Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G0432 Fragaria x ananassa HOM05D016497 ORTHO05D019154 2.9e-204 714.9 337 100.0
FvH4_1g21382 Fragaria vesca HOM05D016497 ORTHO05D019154 3.1e-150 535.4 329 80.9
FAN23G0814 Fragaria x ananassa HOM05D016497 ORTHO05D019154 8.1e-98 361.3 186 91.4
FAN27G1149 Fragaria x ananassa HOM05D016497 ORTHO05D019154 2.3e-97 359.8 186 90.9
FAN13G3118 Fragaria x ananassa HOM05D016497 ORTHO05D019154 4.9e-95 352.1 184 90.2
FAN26G0292 Fragaria x ananassa HOM05D016497 ORTHO05D019154 4.9e-95 352.1 184 90.2
FvH4_1g29794 Fragaria vesca HOM05D016497 ORTHO05D019154 2.1e-90 336.7 171 92.4
FvH4_2g35574 Fragaria vesca HOM05D016497 ORTHO05D019154 1.7e-63 247.3 186 68.8
FvH4_1g29795 Fragaria vesca HOM05D009149 ORTHO05D003639 3.1e-49 199.9 139 72.7
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 4.8e-42 176.0 348 35.9
RcHm_v2.0_Chr1g0350201 Rosa chinensis HOM05D009149 ORTHO05D003639 6.5e-39 165.6 348 33.9
RcHm_v2.0_Chr2g0105541 Rosa chinensis HOM05D009149 ORTHO05D003639 8.5e-39 165.2 348 33.9
FvH4_2g35573 Fragaria vesca HOM05D009149 ORTHO05D003639 1.4e-38 164.5 114 73.7
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 1.4e-38 164.5 348 33.9
RcHm_v2.0_Chr6g0291271 Rosa chinensis HOM05D009149 ORTHO05D003639 3.2e-38 163.3 349 33.5
RcHm_v2.0_Chr2g0131351 Rosa chinensis HOM05D009149 ORTHO05D003639 6.3e-34 149.1 311 33.4
RcHm_v2.0_Chr4g0410321 Rosa chinensis HOM05D009149 ORTHO05D003639 6.3e-34 149.1 305 34.8
FvH4_4g18552 Fragaria vesca HOM05D009149 ORTHO05D003639 2.5e-30 137.1 262 35.9
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 4.1e-25 119.8 318 30.2
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 4.1e-25 119.8 318 30.2
Solyc05g010817.1 Solanum lycopersicum HOM05D008778 ORTHO05D003639 1.2e-24 118.2 303 31.0
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.3e-23 114.8 334 27.5
FvH4_5g16044 Fragaria vesca HOM05D060084 ORTHO05D046536 2.9e-23 113.6 280 28.6
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 3.2e-22 110.2 261 32.6
Peaxi162Scf00820g00119 Petunia axillaris HOM05D008778 ORTHO05D003639 4.2e-22 109.8 281 31.0
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 9.4e-22 108.6 258 32.9
PGSC0003DMG400002681 Solanum tuberosum HOM05D008778 ORTHO05D003639 9.4e-22 108.6 280 29.3
Cc00_g19240 Coffea canephora HOM05D009149 ORTHO05D003639 1.2e-21 108.2 324 28.4
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 1.2e-21 108.2 258 32.9
RcHm_v2.0_Chr7g0239611 Rosa chinensis HOM05D009149 ORTHO05D003639 1.6e-21 107.8 228 33.8
RcHm_v2.0_Chr2g0138191 Rosa chinensis HOM05D008702 ORTHO05D003639 3.6e-21 106.7 256 32.0
RcHm_v2.0_Chr2g0116581 Rosa chinensis HOM05D008702 ORTHO05D003639 1.0e-20 105.1 258 32.2
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 1.4e-20 104.8 276 29.7
RcHm_v2.0_Chr1g0321631 Rosa chinensis HOM05D008702 ORTHO05D003639 1.4e-20 104.8 244 33.2
Nitab4.5_0001698g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.5e-19 101.3 272 29.8
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 2.6e-19 100.5 305 26.2
Oeu051913.1 Olea europaea HOM05D007843 ORTHO05D003639 7.5e-19 99.0 231 30.3
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 7.5e-19 99.0 272 28.7
Nitab4.5_0000663g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 9.7e-19 98.6 272 28.7
RcHm_v2.0_Chr4g0419521 Rosa chinensis HOM05D009149 ORTHO05D003639 1.3e-18 98.2 122 44.3
Oeu057837.1 Olea europaea HOM05D007843 ORTHO05D003639 3.7e-18 96.7 285 28.4
Oeu062982.1 Olea europaea HOM05D007843 ORTHO05D003639 1.8e-17 94.4 283 27.2
Oeu019035.1 Olea europaea HOM05D007843 ORTHO05D003639 2.4e-17 94.0 289 28.0
Nitab4.5_0001698g0040 Nicotiana tabacum HOM05D008778 ORTHO05D003639 4.1e-17 93.2 271 26.9
Oeu026044.1 Olea europaea HOM05D007843 ORTHO05D003639 5.3e-17 92.8 231 29.9
Oeu054401.1 Olea europaea HOM05D007843 ORTHO05D003639 5.3e-17 92.8 287 27.2
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 7.0e-17 92.4 272 27.2
