.5
FAN09G2793 Fragaria x ananassa HOM05D007741 ORTHO05D204231 1.6e-08 63.9 109 39.4
FAN21G0448 Fragaria x ananassa HOM05D007761 ORTHO05D015647 3.6e-08 62.8 42 69.0
FAN15G3044 Fragaria x ananassa HOM05D000180 ORTHO05D000099 6.2e-08 62.0 30 86.7
FAN25G1796 Fragaria x ananassa HOM05D007761 ORTHO05D045668 6.2e-08 62.0 125 36.8
FAN27G1809 Fragaria x ananassa HOM05D007761 ORTHO05D206830 1.1e-07 61.2 63 50.8
FAN27G2198 Fragaria x ananassa HOM05D007761 ORTHO05D205366 1.1e-07 61.2 47 59.6
RcHm_v2.0_Chr3g0447381 Rosa chinensis HOM05D007761 ORTHO05D022710 1.1e-07 61.2 46 58.7
FAN18G1962 Fragaria x ananassa HOM05D007761 ORTHO05D204436 1.4e-07 60.8 45 68.9
FAN12G3425 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.8e-07 60.5 61 47.5
FAN11G1101 Fragaria x ananassa HOM05D008445 ORTHO05D010376 5.3e-07 58.9 128 34.4
FAN23G1770 Fragaria x ananassa HOM05D008445 ORTHO05D011083 5.3e-07 58.9 103 37.9
RcHm_v2.0_Chr1g0358041 Rosa chinensis HOM05D007741 ORTHO05D347005 5.3e-07 58.9 44 61.4
FAN11G1752 Fragaria x ananassa HOM05D007741 ORTHO05D204122 6.9e-07 58.5 158 33.5
RcHm_v2.0_Chr1g0339901 Rosa chinensis HOM05D007741 ORTHO05D016318 6.9e-07 58.5 50 54.0
RcHm_v2.0_Chr1g0346381 Rosa chinensis HOM05D007741 ORTHO05D016318 6.9e-07 58.5 50 54.0
RcHm_v2.0_Chr2g0119361 Rosa chinensis HOM05D007741 ORTHO05D016318 6.9e-07 58.5 50 54.0
RcHm_v2.0_Chr4g0423141 Rosa chinensis HOM05D007741 ORTHO05D016318 6.9e-07 58.5 50 54.0
RcHm_v2.0_Chr6g0279711 Rosa chinensis HOM05D007741 ORTHO05D016318 6.9e-07 58.5 50 54.0
FAN08G0423 Fragaria x ananassa HOM05D007761 ORTHO05D207630 9.0e-07 58.2 91 39.6
FAN08G3184 Fragaria x ananassa HOM05D007761 ORTHO05D206550 9.0e-07 58.2 91 39.6
FAN11G2655 Fragaria x ananassa HOM05D022094 ORTHO05D202872 9.0e-07 58.2 155 31.0
FAN14G1338 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.2e-06 57.8 103 36.9
FvH4_6g16421 Fragaria vesca HOM05D000030 ORTHO05D000009 1.5e-06 57.4 26 92.3
FAN05G4706 Fragaria x ananassa HOM05D007761 ORTHO05D198865 1.5e-06 57.4 70 47.1
FAN13G0088 Fragaria x ananassa HOM05D002366 ORTHO05D002499 1.5e-06 57.4 38 60.5
FAN18G4008 Fragaria x ananassa HOM05D007741 ORTHO05D200570 2.0e-06 57.0 64 50.0
RcHm_v2.0_Chr1g0367541 Rosa chinensis HOM05D007741 ORTHO05D011083 2.0e-06 57.0 71 42.3
FAN05G2318 Fragaria x ananassa HOM05D008445 ORTHO05D022710 2.6e-06 56.6 40 57.5
FAN12G2273 Fragaria x ananassa HOM05D007741 ORTHO05D209008 2.6e-06 56.6 121 36.4
FvH4_4g07610 Fragaria vesca HOM05D008445 ORTHO05D011083 3.4e-06 56.2 127 33.9
FAN01G0838 Fragaria x ananassa HOM05D008445 ORTHO05D011083 3.4e-06 56.2 106 34.9
FAN03G0027 Fragaria x ananassa HOM05D060314 ORTHO05D022710 3.4e-06 56.2 44 61.4
FAN07G0152 Fragaria x ananassa HOM05D008445 ORTHO05D011083 3.4e-06 56.2 127 33.9
FAN11G1680 Fragaria x ananassa HOM05D007741 ORTHO05D204100 3.4e-06 56.2 53 50.9
RcHm_v2.0_Chr5g0050261 Rosa chinensis HOM05D007741 ORTHO05D014215 3.4e-06 56.2 86 37.2
FAN20G2857 Fragaria x ananassa HOM05D017632 ORTHO05D029434 4.4e-06 55.8 109 34.9
FAN18G1114 Fragaria x ananassa HOM05D008445 ORTHO05D020651 7.6e-06 55.1 65 43.1
RcHm_v2.0_Chr1g0320181 Rosa chinensis HOM05D028330 ORTHO05D341788 7.6e-06 55.1 53 49.1
FvH4_5g02440 Fragaria vesca HOM05D009150 ORTHO05D005238 9.9e-06 54.7 36 72.2
FAN10G2132 Fragaria x ananassa HOM05D007741 ORTHO05D204785 9.9e-06 54.7 114 33.3


User provided reference genes

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