Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-204 714.9 334 100.0
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-191 672.9 326 96.3
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.8e-186 653.7 326 92.9
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.8e-186 653.7 326 92.9
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.6e-177 624.0 326 92.0
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-174 615.9 324 91.4
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 9.0e-158 560.5 296 90.2
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-134 483.8 337 70.6
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-134 482.6 337 70.3
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-134 481.9 323 74.0
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-133 480.3 337 70.3
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-133 479.9 336 70.2
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-131 473.8 326 72.7
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.9e-131 473.0 337 69.1
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-131 472.6 336 69.9
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 3.5e-130 468.8 337 69.1
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 4.8e-127 458.4 336 69.3
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 1.2e-125 453.8 332 66.0
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 2.5e-120 436.0 330 64.2
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 2.9e-108 396.0 284 69.7
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.5e-108 394.4 284 69.4
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-106 389.4 284 68.3
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 8.0e-106 387.9 333 58.6
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-104 381.7 336 57.4
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-102 375.9 335 56.7
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 5.0e-100 368.6 333 55.6
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.2e-96 357.5 337 56.1
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-96 356.7 331 53.5
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.3e-95 351.7 289 59.9
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 1.6e-93 347.1 325 53.2
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.9e-87 325.5 162 93.2
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-78 297.0 333 47.4
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-78 296.6 327 46.8
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-76 289.7 333 45.9
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-73 280.8 325 45.8
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-73 279.3 326 45.1
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-72 277.7 216 61.6
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.7e-68 263.8 341 45.2
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-68 262.7 328 44.5
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-63 246.1 238 49.6
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-59 233.0 335 42.4
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.6e-59 232.3 230 48.7
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.5e-59 231.5 335 42.1
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.8e-57 225.3 329 41.9
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-56 223.8 169 60.9
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 7.6e-56 221.9 334 40.1
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 9.2e-54 214.9 169 59.8
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-53 213.0 340 43.2
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-53 213.0 340 43.2
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.1e-52 209.1 161 59.6
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 8.6e-52 208.4 340 42.9
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-51 208.0 326 44.5
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-50 204.5 329 43.5
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 7.6e-48 195.3 353 38.2
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-47 193.0 337 37.7
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.9e-47 192.6 201 52.2
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 4.9e-47 192.6 162 57.4
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 8.4e-47 191.8 194 50.0
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.8e-42 176.0 323 38.4
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-40 170.6 258 39.1
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-40 169.9 315 36.5
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-38 164.5 232 47.8
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.1e-38 162.2 324 35.5
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 1.2e-37 161.4 139 56.8
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-36 157.9 270 36.3
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-33 146.4 78 87.2
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-32 144.4 330 33.0
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 9.9e-32 141.7 104 62.5
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-29 133.3 253 36.0
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-28 131.0 101 62.4
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 1.1e-27 128.3 282 35.1
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-27 127.9 170 43.5
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-25 120.2 147 44.9
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-25 119.4 158 44.9
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 4.9e-23 112.8 256 34.0
