Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G4231 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-130 467.6 232 100.0
FvH4_5g12191 Fragaria vesca HOM05D002813 ORTHO05D003203 5.9e-92 341.3 291 66.0
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.4e-86 321.2 177 91.0
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-80 302.4 269 61.3
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.6e-75 284.3 279 59.1
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-74 283.9 315 52.7
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-73 278.5 315 51.7
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 8.7e-51 204.5 315 42.9
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 1.6e-44 183.7 319 39.2
FvH4_5g09361 Fragaria vesca HOM05D002813 ORTHO05D003203 3.1e-40 169.5 324 38.6
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.9e-40 168.3 324 38.0
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.8e-39 165.2 318 36.8
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 1.7e-38 163.7 324 37.7
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 2.2e-38 163.3 244 44.3
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 4.6e-36 155.6 324 36.4
FAN25G3196 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.6e-36 155.6 176 50.6
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 1.8e-35 153.7 175 51.4
FAN20G1057 Fragaria x ananassa HOM05D002813 ORTHO05D000003 2.3e-35 153.3 175 51.4
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-35 152.1 175 51.4
FAN04G3253 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-32 143.7 206 44.2
FAN11G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-29 132.5 235 43.0
FAN06G2359 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-27 125.9 309 32.4
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-27 125.6 243 36.6
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 8.7e-27 124.8 243 37.4
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-26 124.0 243 37.0
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-26 124.0 243 37.0
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-26 122.9 243 36.6
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-26 121.3 323 30.3
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 2.2e-25 120.2 196 40.8
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 6.3e-25 118.6 323 29.1
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-24 117.1 323 30.7
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 2.4e-24 116.7 246 34.1
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 6.9e-24 115.2 246 34.1
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-23 112.5 323 29.4
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-23 112.1 322 31.1
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-22 110.9 322 31.1
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-22 109.8 322 30.7
FAN21G0006 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-22 109.0 286 35.3
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.5e-22 108.2 322 30.1
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 1.1e-21 107.8 183 39.3
FvH4_5g12180 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-21 107.5 178 37.1
FvH4_7g18342 Fragaria vesca HOM05D002813 ORTHO05D003203 1.9e-21 107.1 284 30.3
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 1.9e-21 107.1 221 36.2
FvH4_5g12210 Fragaria vesca HOM05D002813 ORTHO05D003203 5.5e-21 105.5 245 30.2
FAN10G2587 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-21 105.1 211 35.5
FAN04G1018 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-20 104.4 75 70.7
FAN06G4596 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-20 102.8 178 38.8
FAN18G0957 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-19 101.3 174 36.8
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 1.0e-19 101.3 324 29.3
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-19 100.5 232 33.6
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-18 95.5 247 30.8
FAN01G0062 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-17 94.4 211 33.6
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-17 93.6 248 29.8
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-17 92.8 247 30.8
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 6.3e-17 92.0 247 30.4
FAN10G3741 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-16 90.5 211 36.0
FAN03G2769 Fragaria x ananassa HOM05D002378 ORTHO05D002936 2.4e-16 90.1 105 50.5
FAN15G1644 Fragaria x ananassa HOM05D002378 ORTHO05D002936 2.4e-16 90.1 105 50.5
FAN21G3192 Fragaria x ananassa HOM05D002378 ORTHO05D002936 2.4e-16 90.1 105 50.5
FAN24G2051 Fragaria x ananassa HOM05D002378 ORTHO05D002936 2.4e-16 90.1 105 50.5
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 4.1e-16 89.4 250 32.0
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 6.9e-16 88.6 303 29.0
FAN18G3812 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.9e-16 88.6 178 39.3
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 6.9e-16 88.6 250 31.6
FAN06G1567 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.1e-16 88.2 222 36.0
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.1e-16 88.2 287 29.6
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 9.1e-16 88.2 250 32.0
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 1.2e-15 87.8 243 30.9
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-15 87.4 299 29.4
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.6e-15 86.7 183 36.1
FAN25G0875 Fragaria x ananassa HOM05D002378 ORTHO05D005974 3.4e-15 86.3 102 50.0
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 4.5e-15 85.9 309 28.8
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-15 85.9 317 28.7
FAN04G1334 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-15 85.9 178 34.8
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 1.0e-14 84.7 250 30.4
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-14 84.3 227 33.0
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-14 84.0 299 28.8
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 1.7e-14 84.0 263 30.8
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 1.7e-14 84.0 318 27.4
