Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-265 918.3 430 100.0
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 6.4e-225 783.9 375 97.9
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 3.6e-220 768.1 431 85.4
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.2e-176 620.9 365 83.3
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 3.1e-126 456.1 465 57.0
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 7.3e-112 408.3 249 78.3
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-110 402.5 631 41.8
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-109 401.0 446 54.5
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-94 349.7 400 52.2
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 6.5e-84 315.5 215 74.9
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-81 306.2 185 79.5
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 4.8e-71 272.7 417 41.5
FvH4_1g03720 Fragaria vesca HOM05D006732 ORTHO05D035266 1.5e-69 267.7 187 73.3
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 1.0e-68 265.0 412 41.0
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 2.2e-68 263.8 411 41.6
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-68 263.1 409 39.9
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-67 261.5 434 39.2
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-67 260.0 430 39.5
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.2e-67 259.6 429 39.4
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 5.5e-67 259.2 420 40.2
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.2e-67 258.8 412 39.8
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-66 257.7 374 40.6
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-66 255.4 344 46.2
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-65 254.2 413 39.5
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-65 253.8 413 40.2
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-64 251.5 411 38.0
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-64 250.0 413 39.5
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-64 249.2 417 37.4
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.4e-64 248.8 381 41.7
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.4e-64 248.8 381 41.7
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-63 247.3 423 37.8
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 4.8e-63 246.1 406 38.2
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-62 245.0 373 41.0
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-62 244.6 443 35.4
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-61 241.1 410 39.0
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.5e-61 239.6 380 40.0
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 4.5e-61 239.6 412 38.8
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.9e-60 236.9 430 39.5
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.9e-60 236.9 404 40.8
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.0e-60 236.1 434 36.9
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.5e-60 235.3 426 39.4
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-59 233.8 429 40.1
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 5.5e-59 232.6 400 37.2
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 9.4e-59 231.9 429 39.4
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-58 229.9 424 39.6
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.1e-58 229.2 335 42.1
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.7e-56 221.9 341 43.7
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-55 221.1 402 37.3
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.2e-55 218.8 374 36.9
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-53 214.9 405 37.5
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-53 213.4 419 35.1
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 4.5e-53 213.0 347 39.2
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.7e-53 212.2 302 40.4
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 6.5e-52 209.1 276 44.9
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 6.3e-47 192.6 361 37.1
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.3e-47 192.6 361 37.1
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-46 191.8 169 61.5
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-46 189.9 175 64.6
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-45 187.6 364 36.8
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.9e-44 183.7 337 38.9
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-43 180.6 320 40.0
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-42 176.4 379 31.9
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.1e-42 176.0 146 63.0
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 6.3e-39 166.0 238 46.6
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 8.3e-39 165.6 197 52.8
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 3.5e-37 160.2 227 38.8
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-36 158.7 330 35.5
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.2e-35 152.5 255 37.3
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 3.6e-34 150.2 287 36.6
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-33 147.9 143 58.0
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.3e-31 139.0 175 41.1
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-30 138.7 217 41.9
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 9.2e-30 135.6 188 39.4
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-27 127.9 116 59.5
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-27 127.9 116 59.5
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-26 123.2 167 38.3
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.0e-26 122.5 166 39.8
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-25 121.3 104 60.6
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 8.9e-25 119.0 171 39.2
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 2.3e-20 104.4 146 39.7
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.6e-20 102.4 250 35.2
FAN23G0757 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-19 101.3 136 47.1
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-19 100.1 206 30.1
FvH4_4g06201 Fragaria vesca HOM05D006732 ORTHO05D005682 2.3e-17 94.4 121 50.4
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-17 94.0 58 70.7
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 5.2e-17 93.2 102 46.1
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 8.9e-17 92.4 460 25.2
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 8.9e-17 92.4 460 25.2
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-16 90.9 57 73.7
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 2.9e-15 87.4 310 30.6
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-14 85.1 101 41.6
RcHm_v2.0_Chr1g0337091 Rosa chinensis HOM05D010677 ORTHO05D012678 1.4e-14 85.1 281 29.2
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 4.1e-14 83.6 384 25.8
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 2.1e-13 81.3 207 33.3
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-13 80.5 53 60.4
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 3.5e-13 80.5 380 26.1
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 6.0e-13 79.7 373 28.4
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-12 78.6 53 58.5
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 5.1e-12 76.6 313 27.8
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 6.6e-12 76.3 386 27.5
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 1.1e-11 75.5 274 27.4
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 1.9e-11 74.7 275 28.0
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.9e-11 74.7 276 27.5
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.3e-11 73.9 75 46.7
FvH4_7g31260 Fragaria vesca HOM05D010677 ORTHO05D012678 3.6e-10 70.5 405 23.2
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 6.2e-10 69.7 305 25.2
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.1e-10 69.3 69 46.4
RcHm_v2.0_Chr1g0337131 Rosa chinensis HOM05D006732 ORTHO05D012678 3.1e-09 67.4 203 28.1
FAN10G3231 Fragaria x ananassa HOM05D000122 ORTHO05D000139 6.8e-09 66.2 269 26.0
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 1.2e-08 65.5 319 21.9
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.2e-08 65.5 376 26.1
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.2e-08 65.5 217 28.6
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 1.2e-08 65.5 196 30.1
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 1.5e-08 65.1 198 30.3
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.5e-08 65.1 217 28.6
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 1.5e-08 65.1 144 34.0
FvH4_6g52510 Fragaria vesca HOM05D013417 ORTHO05D022618 3.4e-08 63.9 308 26.9
RcHm_v2.0_Chr2g0090221 Rosa chinensis HOM05D006732 ORTHO05D005682 3.4e-08 63.9 195 28.2
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 4.4e-08 63.5 219 28.3
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 9.9e-08 62.4 209 28.2
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 9.9e-08 62.4 443 23.3
FAN06G1115 Fragaria x ananassa HOM05D010677 ORTHO05D012678 9.9e-08 62.4 294 25.2
FAN06G1601 Fragaria x ananassa HOM05D010677 ORTHO05D012678 9.9e-08 62.4 294 25.2
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 9.9e-08 62.4 223 29.6
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 2.9e-07 60.8 203 29.1
FAN14G4282 Fragaria x ananassa HOM05D013417 ORTHO05D022618 2.9e-07 60.8 206 30.6
FvH4_7g30470 Fragaria vesca HOM05D008398 ORTHO05D046348 6.4e-07 59.7 227 28.6
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 6.4e-07 59.7 252 27.4
FAN12G2017 Fragaria x ananassa HOM05D013417 ORTHO05D022618 6.4e-07 59.7 308 26.6
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 8.4e-07 59.3 383 24.0
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 8.4e-07 59.3 383 24.0
FvH4_4g12220 Fragaria vesca HOM05D013417 ORTHO05D022618 1.1e-06 58.9 309 26.2
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.1e-06 58.9 227 29.5
FAN18G2036 Fragaria x ananassa HOM05D013417 ORTHO05D005682 1.1e-06 58.9 285 26.7
FAN19G2055 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-06 57.0 55 50.9
FvH4_7g30731 Fragaria vesca HOM05D008398 ORTHO05D035236 5.4e-06 56.6 256 28.1
FAN06G1253 Fragaria x ananassa HOM05D008398 ORTHO05D035236 5.4e-06 56.6 256 28.1


User provided reference genes

Program Settings