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-22 111.3 173 36.4
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-22 109.4 82 58.5
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 7.1e-22 109.0 323 30.0
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.6e-21 106.3 137 40.9
RcHm_v2.0_Chr1g0337091 Rosa chinensis HOM05D010677 ORTHO05D012678 4.6e-21 106.3 214 35.0
RcHm_v2.0_Chr1g0337131 Rosa chinensis HOM05D006732 ORTHO05D012678 1.0e-20 105.1 207 36.7
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 3.9e-20 103.2 373 26.3
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.3e-19 100.1 70 62.9
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 4.3e-19 99.8 214 31.8
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 7.4e-19 99.0 211 32.2
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 7.4e-19 99.0 202 38.1
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.3e-18 98.2 251 32.3
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 2.1e-18 97.4 209 31.6
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 4.8e-18 96.3 221 31.2
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-17 94.7 65 63.1
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-17 94.0 118 44.9
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-17 93.6 137 44.5
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 5.3e-17 92.8 267 33.0
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 6.9e-17 92.4 278 28.8
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 9.0e-17 92.0 137 43.8
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.0e-17 92.0 131 41.2
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.0e-17 92.0 131 41.2
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 2.0e-16 90.9 353 26.1
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.0e-16 90.9 349 26.6
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.0e-16 90.9 353 26.1
FAN14G4819 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.6e-16 90.5 276 27.5
FvH4_7g31260 Fragaria vesca HOM05D010677 ORTHO05D012678 1.7e-15 87.8 215 33.0
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 2.2e-15 87.4 218 30.7
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.8e-15 86.7 195 35.4
FAN06G1115 Fragaria x ananassa HOM05D010677 ORTHO05D012678 3.8e-15 86.7 215 32.6
FAN06G1601 Fragaria x ananassa HOM05D010677 ORTHO05D012678 3.8e-15 86.7 215 32.6
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 5.0e-15 86.3 209 33.0
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 5.0e-15 86.3 145 40.7
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 6.5e-15 85.9 173 32.9
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.4e-14 84.7 244 27.9
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 1.4e-14 84.7 332 27.7
FAN03G0822 Fragaria x ananassa HOM05D010677 ORTHO05D012678 4.2e-14 83.2 171 31.0
FvH4_7g16534 Fragaria vesca HOM05D008398 ORTHO05D046322 5.5e-14 82.8 246 31.3
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 2.1e-13 80.9 339 23.9
FAN19G2055 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-13 79.0 76 51.3
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 7.9e-13 79.0 333 27.0
FAN06G3455 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.0e-12 78.6 329 26.7
FAN19G0291 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-12 78.2 191 33.5
FAN10G3231 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.3e-12 77.4 218 28.4
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-12 77.0 103 40.8
FvH4_7g30731 Fragaria vesca HOM05D008398 ORTHO05D035236 8.7e-12 75.5 259 28.6
FAN06G5012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.1e-11 75.1 205 30.2
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.1e-11 75.1 194 30.9
FAN06G1253 Fragaria x ananassa HOM05D008398 ORTHO05D035236 1.5e-11 74.7 224 29.0
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 1.9e-11 74.3 168 35.1
FAN14G2930 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.5e-11 73.9 250 27.2
FAN06G1826 Fragaria x ananassa HOM05D008398 ORTHO05D035236 4.3e-11 73.2 259 28.2
FAN01G1167 Fragaria x ananassa HOM05D000122 ORTHO05D000139 5.7e-11 72.8 225 29.8
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 7.4e-11 72.4 275 29.1
FAN03G3290 Fragaria x ananassa HOM05D005400 ORTHO05D006668 2.2e-10 70.9 243 26.7
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-10 70.9 77 45.5
FvH4_7g31310 Fragaria vesca HOM05D000122 ORTHO05D012678 4.8e-10 69.7 146 33.6
FvH4_1g04910 Fragaria vesca HOM05D006732 ORTHO05D046085 6.3e-10 69.3 54 55.6
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.2e-10 68.9 145 31.7
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-09 68.2 55 52.7
FAN19G2861 Fragaria x ananassa HOM05D006732 ORTHO05D046085 1.4e-09 68.2 51 58.8
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 2.4e-09 67.4 178 30.3
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 3.1e-09 67.0 194 27.3
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 4.1e-09 66.6 178 31.5
FvH4_7g28941 Fragaria vesca HOM05D006732 ORTHO05D005682 5.3e-09 66.2 132 33.3
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 5.3e-09 66.2 178 31.5
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 5.3e-09 66.2 141 33.3
FvH4_1g04520 Fragaria vesca HOM05D006732 ORTHO05D005682 9.1e-09 65.5 84 39.3
FvH4_6g28541 Fragaria vesca HOM05D008398 ORTHO05D005682 1.7e-07 61.2 158 31.0
FvH4_4g06201 Fragaria vesca HOM05D006732 ORTHO05D005682 2.5e-06 57.4 106 41.5
FAN19G0789 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.4e-06 55.5 32 84.4


User provided reference genes

Program Settings