Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 3.7e-252 874.4 441 100.0
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 5.9e-250 867.1 444 99.1
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 2.5e-248 861.7 444 98.0
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 2.4e-243 845.1 441 96.8
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 2.9e-241 838.2 457 94.5
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 2.3e-233 812.0 447 93.3
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 1.0e-209 733.4 458 81.7
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 3.0e-209 731.9 459 81.0
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 1.8e-198 696.0 457 78.8
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 9.0e-198 693.7 453 79.0
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 1.5e-197 693.0 440 80.0
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 1.5e-197 693.0 440 80.0
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 3.4e-197 691.8 455 77.8
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 9.9e-197 690.3 453 77.5
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 3.8e-196 688.3 462 76.8
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 8.4e-196 687.2 452 78.1
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 2.1e-194 682.6 466 76.2
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 7.8e-194 680.6 452 78.3
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 5.1e-193 677.9 458 75.8
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 6.6e-193 677.6 393 84.5
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 1.5e-192 676.4 447 77.9
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 5.6e-192 674.5 455 76.5
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 5.6e-192 674.5 447 77.2
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 5.6e-192 674.5 447 77.9
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 9.6e-192 673.7 430 79.1
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 9.6e-192 673.7 449 77.3
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 1.6e-191 672.9 446 78.0
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 2.1e-191 672.5 453 76.2
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 2.8e-191 672.2 457 75.5
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 3.6e-191 671.8 378 86.8
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 3.6e-191 671.8 449 76.8
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 4.8e-191 671.4 452 76.5
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 4.8e-191 671.4 455 76.9
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 6.2e-191 671.0 404 81.9
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 1.1e-190 670.2 441 76.4
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 1.4e-190 669.8 453 75.5
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 1.4e-190 669.8 448 76.3
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 1.8e-190 669.5 447 77.2
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 2.4e-190 669.1 403 82.4
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 9.0e-190 667.2 454 74.7
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 9.0e-190 667.2 403 82.4
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 1.2e-189 666.8 450 75.8
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 2.6e-189 665.6 443 77.7
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 3.4e-189 665.2 387 84.2
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 4.5e-189 664.8 449 75.7
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 4.5e-189 664.8 444 77.9
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 5.8e-189 664.5 455 74.5
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 7.6e-189 664.1 451 75.2
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 9.9e-189 663.7 402 80.8
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 9.9e-189 663.7 445 76.2
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 1.7e-188 662.9 469 74.6
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 2.2e-188 662.5 453 75.9
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 2.9e-188 662.1 453 74.4
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 3.8e-188 661.8 454 76.4
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 8.4e-188 660.6 439 75.9
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 1.1e-187 660.2 397 81.1
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 1.1e-187 660.2 454 74.2
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 1.4e-187 659.8 452 75.9
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.4e-187 659.8 449 75.3
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 2.4e-187 659.1 440 76.1
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 4.2e-187 658.3 445 75.5
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 5.4e-187 657.9 445 75.3
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 5.4e-187 657.9 445 75.3
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 5.4e-187 657.9 442 75.3
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 5.4e-187 657.9 460 75.2
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 7.1e-187 657.5 442 75.3
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 9.3e-187 657.1 451 75.2
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 1.2e-186 656.8 442 76.5
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 1.2e-186 656.8 453 75.5
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 1.6e-186 656.4 445 75.3
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 2.1e-186 656.0 404 80.7
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 2.1e-186 656.0 449 73.7
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 2.7e-186 655.6 443 77.2
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 3.5e-186 655.2 450 75.1
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 4.6e-186 654.8 444 74.8
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 6.0e-186 654.4 457 73.5
