Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.5e-78 296.2 154 100.0
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 3.0e-76 288.5 154 98.1
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.1e-73 278.5 155 92.9
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 2.0e-72 275.8 154 92.9
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 8.0e-69 263.8 155 91.6
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 1.6e-61 239.6 154 79.9
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 8.6e-55 217.2 157 70.1
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 6.0e-48 194.5 155 65.8
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 4.0e-44 181.8 158 58.2
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 8.9e-44 180.6 158 58.9
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 4.4e-43 178.3 165 60.0
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 1.7e-42 176.4 162 61.1
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 2.2e-42 176.0 164 60.4
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 3.7e-42 175.3 159 55.3
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 4.9e-42 174.9 159 55.3
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 8.3e-42 174.1 159 55.3
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 1.6e-40 169.9 165 55.8
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.6e-40 169.9 158 56.3
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 5.1e-39 164.9 158 56.3
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 6.6e-39 164.5 158 57.0
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 8.6e-39 164.1 158 54.4
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 3.3e-38 162.2 158 55.1
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 5.6e-38 161.4 158 56.3
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 5.6e-38 161.4 155 54.8
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 5.6e-38 161.4 159 57.2
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 7.3e-38 161.0 158 55.1
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 7.3e-38 161.0 171 55.0
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 9.5e-38 160.6 159 56.0
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 2.8e-37 159.1 158 55.1
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 2.8e-37 159.1 159 50.9
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 4.7e-37 158.3 160 53.8
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 6.2e-37 157.9 160 52.5
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 6.2e-37 157.9 160 52.5
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 6.2e-37 157.9 158 56.3
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 1.4e-36 156.8 143 64.3
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 2.3e-36 156.0 170 50.6
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 2.3e-36 156.0 168 53.0
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 3.1e-36 155.6 197 46.7
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 5.2e-36 154.8 158 49.4
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 5.2e-36 154.8 162 53.7
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 6.8e-36 154.5 159 54.7
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 1.2e-35 153.7 158 50.0
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 2.0e-35 152.9 158 49.4
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 2.6e-35 152.5 158 50.6
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 2.6e-35 152.5 160 56.2
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 3.4e-35 152.1 153 55.6
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 4.4e-35 151.8 163 51.5
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 5.8e-35 151.4 159 52.8
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 5.8e-35 151.4 159 52.8
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 5.8e-35 151.4 157 50.3
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 1.3e-34 150.2 165 55.2
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 2.2e-34 149.4 160 46.9
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 2.2e-34 149.4 158 50.6
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 2.2e-34 149.4 157 54.1
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 4.9e-34 148.3 153 56.2
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 4.9e-34 148.3 158 51.3
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 6.4e-34 147.9 163 50.3
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 1.1e-33 147.1 164 50.6
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 2.4e-33 146.0 159 49.1
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 3.2e-33 145.6 161 52.2
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 4.1e-33 145.2 162 48.1
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 5.4e-33 144.8 159 49.1
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 5.4e-33 144.8 163 49.1
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 7.1e-33 144.4 154 54.5
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 7.1e-33 144.4 158 51.3
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 9.2e-33 144.1 160 50.6
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 9.2e-33 144.1 158 48.1
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 9.2e-33 144.1 158 47.5
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 1.6e-32 143.3 157 52.9
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 2.7e-32 142.5 154 48.7
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 2.7e-32 142.5 166 47.0
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 2.7e-32 142.5 168 53.0
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 4.6e-32 141.7 155 49.0
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 6.0e-32 141.4 154 48.7
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 6.0e-32 141.4 158 50.0
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 6.0e-32 141.4 159 47.8
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 7.8e-32 141.0 158 48.1
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 1.3e-31 140.2 155 49.0
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 3.0e-31 139.0 223 43.5
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 3.9e-31 138.7 155 48.4
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 3.9e-31 138.7 170 45.9
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 6.6e-31 137.9 161 50.3
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 8.6e-31 137.5 155 48.4
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 1.9e-30 136.3 163 47.9
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 3.3e-30 135.6 152 46.7
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 4.3e-30 135.2 155 47.7
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 1.2e-29 133.7 160 50.0
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 2.8e-29 132.5 159 46.5
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 4.7e-29 131.7 164 47.0
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 4.7e-29 131.7 149 49.7
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 8.1e-29 131.0 200 41.5
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 1.1e-28 130.6 154 45.5
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 1.4e-28 130.2 158 45.6
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 2.4e-28 129.4 192 41.1
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 3.1e-28 129.0 244 38.9
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 4.0e-28 128.6 162 45.1
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 1.2e-27 127.1 149 52.3
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 2.0e-27 126.3 161 49.7
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 2.0e-27 126.3 193 40.4
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 3.4e-27 125.6 164 45.1
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 4.4e-27 125.2 267 34.1
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 5.8e-27 124.8 161 50.9
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 5.8e-27 124.8 160 44.4
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 9.9e-27 124.0 153 47.7
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 1.7e-26 123.2 165 43.0
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 2.2e-26 122.9 152 45.4
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 3.8e-26 122.1 152 45.4
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 3.8e-26 122.1 158 46.2
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 4.9e-26 121.7 146 48.6
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 6.4e-26 121.3 155 48.4
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 6.4e-26 121.3 158 43.7
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 8.4e-26 120.9 162 42.6
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 1.1e-25 120.6 142 48.6
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 1.4e-25 120.2 152 44.7
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 1.4e-25 120.2 111 55.9
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 1.4e-25 120.2 157 40.8
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 1.4e-25 120.2 157 40.8
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 1.9e-25 119.8 114 57.9
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 2.4e-25 119.4 154 42.9
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 2.4e-25 119.4 145 49.0
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 2.4e-25 119.4 151 46.4
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 4.2e-25 118.6 155 49.0
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 7.1e-25 117.9 157 43.9
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 2.1e-24 116.3 151 43.7
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 2.7e-24 115.9 148 47.3
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 2.7e-24 115.9 140 46.4
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 7.8e-24 114.4 148 46.6
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 7.8e-24 114.4 148 46.6
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 1.3e-23 113.6 151 43.7
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 1.3e-23 113.6 151 43.7
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 3.0e-23 112.5 170 44.7
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 1.5e-22 110.2 105 53.3
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 1.5e-22 110.2 157 43.3
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 2.5e-22 109.4 155 47.1
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 7.3e-22 107.8 163 46.0
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 6.2e-21 104.8 219 37.4
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 1.8e-20 103.2 138 46.4
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 4.0e-20 102.1 175 34.9
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 2.6e-19 99.4 81 63.0
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 6.4e-18 94.7 159 37.7
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 8.4e-18 94.4 163 37.4
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 7.1e-17 91.3 155 40.6
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 7.1e-17 91.3 79 60.8
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 1.7e-15 86.7 88 52.3
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 2.3e-15 86.3 81 54.3
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 9.6e-14 80.9 80 50.0
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 1.3e-13 80.5 73 54.8
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 2.8e-13 79.3 87 55.2
Cfa012421 Carpinus fangiana HOM05D004587 ORTHO05D005512 1.8e-12 76.6 88 51.1
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 5.3e-12 75.1 72 55.6
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 2.6e-11 72.8 109 39.4
Actinidia03381 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.3e-10 70.5 76 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 2.9e-10 69.3 109 36.7
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 4.9e-10 68.6 82 45.1
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 8.4e-10 67.8 77 44.2
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 4.2e-09 65.5 90 38.9
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 7.1e-09 64.7 140 33.6
Sabra19G0094000 Salix brachista HOM05D004587 ORTHO05D005512 7.4e-06 54.7 34 70.6


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