Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 4.9e-90 334.7 203 100.0
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.8e-89 332.8 203 99.5
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.8e-85 318.9 203 97.0
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 7.5e-83 310.8 203 95.1
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 5.4e-81 304.7 203 93.6
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.4e-65 253.4 203 81.8
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 5.2e-60 235.0 209 75.1
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 4.8e-53 211.8 199 70.9
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 9.0e-52 207.6 177 77.4
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 1.2e-51 207.2 201 70.1
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 1.5e-51 206.8 209 70.3
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 2.0e-51 206.5 200 71.0
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 2.0e-51 206.5 205 68.8
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 5.8e-51 204.9 183 72.7
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 8.4e-50 201.1 185 73.5
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 8.4e-50 201.1 186 74.7
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.4e-49 200.3 199 70.4
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 1.4e-49 200.3 199 70.4
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 2.4e-49 199.5 178 73.0
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 2.4e-49 199.5 165 79.4
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 3.2e-49 199.1 204 67.2
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 3.2e-49 199.1 210 67.6
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 4.2e-49 198.7 195 68.2
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 5.4e-49 198.4 182 72.0
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 7.1e-49 198.0 203 67.5
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 7.1e-49 198.0 204 68.1
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 1.6e-48 196.8 181 72.4
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 2.7e-48 196.1 196 68.4
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 3.5e-48 195.7 198 68.7
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 3.5e-48 195.7 186 71.0
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 7.9e-48 194.5 203 66.5
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 1.3e-47 193.7 182 72.0
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 1.7e-47 193.4 181 70.2
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 3.0e-47 192.6 173 74.0
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 3.0e-47 192.6 178 71.3
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 3.0e-47 192.6 173 74.6
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 3.9e-47 192.2 158 77.8
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 3.9e-47 192.2 175 73.7
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 8.7e-47 191.0 204 66.7
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 1.1e-46 190.7 173 72.8
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 1.1e-46 190.7 201 67.2
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 1.5e-46 190.3 158 77.8
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 1.5e-46 190.3 158 77.8
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 1.5e-46 190.3 199 66.8
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 1.9e-46 189.9 207 64.7
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 3.3e-46 189.1 182 70.3
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 3.3e-46 189.1 182 70.3
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 4.3e-46 188.7 208 65.4
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 4.3e-46 188.7 199 66.3
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 4.3e-46 188.7 175 73.7
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 5.6e-46 188.3 182 69.8
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 7.3e-46 188.0 173 72.8
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 7.3e-46 188.0 173 71.7
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 7.3e-46 188.0 173 71.7
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 7.3e-46 188.0 158 75.9
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 7.3e-46 188.0 184 69.0
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 7.3e-46 188.0 181 70.7
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 7.3e-46 188.0 188 66.5
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 9.6e-46 187.6 183 69.4
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.3e-45 187.2 166 74.1
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.6e-45 186.8 157 77.1
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 1.6e-45 186.8 195 68.2
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 2.1e-45 186.4 158 74.7
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 2.1e-45 186.4 154 78.6
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 2.8e-45 186.0 173 70.5
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 2.8e-45 186.0 173 72.3
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 2.8e-45 186.0 207 64.7
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 4.8e-45 185.3 173 72.8
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 4.8e-45 185.3 193 66.8
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 8.1e-45 184.5 200 65.0
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 1.4e-44 183.7 180 68.3
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 1.8e-44 183.3 149 79.9
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 2.4e-44 183.0 203 65.0
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 3.1e-44 182.6 203 64.0
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 4.0e-44 182.2 147 81.0
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 5.3e-44 181.8 168 72.6
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 5.3e-44 181.8 180 65.6
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 9.0e-44 181.0 175 70.9
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 9.0e-44 181.0 173 69.9
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 2.0e-43 179.9 154 75.3
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 2.6e-43 179.5 149 78.5
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 2.6e-43 179.5 157 74.5
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 3.4e-43 179.1 202 63.9
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 4.5e-43 178.7 150 78.0
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 4.5e-43 178.7 198 64.6
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 5.8e-43 178.3 196 64.8
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 7.6e-43 177.9 148 79.7
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 1.7e-42 176.8 199 62.8
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 2.2e-42 176.4 192 64.6
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 4.9e-42 175.3 161 72.0
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 6.4e-42 174.9 203 63.5
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 5.5e-41 171.8 161 69.6
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 5.5e-41 171.8 203 60.6
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 5.5e-41 171.8 171 69.6
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 5.5e-41 171.8 200 63.0
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 9.3e-41 171.0 168 65.5
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 9.3e-41 171.0 168 65.5
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 1.6e-40 170.2 167 67.1
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 3.0e-39 166.0 156 69.9
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 8.7e-39 164.5 185 61.1
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 2.5e-38 162.9 203 61.1
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 9.6e-38 161.0 161 68.9
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 1.1e-36 157.5 179 63.7
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 5.3e-36 155.2 146 74.7
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 6.9e-36 154.8 154 70.1
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 2.0e-35 153.3 199 59.8
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 1.7e-34 150.2 154 63.6
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 5.3e-28 128.6 151 62.3
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 6.5e-26 121.7 210 48.1
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 3.2e-25 119.4 163 58.9
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.6e-24 117.1 109 61.5
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 5.1e-23 112.1 150 58.7
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 1.4e-20 104.0 163 54.0
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 1.4e-20 104.0 122 54.9
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 7.7e-19 98.2 140 57.1
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 2.9e-18 96.3 110 59.1
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 5.0e-18 95.5 210 43.8
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.4e-17 94.0 117 60.7
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 3.2e-17 92.8 70 62.9
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 9.4e-09 64.7 111 48.6
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 3.9e-07 59.3 151 44.4


User provided reference genes

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