Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G0008 Fragaria x ananassa HOM05D000030 ORTHO05D013601 1.7e-111 406.0 205 100.0
FvH4_c5g00011 Fragaria vesca HOM05D000030 ORTHO05D013601 5.3e-76 288.1 202 75.7
FvH4_5g32181 Fragaria vesca HOM05D000030 ORTHO05D013601 1.5e-75 286.6 201 74.6
FAN22G0310 Fragaria x ananassa HOM05D000030 ORTHO05D013601 2.6e-75 285.8 193 78.8
FvH4_6g30963 Fragaria vesca HOM05D000030 ORTHO05D013601 1.7e-74 283.1 206 74.3
FvH4_4g10395 Fragaria vesca HOM05D000030 ORTHO05D000009 4.3e-70 268.5 197 71.1
FAN11G3199 Fragaria x ananassa HOM05D000030 ORTHO05D013601 7.4e-70 267.7 189 77.2
FvH4_2g05022 Fragaria vesca HOM05D000030 ORTHO05D000009 9.6e-70 267.3 197 71.1
FvH4_6g28381 Fragaria vesca HOM05D000030 ORTHO05D013601 6.2e-69 264.6 197 72.1
FAN11G2172 Fragaria x ananassa HOM05D000030 ORTHO05D013601 2.9e-66 255.8 187 72.2
FAN12G0141 Fragaria x ananassa HOM05D000030 ORTHO05D013601 3.7e-61 238.8 165 72.7
FAN02G1203 Fragaria x ananassa HOM05D000030 ORTHO05D013601 6.9e-60 234.6 156 81.4
FAN12G0238 Fragaria x ananassa HOM05D000030 ORTHO05D013601 2.6e-43 179.5 185 58.4
FvH4_4g07681 Fragaria vesca HOM05D000030 ORTHO05D013601 5.5e-41 171.8 152 63.2
FvH4_3g19350 Fragaria vesca HOM05D000026 ORTHO05D000127 3.0e-31 139.4 160 51.9
FAN08G2044 Fragaria x ananassa HOM05D000030 ORTHO05D013601 2.9e-26 122.9 86 79.1
FAN27G2141 Fragaria x ananassa HOM05D000030 ORTHO05D013601 5.0e-26 122.1 86 74.4
FvH4_1g21452 Fragaria vesca HOM05D000030 ORTHO05D000031 6.1e-24 115.2 65 90.8
FAN24G3227 Fragaria x ananassa HOM05D000030 ORTHO05D013601 6.1e-24 115.2 93 64.5
FAN02G2917 Fragaria x ananassa HOM05D000030 ORTHO05D045505 2.2e-21 106.7 75 76.0
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 1.6e-16 90.5 113 41.6
RcHm_v2.0_Chr6g0251881 Rosa chinensis HOM05D000030 ORTHO05D000009 1.0e-15 87.8 105 42.9
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 4.0e-15 85.9 150 34.0
RcHm_v2.0_Chr3g0496331 Rosa chinensis HOM05D000030 ORTHO05D000009 4.0e-15 85.9 109 40.4
FvH4_3g17731 Fragaria vesca HOM05D000030 ORTHO05D000031 8.8e-15 84.7 107 40.2
FvH4_6g25073 Fragaria vesca HOM05D000030 ORTHO05D045505 3.4e-14 82.8 64 68.8
FvH4_4g08573 Fragaria vesca HOM05D000030 ORTHO05D000031 7.5e-14 81.6 191 34.0
FvH4_1g29581 Fragaria vesca HOM05D000030 ORTHO05D000031 1.7e-13 80.5 87 43.7
FvH4_4g00331 Fragaria vesca HOM05D000030 ORTHO05D196507 2.8e-13 79.7 57 73.7
FvH4_6g32751 Fragaria vesca HOM05D000030 ORTHO05D020648 2.8e-13 79.7 160 35.0
FvH4_3g32841 Fragaria vesca HOM05D000030 ORTHO05D020648 4.9e-13 79.0 160 35.0
FvH4_1g17901 Fragaria vesca HOM05D000030 ORTHO05D000031 1.1e-12 77.8 91 40.7
FvH4_2g26902 Fragaria vesca HOM05D000030 ORTHO05D000009 5.4e-12 75.5 95 37.9
Lj2C73T8 Lonicera japonica HOM05D011311 ORTHO05D000009 9.2e-12 74.7 102 37.3
Lj5P369T32 Lonicera japonica HOM05D011311 ORTHO05D000009 1.6e-11 73.9 121 35.5
FvH4_4g16142 Fragaria vesca HOM05D000030 ORTHO05D000009 7.8e-11 71.6 101 40.6
Lj3P609T9 Lonicera japonica HOM05D011311 ORTHO05D000009 1.0e-10 71.2 128 32.8
Lj8P480T12 Lonicera japonica HOM05D011311 ORTHO05D000009 1.3e-10 70.9 102 36.3
FAN24G0049 Fragaria x ananassa HOM05D000030 ORTHO05D013601 1.7e-10 70.5 74 60.8
FAN20G2390 Fragaria x ananassa HOM05D000030 ORTHO05D020648 2.9e-10 69.7 70 48.6
Lj1P505T9 Lonicera japonica HOM05D011311 ORTHO05D000009 2.9e-10 69.7 121 35.5
Lju3616C0T1 Lonicera japonica HOM05D011311 ORTHO05D000009 2.9e-10 69.7 121 35.5
FAN22G0785 Fragaria x ananassa HOM05D000030 ORTHO05D020648 5.0e-10 68.9 129 37.2
RcHm_v2.0_Chr7g0235391 Rosa chinensis HOM05D011311 ORTHO05D020648 1.5e-09 67.4 130 33.1
SGA_v2.0_scaffold2G01199 Striga asiatica HOM05D000030 ORTHO05D000009 7.3e-09 65.1 124 30.6
Lj5P277T26 Lonicera japonica HOM05D011311 ORTHO05D000009 8.0e-08 61.6 121 33.1
RcHm_v2.0_Chr5g0016291 Rosa chinensis HOM05D000030 ORTHO05D000009 8.0e-08 61.6 103 35.0
Lj3P1011T16 Lonicera japonica HOM05D011311 ORTHO05D000009 1.0e-07 61.2 100 33.0
FAN07G0457 Fragaria x ananassa HOM05D011311 ORTHO05D000009 4.0e-07 59.3 100 37.0
RcHm_v2.0_Chr4g0391261 Rosa chinensis HOM05D000030 ORTHO05D000009 3.4e-06 56.2 71 36.6
FAN02G0273 Fragaria x ananassa HOM05D000030 ORTHO05D013601 4.4e-06 55.8 66 54.5
CANSAT80G2716 Cannabis sativa HOM05D000030 ORTHO05D000009 7.5e-06 55.1 98 36.7


User provided reference genes

Program Settings