Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G0368 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.9e-57 224.9 107 100.0
FvH4_5g04911 Fragaria vesca HOM05D000003 ORTHO05D006737 2.9e-17 92.0 89 52.8
FAN18G0759 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.8e-17 91.7 80 55.0
RcHm_v2.0_Chr5g0040041 Rosa chinensis HOM05D000003 ORTHO05D006737 8.4e-17 90.5 81 50.6
FAN14G5848 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.4e-16 89.0 74 58.1
FAN13G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.5e-16 87.8 79 51.9
FAN18G0619 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.7e-15 85.5 79 50.6
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 3.5e-15 85.1 80 48.8
RcHm_v2.0_Chr2g0125521 Rosa chinensis HOM05D000003 ORTHO05D006737 3.5e-15 85.1 79 49.4
FvH4_4g10782 Fragaria vesca HOM05D000003 ORTHO05D006737 4.6e-15 84.7 89 52.8
FAN14G2822 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.6e-15 84.7 80 50.0
FvH4_6g08250 Fragaria vesca HOM05D000003 ORTHO05D006737 6.0e-15 84.3 80 50.0
FAN11G0642 Fragaria x ananassa HOM05D000355 ORTHO05D000227 6.0e-15 84.3 80 51.2
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 7.9e-15 84.0 80 46.2
FvH4_3g25361 Fragaria vesca HOM05D000003 ORTHO05D006737 1.3e-14 83.2 80 51.2
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 1.3e-14 83.2 90 45.6
RcHm_v2.0_Chr4g0397511 Rosa chinensis HOM05D000003 ORTHO05D006737 1.3e-14 83.2 80 46.2
RcHm_v2.0_Chr5g0031961 Rosa chinensis HOM05D000003 ORTHO05D006737 6.7e-14 80.9 80 45.0
FAN08G0755 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.9e-13 79.3 83 48.2
FAN01G2975 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.7e-12 75.1 67 55.2
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 6.2e-12 74.3 71 50.7
FAN20G2266 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.2e-12 73.9 80 46.2
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.8e-11 72.8 65 53.8
RcHm_v2.0_Chr1g0348191 Rosa chinensis HOM05D000003 ORTHO05D006737 1.8e-11 72.8 97 43.3
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 1.8e-11 72.8 48 66.7
FvH4_5g01660 Fragaria vesca HOM05D000003 ORTHO05D006737 3.1e-11 72.0 67 53.7
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 5.3e-11 71.2 61 54.1
FvH4_6g32941 Fragaria vesca HOM05D000003 ORTHO05D006737 9.0e-11 70.5 74 48.6
FvH4_4g12942 Fragaria vesca HOM05D001338 ORTHO05D001239 2.6e-10 68.9 56 60.7
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 2.6e-10 68.9 65 53.8
FAN12G2468 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.6e-10 67.4 59 52.5
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 1.0e-09 67.0 89 41.6
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 1.0e-09 67.0 83 39.8
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 1.3e-09 66.6 83 39.8
FvH4_5g01582 Fragaria vesca HOM05D000003 ORTHO05D006737 1.3e-09 66.6 62 50.0
RcHm_v2.0_Chr6g0260491 Rosa chinensis HOM05D000003 ORTHO05D006737 1.7e-09 66.2 85 42.4
FvH4_4g01552 Fragaria vesca HOM05D000003 ORTHO05D006737 3.8e-09 65.1 75 42.7
FAN12G3592 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.8e-09 65.1 59 50.8
FAN09G3474 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.1e-08 63.5 96 35.4
RcHm_v2.0_Chr2g0118121 Rosa chinensis HOM05D000003 ORTHO05D006737 1.9e-08 62.8 63 36.5
RcHm_v2.0_Chr5g0004021 Rosa chinensis HOM05D000003 ORTHO05D006737 2.5e-08 62.4 69 43.5
RcHm_v2.0_Chr4g0395671 Rosa chinensis HOM05D000003 ORTHO05D006737 7.1e-08 60.8 84 39.3
FAN01G2436 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.5e-07 58.5 74 41.9
FvH4_3g30681 Fragaria vesca HOM05D000003 ORTHO05D000006 4.6e-07 58.2 75 40.0
FAN07G0617 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.3e-06 55.8 71 42.3
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 2.3e-06 55.8 70 41.4
FAN25G3140 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.0e-06 55.5 61 37.7
FAN14G3227 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.9e-06 55.1 62 43.5
FvH4_6g36441 Fragaria vesca HOM05D000003 ORTHO05D019158 5.1e-06 54.7 90 36.7
FAN01G1087 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.7e-06 53.9 71 43.7
RcHm_v2.0_Chr7g0176911 Rosa chinensis HOM05D000003 ORTHO05D006737 8.7e-06 53.9 61 37.7


User provided reference genes

Program Settings