Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G4442 Fragaria x ananassa HOM05D000003 ORTHO05D020649 3.3e-71 271.6 134 100.0
FvH4_3g30492 Fragaria vesca HOM05D000003 ORTHO05D000022 5.0e-27 124.8 139 49.6
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 2.0e-23 112.8 121 47.9
RcHm_v2.0_Chr5g0053531 Rosa chinensis HOM05D000003 ORTHO05D000004 7.1e-21 104.4 175 35.4
FvH4_2g06731 Fragaria vesca HOM05D000003 ORTHO05D020649 1.5e-18 96.7 60 68.3
FvH4_6g27023 Fragaria vesca HOM05D000003 ORTHO05D020649 3.3e-18 95.5 60 70.0
FAN16G2819 Fragaria x ananassa HOM05D000003 ORTHO05D000022 3.3e-18 95.5 168 36.3
FAN17G0469 Fragaria x ananassa HOM05D000003 ORTHO05D020649 7.3e-18 94.4 156 37.2
FAN05G1276 Fragaria x ananassa HOM05D000003 ORTHO05D020649 1.1e-16 90.5 58 67.2
FAN05G5257 Fragaria x ananassa HOM05D000003 ORTHO05D020649 4.0e-16 88.6 59 64.4
FvH4_2g12061 Fragaria vesca HOM05D000003 ORTHO05D000022 1.3e-14 83.6 65 56.9
FvH4_1g29782 Fragaria vesca HOM05D000003 ORTHO05D000022 9.2e-13 77.4 119 40.3
FvH4_6g25500 Fragaria vesca HOM05D000003 ORTHO05D000007 2.1e-12 76.3 74 50.0
RcHm_v2.0_Chr2g0146161 Rosa chinensis HOM05D000003 ORTHO05D000022 1.3e-11 73.6 174 32.2
RcHm_v2.0_Chr6g0262791 Rosa chinensis HOM05D000003 ORTHO05D000022 1.7e-11 73.2 176 31.2
RcHm_v2.0_Chr3g0486471 Rosa chinensis HOM05D000003 ORTHO05D000022 3.9e-11 72.0 60 55.0
RcHm_v2.0_Chr1g0351011 Rosa chinensis HOM05D000003 ORTHO05D000004 6.6e-11 71.2 175 29.7
RcHm_v2.0_Chr5g0051041 Rosa chinensis HOM05D000003 ORTHO05D020649 6.6e-11 71.2 86 47.7
FvH4_1g24182 Fragaria vesca HOM05D000003 ORTHO05D000004 1.2e-09 67.0 127 36.2
RcHm_v2.0_Chr2g0144631 Rosa chinensis HOM05D000003 ORTHO05D000022 1.6e-09 66.6 171 29.2
RcHm_v2.0_Chr4g0406871 Rosa chinensis HOM05D000003 ORTHO05D000004 1.6e-09 66.6 173 30.6
Prupe.1G291700 Prunus persica HOM05D000061 ORTHO05D000050 3.6e-09 65.5 102 33.3
RcHm_v2.0_Chr1g0321741 Rosa chinensis HOM05D000003 ORTHO05D012910 6.2e-09 64.7 96 41.7
RcHm_v2.0_Chr1g0382551 Rosa chinensis HOM05D000003 ORTHO05D000004 6.2e-09 64.7 49 59.2
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 8.1e-09 64.3 74 43.2
Atru.chr2.971 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-08 63.9 114 33.3
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-08 63.5 144 31.9
Atru.chr2.2101 Acer truncatum HOM05D000003 ORTHO05D000022 6.8e-08 61.2 130 33.1
FvH4_1g25671 Fragaria vesca HOM05D000003 ORTHO05D000022 1.2e-07 60.5 51 52.9
RcHm_v2.0_Chr1g0384551 Rosa chinensis HOM05D000003 ORTHO05D000004 1.5e-07 60.1 41 63.4
Thecc.06G025800 Theobroma cacao HOM05D000003 ORTHO05D000022 2.0e-07 59.7 85 35.3
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-07 58.9 88 34.1
Thecc.06G023800 Theobroma cacao HOM05D000003 ORTHO05D000006 3.4e-07 58.9 119 31.1
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 7.6e-07 57.8 145 30.3
QL12p025692 Quercus lobata HOM05D014996 ORTHO05D000022 1.3e-06 57.0 103 28.2
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-06 56.2 86 32.6
Sabra01G0106600 Salix brachista HOM05D000003 ORTHO05D000022 3.8e-06 55.5 124 29.8
Prupe.4G161900 Prunus persica HOM05D000003 ORTHO05D000022 4.9e-06 55.1 107 32.7
Atru.chr1.3365 Acer truncatum HOM05D000003 ORTHO05D000004 8.4e-06 54.3 175 26.9


User provided reference genes

Program Settings