Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G1386 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.1e-85 318.9 154 100.0
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.3e-36 156.0 85 89.4
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 6.8e-36 154.5 85 88.2
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.0e-35 152.9 151 59.6
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 7.6e-35 151.0 97 80.4
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 8.4e-34 147.5 84 88.1
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 2.4e-33 146.0 142 58.5
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 9.6e-30 134.0 85 71.8
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 1.2e-29 133.7 85 72.9
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 3.4e-27 125.6 142 50.7
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 7.6e-27 124.4 85 65.9
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 1.7e-26 123.2 142 50.0
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 1.7e-26 123.2 137 49.6
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 2.9e-26 122.5 85 67.1
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 3.8e-26 122.1 95 61.1
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 4.9e-26 121.7 85 67.1
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 8.4e-26 120.9 145 46.9
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 1.9e-25 119.8 142 49.3
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 2.4e-25 119.4 85 63.5
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 3.2e-25 119.0 131 49.6
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 3.2e-25 119.0 85 64.7
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 3.2e-25 119.0 85 64.7
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 3.2e-25 119.0 85 65.9
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 4.2e-25 118.6 85 62.4
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 9.3e-25 117.5 131 48.9
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 9.3e-25 117.5 131 48.9
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 9.3e-25 117.5 94 60.6
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.2e-24 117.1 144 47.9
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 2.1e-24 116.3 85 63.5
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 2.1e-24 116.3 85 62.4
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 3.5e-24 115.5 85 61.2
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 4.6e-24 115.2 85 63.5
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 4.6e-24 115.2 84 64.3
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 6.0e-24 114.8 92 60.9
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 7.8e-24 114.4 92 58.7
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 7.8e-24 114.4 82 67.1
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 7.8e-24 114.4 144 45.8
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 1.0e-23 114.0 85 67.1
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 1.0e-23 114.0 94 55.3
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 1.3e-23 113.6 85 63.5
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 1.3e-23 113.6 85 63.5
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 1.3e-23 113.6 85 63.5
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 1.3e-23 113.6 85 61.2
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 1.7e-23 113.2 92 59.8
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 1.7e-23 113.2 85 58.8
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.7e-23 113.2 85 62.4
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 1.7e-23 113.2 85 61.2
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 2.3e-23 112.8 85 62.4
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 3.0e-23 112.5 94 59.6
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 3.0e-23 112.5 94 59.6
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 3.0e-23 112.5 85 62.4
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 3.9e-23 112.1 85 62.4
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 3.9e-23 112.1 85 61.2
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 5.1e-23 111.7 85 62.4
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 5.1e-23 111.7 85 62.4
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 5.1e-23 111.7 85 58.8
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 6.6e-23 111.3 92 60.9
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 6.6e-23 111.3 85 61.2
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 6.6e-23 111.3 92 55.4
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 8.7e-23 110.9 85 60.0
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 1.1e-22 110.5 85 63.5
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 1.5e-22 110.2 92 57.6
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 1.5e-22 110.2 94 55.3
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 2.5e-22 109.4 85 58.8
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 2.5e-22 109.4 92 55.4
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 2.5e-22 109.4 85 57.6
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 3.3e-22 109.0 85 58.8
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 4.3e-22 108.6 142 44.4
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 7.3e-22 107.8 92 57.6
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 7.3e-22 107.8 142 43.0
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 9.6e-22 107.5 86 61.6
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 9.6e-22 107.5 86 61.6
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 9.6e-22 107.5 104 51.9
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 1.3e-21 107.1 92 54.3
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 1.3e-21 107.1 85 57.6
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 2.1e-21 106.3 94 54.3
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 2.8e-21 105.9 86 59.3
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 2.8e-21 105.9 86 59.3
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 3.6e-21 105.5 85 60.0
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 3.6e-21 105.5 90 58.9
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 4.8e-21 105.1 122 48.4
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 4.8e-21 105.1 85 58.8
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 4.8e-21 105.1 85 57.6
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 6.2e-21 104.8 79 65.8
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 8.1e-21 104.4 86 59.3
MBI07_g39750_MAGBIO Magnolia biondii HOM05D004979 ORTHO05D006190 8.1e-21 104.4 133 45.1
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 2.4e-20 102.8 86 59.3
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 2.4e-20 102.8 86 59.3
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 2.4e-20 102.8 86 59.3
Cpa.g.sc46.2 Carica papaya HOM05D004979 ORTHO05D006190 4.0e-20 102.1 78 61.5
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 4.0e-20 102.1 92 53.3
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 9.0e-20 100.9 85 65.9
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 9.0e-20 100.9 79 62.0
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 2.0e-19 99.8 94 57.4
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 2.0e-19 99.8 112 47.3
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 2.0e-19 99.8 89 57.3
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 7.1e-17 91.3 85 49.4
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 7.1e-17 91.3 96 50.0
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 3.0e-15 85.9 105 45.7
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 5.6e-14 81.6 100 44.0
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 1.1e-12 77.4 87 44.8
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.8e-12 76.6 89 49.4
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 2.4e-12 76.3 123 39.0
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 3.1e-12 75.9 124 42.7
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 3.1e-12 75.9 91 41.8
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 4.0e-12 75.5 87 46.0
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 7.6e-11 71.2 97 45.4
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 8.4e-10 67.8 94 44.7
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.9e-09 66.6 71 53.5
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 5.5e-09 65.1 94 42.6
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 1.6e-08 63.5 111 39.6
Rhsim05G0125000 Rhododendron simsii HOM05D004979 ORTHO05D006190 2.7e-08 62.8 127 35.4
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.3e-07 60.5 92 40.2


User provided reference genes

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