Oeu001108.1 Olea europaea HOM05D007843 ORTHO05D003639 1.6e-16 91.3 303 27.1
Oeu009347.1 Olea europaea HOM05D007843 ORTHO05D003639 1.6e-16 91.3 231 29.0
Oeu033711.1 Olea europaea HOM05D007843 ORTHO05D003639 1.6e-16 91.3 303 26.4
RcHm_v2.0_Chr1g0320431 Rosa chinensis HOM05D008702 ORTHO05D003639 2.0e-16 90.9 218 32.6
Oeu063182.1 Olea europaea HOM05D007843 ORTHO05D003639 2.7e-16 90.5 289 27.3
QL01p013702 Quercus lobata HOM05D009149 ORTHO05D003639 2.7e-16 90.5 248 27.0
FvH4_3g26742 Fragaria vesca HOM05D016656 ORTHO05D003639 3.5e-16 90.1 279 28.7
Oeu026206.1 Olea europaea HOM05D007843 ORTHO05D003639 3.5e-16 90.1 285 27.4
Oeu063102.1 Olea europaea HOM05D007843 ORTHO05D003639 3.5e-16 90.1 243 28.8
Oeu021877.1 Olea europaea HOM05D007843 ORTHO05D003639 5.9e-16 89.4 231 29.0
Oeu040933.1 Olea europaea HOM05D007843 ORTHO05D003639 1.0e-15 88.6 227 29.1
Oeu050487.1 Olea europaea HOM05D007843 ORTHO05D003639 1.7e-15 87.8 247 28.3
Oeu030519.2 Olea europaea HOM05D007843 ORTHO05D003639 3.8e-15 86.7 291 26.1
Oeu044673.1 Olea europaea HOM05D007843 ORTHO05D003639 3.8e-15 86.7 243 29.6
Peaxi162Scf00169g01112 Petunia axillaris HOM05D008778 ORTHO05D003639 3.8e-15 86.7 277 26.4
Oeu043087.1 Olea europaea HOM05D007843 ORTHO05D003639 5.0e-15 86.3 243 28.4
RcHm_v2.0_Chr4g0419511 Rosa chinensis HOM05D009149 ORTHO05D003639 5.0e-15 86.3 143 37.1
Oeu038439.1 Olea europaea HOM05D007843 ORTHO05D003639 8.5e-15 85.5 286 26.2
Oeu056684.1 Olea europaea HOM05D007843 ORTHO05D003639 1.5e-14 84.7 189 31.7
FAN25G0588 Fragaria x ananassa HOM05D016656 ORTHO05D003639 3.2e-14 83.6 201 32.3
Oeu013418.1 Olea europaea HOM05D007843 ORTHO05D003639 5.5e-14 82.8 285 27.0
RcHm_v2.0_Chr5g0049171 Rosa chinensis HOM05D016656 ORTHO05D003639 7.2e-14 82.4 355 26.5
Oeu018520.1 Olea europaea HOM05D007843 ORTHO05D003639 3.6e-13 80.1 245 28.6
Nitab4.5_0007634g0020 Nicotiana tabacum HOM05D008778 ORTHO05D003639 8.8e-12 75.5 219 29.7
Oeu002287.1 Olea europaea HOM05D007843 ORTHO05D003639 1.2e-11 75.1 223 28.3
Oeu026105.1 Olea europaea HOM05D007843 ORTHO05D003639 1.2e-11 75.1 219 27.4
FAN04G0614 Fragaria x ananassa HOM05D008702 ORTHO05D003639 2.6e-11 73.9 188 30.9
RcHm_v2.0_Chr1g0321621 Rosa chinensis HOM05D008702 ORTHO05D003639 2.6e-11 73.9 155 36.8
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.3e-10 71.6 107 35.5
Oeu040104.1 Olea europaea HOM05D007843 ORTHO05D003639 2.2e-10 70.9 178 29.2
CSS0049410 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 3.7e-10 70.1 172 29.1
CSS0017117 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 4.8e-10 69.7 172 29.1
CSS0041949 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 1.4e-09 68.2 253 25.7
CSS0024724 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 3.1e-09 67.0 170 28.2
CSS0022979 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 4.1e-09 66.6 240 25.8
Peaxi162Scf00820g00045 Petunia axillaris HOM05D008778 ORTHO05D003639 1.2e-08 65.1 280 25.4
CSS0004912 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 2.7e-08 63.9 171 27.5
RcHm_v2.0_Chr1g0320711 Rosa chinensis HOM05D008702 ORTHO05D003639 2.7e-08 63.9 62 54.8
RcHm_v2.0_Chr5g0004321 Rosa chinensis HOM05D008702 ORTHO05D003639 2.7e-08 63.9 78 47.4
RcHm_v2.0_Chr5g0076791 Rosa chinensis HOM05D025191 ORTHO05D026112 2.9e-07 60.5 194 25.3
FAN18G2128 Fragaria x ananassa HOM05D060084 ORTHO05D046536 6.5e-07 59.3 95 30.5
Dinv06719 Davidia involucrata HOM05D039347 ORTHO05D025265 1.5e-06 58.2 107 33.6
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 1.9e-06 57.8 99 32.3
AUR62009156 Chenopodium quinoa HOM05D020966 ORTHO05D023391 3.2e-06 57.0 335 22.4
Oeu005345.1 Olea europaea HOM05D007843 ORTHO05D003639 3.2e-06 57.0 99 32.3
Oeu000171.6 Olea europaea HOM05D007843 ORTHO05D003639 4.2e-06 56.6 115 28.7
Oeu028381.1 Olea europaea HOM05D007843 ORTHO05D003639 7.2e-06 55.8 101 31.7
Oeu064491.1 Olea europaea HOM05D007843 ORTHO05D003639 9.5e-06 55.5 154 28.6


User provided reference genes

Program Settings