Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 6.3e-152 540.8 286 100.0
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 1.5e-137 493.0 286 90.9
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 4.8e-136 488.0 284 90.5
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 2.0e-129 466.1 290 85.5
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 8.3e-128 460.7 286 85.7
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 3.1e-106 389.0 279 74.9
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 2.2e-96 356.3 263 73.8
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 6.0e-94 348.2 285 64.9
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 1.0e-93 347.4 262 76.0
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.3e-92 342.4 223 85.2
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 4.3e-92 342.0 283 65.0
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 5.6e-92 341.7 286 62.9
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 4.4e-89 332.0 283 63.6
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 5.8e-89 331.6 286 60.5
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 6.2e-83 311.6 286 59.8
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 8.4e-80 301.2 285 59.6
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 3.2e-79 299.3 282 57.1
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 7.1e-79 298.1 263 60.8
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 2.1e-78 296.6 282 57.4
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 6.0e-78 295.0 282 59.9
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 3.9e-77 292.4 293 54.6
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.3e-76 289.3 212 78.8
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 4.3e-76 288.9 281 53.0
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 5.6e-76 288.5 281 54.4
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 9.6e-76 287.7 281 54.1
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 3.1e-74 282.7 287 56.4
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 6.4e-72 275.0 280 53.2
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 9.3e-71 271.2 282 51.8
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 2.7e-70 269.6 282 53.5
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 3.5e-70 269.2 285 50.2
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 4.6e-70 268.9 281 53.4
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 6.0e-70 268.5 283 51.9
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 6.0e-70 268.5 281 52.0
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 1.8e-69 266.9 281 53.7
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 2.3e-69 266.5 282 54.6
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 2.3e-69 266.5 289 51.6
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 1.1e-68 264.2 282 52.8
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.3e-67 260.8 288 51.0
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 2.8e-67 259.6 279 53.0
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 3.7e-67 259.2 282 52.1
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 4.8e-67 258.8 281 51.6
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 2.4e-66 256.5 281 52.0
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 2.4e-66 256.5 279 49.8
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 4.0e-66 255.8 263 56.7
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 2.0e-65 253.4 279 48.7
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 2.6e-65 253.1 296 50.3
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 4.5e-65 252.3 282 51.8
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 4.5e-65 252.3 281 49.5
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 7.6e-65 251.5 335 46.3
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 1.0e-64 251.1 272 54.0
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 1.7e-64 250.4 282 51.1
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 6.5e-64 248.4 358 44.1
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 6.5e-64 248.4 284 49.3
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 8.4e-64 248.1 263 52.5
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 2.5e-63 246.5 327 46.2
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 3.2e-63 246.1 306 48.0
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 1.2e-62 244.2 285 47.0
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 2.1e-62 243.4 284 46.5
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 3.5e-62 242.7 306 47.7
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 6.7e-61 238.4 301 48.5
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 6.7e-61 238.4 301 48.5
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 2.1e-59 233.4 279 49.5
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 2.8e-59 233.0 311 45.0
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 6.3e-59 231.9 283 47.7
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 8.2e-59 231.5 330 42.7
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 1.1e-58 231.1 282 46.1
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.6e-57 226.5 267 49.1
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 1.7e-56 223.8 318 43.4
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 8.5e-56 221.5 267 46.1
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.6e-54 217.2 281 45.6
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 7.4e-52 208.4 297 43.8
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 9.7e-52 208.0 281 43.8
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.3e-48 197.6 209 53.1
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 2.9e-48 196.4 285 43.2
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 2.5e-47 193.4 163 63.8
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.0e-45 188.0 340 39.4
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 5.1e-45 185.7 281 39.9
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 1.4e-42 177.6 264 40.9
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 6.9e-42 175.3 284 39.8
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 1.2e-41 174.5 247 45.3
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 2.6e-41 173.3 283 38.5
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 6.5e-40 168.7 202 47.5
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 4.2e-39 166.0 282 37.6
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 2.1e-38 163.7 208 46.6
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 1.8e-37 160.6 142 64.1
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 1.1e-36 157.9 124 66.9
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 2.6e-36 156.8 164 54.3
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 4.4e-36 156.0 233 42.1
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.1e-34 151.4 140 57.9
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 4.1e-34 149.4 264 40.9
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 1.2e-33 147.9 128 62.5
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 3.5e-33 146.4 128 60.2
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 7.7e-33 145.2 279 36.9
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 5.5e-31 139.0 126 55.6
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.0e-29 134.8 263 35.4
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 1.4e-29 134.4 112 59.8
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 5.7e-28 129.0 194 39.7
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 5.7e-28 129.0 240 32.9
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 2.8e-27 126.7 193 37.8
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 8.2e-27 125.2 112 56.2
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 1.1e-26 124.8 206 39.3
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 7.0e-26 122.1 110 54.5
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 2.0e-25 120.6 286 31.5
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 2.7e-25 120.2 81 79.0
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 5.9e-25 119.0 109 56.9
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.3e-24 117.9 166 45.8
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.2e-22 111.3 106 50.9
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 1.6e-22 110.9 131 45.8
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 2.3e-21 107.1 101 56.4
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 2.2e-19 100.5 86 55.8
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 4.8e-19 99.4 102 50.0
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 3.5e-17 93.2 58 74.1
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 6.5e-16 89.0 80 60.0
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 1.3e-11 74.7 63 60.3
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 2.2e-11 73.9 55 69.1
Duzib116G0864 Durio zibethinus HOM05D006511 ORTHO05D007567 2.2e-11 73.9 127 37.0
SMO137G0232 Selaginella moellendorffii HOM05D006511 ORTHO05D007567 1.4e-10 71.2 128 33.6
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 7.0e-10 68.9 48 70.8
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 3.5e-09 66.6 56 55.4
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 1.7e-08 64.3 101 37.6
AagrBONN_evm.TU.Sc2ySwM_362.2028 Anthoceros agrestis HOM05D006511 ORTHO05D007567 3.6e-06 56.6 208 25.0


User provided reference genes

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