Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G0874 Fragaria x ananassa HOM05D000669 ORTHO05D008810 1.2e-49 199.5 98 100.0
FvH4_1g13030 Fragaria vesca HOM05D000669 ORTHO05D008810 2.9e-32 141.7 75 96.0
FAN23G2804 Fragaria x ananassa HOM05D000669 ORTHO05D008810 4.2e-31 137.9 75 94.7
FAN28G0240 Fragaria x ananassa HOM05D000669 ORTHO05D008810 3.9e-29 131.3 75 88.0
FAN19G3134 Fragaria x ananassa HOM05D000669 ORTHO05D008810 6.7e-29 130.6 73 90.4
RcHm_v2.0_Chr2g0101191 Rosa chinensis HOM05D000669 ORTHO05D008810 1.1e-26 123.2 75 85.3
FAN26G1638 Fragaria x ananassa HOM05D000669 ORTHO05D008810 4.0e-21 104.8 67 82.1
Prupe.7G156700 Prunus persica HOM05D000669 ORTHO05D008810 2.2e-16 89.0 75 66.7
MD02G1144900 Malus domestica HOM05D000669 ORTHO05D008810 2.3e-13 79.0 78 56.4
CiPaw.02G019200 Carya illinoinensis HOM05D000669 ORTHO05D008810 8.8e-13 77.0 76 61.8
Cfa004329 Carpinus fangiana HOM05D000669 ORTHO05D008810 4.4e-12 74.7 75 61.3
QL06p046584 Quercus lobata HOM05D000669 ORTHO05D008810 2.2e-11 72.4 75 58.7
Atru.chr3.603 Acer truncatum HOM05D000669 ORTHO05D008810 4.8e-11 71.2 75 56.0
ClCG07G008390 Citrullus lanatus HOM05D000669 ORTHO05D008810 4.8e-11 71.2 75 54.7
Potri.007G023200 Populus trichocarpa HOM05D000669 ORTHO05D008810 4.8e-11 71.2 76 59.2
CANSAT01G1107 Cannabis sativa HOM05D000669 ORTHO05D008810 8.3e-11 70.5 75 54.7
Sabra07G0020200 Salix brachista HOM05D000669 ORTHO05D008810 4.1e-10 68.2 76 56.6
Thecc.01G033100 Theobroma cacao HOM05D000669 ORTHO05D008810 9.1e-10 67.0 75 50.7
Duzib147G0643 Durio zibethinus HOM05D000669 ORTHO05D008810 1.2e-09 66.6 75 49.3
Gorai.007G202000 Gossypium raimondii HOM05D000669 ORTHO05D008810 1.6e-09 66.2 75 48.0
Gohir.A11G183300 Gossypium hirsutum HOM05D000669 ORTHO05D008810 2.7e-09 65.5 75 48.0
TWI73G1074 Tripterygium wilfordii HOM05D000669 ORTHO05D008810 2.7e-09 65.5 77 51.9
TAR376G0664 Trochodendron aralioides HOM05D000669 ORTHO05D008810 3.5e-09 65.1 75 48.0
Lsat_1_v5_gn_3_76061 Lactuca sativa HOM05D000669 ORTHO05D008810 5.9e-09 64.3 75 53.3
MELO3C016374.2 Cucumis melo HOM05D000669 ORTHO05D008810 7.7e-09 63.9 75 50.7
Dinv13511 Davidia involucrata HOM05D000669 ORTHO05D008810 1.0e-08 63.5 80 53.8
PGR102G2455 Punica granatum HOM05D000669 ORTHO05D008810 1.7e-08 62.8 74 45.9
CsaV3_4G005770 Cucumis sativus L. HOM05D000669 ORTHO05D008810 6.5e-08 60.8 75 48.0
Sed0011076 Sechium edule HOM05D000669 ORTHO05D008810 1.5e-07 59.7 75 49.3
HanXRQChr16g0530621 Helianthus annuus HOM05D000669 ORTHO05D008810 2.5e-07 58.9 75 50.7
Cpa.g.sc6.134 Carica papaya HOM05D000669 ORTHO05D008810 5.5e-07 57.8 75 49.3
arahy.Tifrunner.gnm1.ann1.CQ7HGG Arachis hypogaea HOM05D000669 ORTHO05D008810 9.4e-07 57.0 70 44.3
COL.COLO4_22052 Corchorus olitorius HOM05D000669 ORTHO05D008810 9.4e-07 57.0 76 47.4
THA.LOC104821286 Tarenaya hassleriana HOM05D000669 ORTHO05D008810 9.4e-07 57.0 75 46.7
Ciclev10026121m.g Citrus clementina HOM05D000669 ORTHO05D008810 1.6e-06 56.2 75 50.7
Manes.02G095500 Manihot esculenta HOM05D000669 ORTHO05D008810 4.7e-06 54.7 41 63.4
BcaNung06645 Brassica carinata HOM05D000669 ORTHO05D008810 8.0e-06 53.9 95 38.9
AUR62004068 Chenopodium quinoa HOM05D000669 ORTHO05D008810 8.0e-06 53.9 77 45.5
VMungo1215G2722 Vigna mungo HOM05D000669 ORTHO05D008810 8.0e-06 53.9 75 42.7


User provided reference genes

Program Settings