Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 1.4e-85 319.7 173 100.0
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.4e-85 319.7 173 100.0
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.4e-85 319.7 173 100.0
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.2e-83 312.4 173 97.7
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 8.4e-83 310.5 173 97.7
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 3.3e-71 271.9 172 89.0
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 3.8e-59 231.9 175 74.3
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 8.4e-59 230.7 175 75.4
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.9e-58 229.6 173 74.0
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 4.2e-58 228.4 175 74.9
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 5.5e-58 228.0 175 72.0
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 4.6e-57 224.9 175 74.3
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 7.9e-57 224.2 173 72.8
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.3e-56 222.6 175 73.7
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 8.7e-56 220.7 174 72.4
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 8.7e-56 220.7 174 73.0
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 8.7e-56 220.7 175 70.9
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.5e-55 219.9 175 71.4
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 2.5e-55 219.2 175 72.0
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 3.3e-55 218.8 176 71.6
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 3.3e-55 218.8 174 72.4
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 4.3e-55 218.4 176 71.6
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 9.6e-55 217.2 174 70.7
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 2.1e-54 216.1 175 69.7
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 2.8e-54 215.7 175 69.7
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 4.8e-54 214.9 175 69.1
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 6.2e-54 214.5 175 69.7
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 8.2e-54 214.2 175 68.0
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 1.4e-53 213.4 175 69.1
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 1.4e-53 213.4 175 69.1
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.4e-53 213.4 175 69.7
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.4e-53 213.4 175 69.7
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 1.4e-53 213.4 175 69.7
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.4e-53 213.4 175 69.7
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.8e-53 213.0 173 71.1
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.8e-53 213.0 173 68.8
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.4e-53 212.6 175 69.1
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 2.4e-53 212.6 175 68.0
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 4.1e-53 211.8 171 71.3
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 9.0e-53 210.7 175 70.3
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.5e-52 209.9 175 70.9
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.0e-52 209.5 175 68.6
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.6e-52 209.1 175 66.9
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 2.6e-52 209.1 178 69.7
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 3.4e-52 208.8 179 67.0
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 1.7e-51 206.5 191 64.4
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 2.9e-51 205.7 173 67.6
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 2.9e-51 205.7 175 65.7
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 5.0e-51 204.9 175 65.7
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 5.0e-51 204.9 175 67.4
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 8.4e-51 204.1 175 65.1
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 8.4e-51 204.1 203 61.1
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.9e-50 203.0 175 65.7
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.5e-50 202.6 175 65.7
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 7.1e-50 201.1 174 63.2
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 1.2e-49 200.3 174 63.2
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 2.7e-49 199.1 174 64.9
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 3.5e-49 198.7 173 63.6
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 6.1e-49 198.0 173 64.7
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 7.9e-49 197.6 174 62.6
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 7.9e-49 197.6 174 62.6
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 1.0e-48 197.2 174 65.5
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.3e-48 196.8 174 62.6
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.9e-48 195.3 174 65.5
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 6.7e-48 194.5 177 61.6
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 8.7e-48 194.1 147 73.5
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.1e-47 193.7 175 63.4
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.5e-47 193.4 173 61.8
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 2.5e-47 192.6 173 64.2
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 4.3e-47 191.8 174 60.3
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.3e-46 190.3 173 64.7
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.6e-46 189.9 174 63.8
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 3.7e-46 188.7 174 62.1
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 4.8e-46 188.3 175 60.6
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 4.8e-46 188.3 173 63.0
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 8.2e-46 187.6 173 65.3
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.1e-45 187.2 174 62.6
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.1e-45 187.2 174 62.6
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.1e-45 187.2 174 62.6
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.1e-45 187.2 174 62.6
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.4e-45 186.8 174 64.4
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.8e-45 186.4 174 62.6
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 1.8e-45 186.4 171 60.2
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 2.4e-45 186.0 173 64.7
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 2.4e-45 186.0 173 64.7
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 2.4e-45 186.0 174 63.2
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 3.1e-45 185.7 172 64.0
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 3.1e-45 185.7 180 62.2
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 4.1e-45 185.3 174 62.6
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 5.3e-45 184.9 175 60.0
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 9.0e-45 184.1 175 60.0
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.2e-44 183.7 169 63.9
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.0e-44 183.0 171 64.3
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 2.6e-44 182.6 173 60.1
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.5e-44 181.8 147 70.7
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.7e-43 179.9 159 65.4
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 5.0e-43 178.3 171 59.6
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 5.5e-42 174.9 193 54.4
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 7.2e-42 174.5 173 56.1
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 9.4e-42 174.1 147 63.9
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.2e-41 173.7 229 48.9
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 1.6e-41 173.3 179 58.7
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 4.6e-41 171.8 166 57.8
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 7.9e-41 171.0 134 70.9
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.0e-40 170.6 145 64.1
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 2.3e-40 169.5 197 52.8
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.2e-36 157.1 139 64.0
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.6e-33 145.6 141 55.3
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 6.1e-33 144.8 138 59.4
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 9.7e-31 137.5 142 51.4
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 1.7e-30 136.7 138 63.0
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 3.7e-30 135.6 118 65.3
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 2.4e-29 132.9 116 62.1
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 5.3e-29 131.7 140 58.6
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 4.5e-28 128.6 143 51.0
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 7.7e-28 127.9 128 59.4
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 7.7e-28 127.9 68 100.0
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 3.8e-27 125.6 114 61.4
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.1e-26 124.0 128 57.0
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.5e-23 113.6 144 45.1
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.2e-20 104.0 103 52.4
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 2.2e-19 99.8 111 49.5
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.0e-15 86.7 122 45.1
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.2e-12 77.4 75 57.3
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 3.7e-06 55.8 66 51.5


User provided reference genes

Program Settings