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 7.9e-186 654.1 391 82.1
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 7.9e-186 654.1 444 73.6
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 1.3e-185 653.3 442 75.6
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 1.8e-185 652.9 403 80.6
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 3.9e-185 651.7 387 82.9
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 3.9e-185 651.7 441 74.8
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 3.9e-185 651.7 443 75.4
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 5.1e-185 651.4 456 73.9
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 5.1e-185 651.4 443 74.5
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 5.1e-185 651.4 403 80.9
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 6.7e-185 651.0 404 80.2
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 8.7e-185 650.6 375 84.0
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 1.5e-184 649.8 445 74.4
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 1.5e-184 649.8 403 78.9
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 3.3e-184 648.7 438 75.6
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 1.6e-183 646.4 443 75.2
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 3.7e-183 645.2 470 71.7
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 6.2e-183 644.4 444 72.7
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 2.4e-182 642.5 382 80.6
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 3.1e-182 642.1 445 72.4
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.7e-180 636.3 370 84.6
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 2.2e-180 636.0 410 77.3
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 7.9e-178 627.5 431 75.9
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 2.3e-177 625.9 420 73.6
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 1.1e-176 623.6 420 73.3
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 6.9e-174 614.4 392 75.0
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 1.6e-170 603.2 366 78.4
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 2.3e-169 599.4 385 74.0
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 3.0e-169 599.0 385 75.1
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 1.9e-168 596.3 450 70.9
CSS0012363 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 5.7e-168 594.7 328 88.4
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.4e-158 563.5 421 70.3
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 1.2e-157 560.5 390 70.8
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 5.9e-157 558.1 352 77.3
Lsat_1_v5_gn_3_125660 Lactuca sativa HOM05D005052 ORTHO05D006226 2.7e-154 549.3 432 69.7
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 6.1e-154 548.1 372 73.1
Actinidia17421 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.7e-151 540.0 287 90.2
EL10Ac6g15523 Beta vulgaris HOM05D005052 ORTHO05D006226 2.1e-146 523.1 516 56.6
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 2.7e-146 522.7 366 69.7
CDE04G1415 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 6.1e-146 521.5 287 85.4
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 3.0e-137 492.7 396 61.4
Ah.03g149130 Amaranthus hybridus HOM05D005052 ORTHO05D006226 5.0e-132 475.3 344 73.3
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 1.9e-131 473.4 367 68.1
Manes.02G107200 Manihot esculenta HOM05D005052 ORTHO05D006226 1.8e-129 466.8 337 74.5
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 4.0e-129 465.7 363 62.5
SEGI_14262 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 3.6e-122 442.6 289 76.1
Dinv33661 Davidia involucrata HOM05D005052 ORTHO05D006226 7.0e-118 428.3 233 88.4
CDE02G2775 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 1.2e-109 401.0 317 64.7
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 9.5e-107 391.3 450 52.2
SEGI_08539 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 8.1e-98 361.7 224 75.9
CDE02G1558 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 2.4e-89 333.6 256 66.8
RcHm_v2.0_Chr2g0099011 Rosa chinensis HOM05D005052 ORTHO05D006226 3.1e-81 306.6 246 65.9
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 1.3e-79 301.2 192 72.9
TPR.G6592 Trifolium pratense HOM05D005052 ORTHO05D006226 1.0e-76 291.6 273 59.3
Lsat_1_v5_gn_0_46241 Lactuca sativa HOM05D005052 ORTHO05D006226 2.3e-76 290.4 299 46.8
unitig_699.g19702 Utricularia gibba HOM05D005052 ORTHO05D006226 8.4e-71 271.9 161 81.4
Haze_27270 Corylus avellana HOM05D005052 ORTHO05D006226 5.1e-68 262.7 355 43.1
Dinv33662 Davidia involucrata HOM05D005052 ORTHO05D006226 9.0e-57 225.3 207 61.4
Cfa024476 Carpinus fangiana HOM05D003566 ORTHO05D126353 3.8e-55 219.9 340 40.9
Rhsim07G0143100 Rhododendron simsii HOM05D005052 ORTHO05D006226 8.5e-47 192.2 184 59.8
SEGI_40904 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.9e-46 191.0 113 77.0
unitig_699.g19703 Utricularia gibba HOM05D005052 ORTHO05D006226 7.2e-46 189.1 237 49.8
SEGI_17140 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 4.2e-30 136.7 83 74.7
SEGI_34573 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 4.2e-30 136.7 83 74.7
Ah.03g149140 Amaranthus hybridus HOM05D000441 ORTHO05D000340 5.2e-28 129.8 77 77.9
MD02G1126200 Malus domestica HOM05D005052 ORTHO05D006226 4.8e-26 123.2 129 55.8
MD14G1099300 Malus domestica HOM05D005052 ORTHO05D006226 4.8e-26 123.2 129 55.8
DCAR_004721 Daucus carota HOM05D005052 ORTHO05D006226 2.5e-22 110.9 113 52.2
Rhsim07G0135500 Rhododendron simsii HOM05D005052 ORTHO05D006226 2.5e-22 110.9 73 71.2
SEGI_22853 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 3.6e-21 107.1 69 68.1
CDE04G1456 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 5.9e-16 89.7 76 60.5
Rhsim07G0135600 Rhododendron simsii HOM05D005052 ORTHO05D339393 3.1e-09 67.4 56 60.7


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