FAN08G0206 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-14 83.6 175 29.7
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 2.2e-14 83.6 237 27.4
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 2.2e-14 83.6 248 29.0
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 3.8e-14 82.8 183 35.0
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 5.0e-14 82.4 250 32.0
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-14 82.4 299 28.4
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 5.0e-14 82.4 164 35.4
FvH4_5g10370 Fragaria vesca HOM05D002813 ORTHO05D003203 8.5e-14 81.6 229 30.1
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.5e-14 81.6 297 28.6
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 8.5e-14 81.6 249 30.5
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-13 81.3 230 29.6
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-13 81.3 230 29.6
Thecc.09G045300 Theobroma cacao HOM05D002813 ORTHO05D003203 2.5e-13 80.1 183 33.9
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-13 79.7 234 31.6
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 3.2e-13 79.7 181 35.4
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 3.2e-13 79.7 255 28.6
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-13 79.3 316 26.3
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-13 78.6 250 29.6
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 9.4e-13 78.2 324 27.2
FAN18G0728 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-12 77.8 147 32.7
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-12 77.8 324 25.6
FAN28G0350 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-12 77.4 231 29.0
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 2.1e-12 77.0 245 31.0
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-12 77.0 230 29.6
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 2.7e-12 76.6 317 27.4
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 2.7e-12 76.6 314 25.8
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-12 76.6 314 25.8
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 2.7e-12 76.6 327 26.3
Peaxi162Scf00227g00722 Petunia axillaris HOM05D002813 ORTHO05D003203 2.7e-12 76.6 265 29.1
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 3.6e-12 76.3 334 25.4
FAN18G0945 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-12 76.3 219 30.6
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 3.6e-12 76.3 317 27.1
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 4.7e-12 75.9 298 26.2
FAN24G1750 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-12 75.9 231 30.3
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 4.7e-12 75.9 249 28.9
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 6.1e-12 75.5 243 29.2
FAN15G1653 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.1e-12 75.5 230 29.6
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 7.9e-12 75.1 318 25.8
FvH4_5g12211 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-11 74.3 88 50.0
FAN13G0265 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-11 73.9 192 30.7
FAN25G2065 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-11 73.9 217 30.0
FAN18G0102 Fragaria x ananassa HOM05D002813 ORTHO05D209810 2.3e-11 73.6 35 97.1
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-11 73.2 316 25.6
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 6.7e-11 72.0 254 30.7
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 6.7e-11 72.0 248 27.8
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 8.8e-11 71.6 300 28.3
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-11 71.6 300 28.3
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-10 71.2 313 27.2
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 2.0e-10 70.5 317 26.8
FAN18G2398 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.4e-10 69.3 40 82.5
FvH4_2g32600 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-09 67.8 259 28.2
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 2.8e-09 66.6 275 26.9
FAN02G0699 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-09 66.2 174 31.0
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-09 66.2 317 26.8
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 4.8e-09 65.9 318 26.7
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 6.3e-09 65.5 304 27.0
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.3e-09 65.5 102 42.2
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.3e-09 65.5 216 27.8
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 8.2e-09 65.1 102 43.1
FAN14G0433 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.2e-09 65.1 102 43.1
FvH4_3g11280 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-08 64.7 214 27.6
FAN02G3770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-08 64.7 102 42.2
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-08 64.7 102 43.1
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 2.4e-08 63.5 183 30.6
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-08 62.8 114 36.8
FvH4_5g19260 Fragaria vesca HOM05D002813 ORTHO05D003203 5.3e-08 62.4 119 34.5
FAN17G1816 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.0e-08 62.0 105 38.1
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 7.0e-08 62.0 248 28.2
FvH4_5g12190 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-07 61.2 257 25.7
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 1.2e-07 61.2 232 27.2
FAN27G3291 Fragaria x ananassa HOM05D007761 ORTHO05D003203 1.5e-07 60.8 109 34.9
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-07 60.1 75 44.0
SalBow7G4561 Salvia bowleyana HOM05D001905 ORTHO05D001820 3.4e-07 59.7 212 24.5
FAN02G4625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-07 58.9 43 58.1
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-07 58.9 43 58.1
FAN09G4302 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-07 58.9 43 58.1
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-07 58.9 300 24.3
RcHm_v2.0_Chr5g0073461 Rosa chinensis HOM05D002813 ORTHO05D003203 7.7e-07 58.5 39 74.4
FAN05G5767 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-06 58.2 42 64.3
VMungo0647G1437 Vigna mungo HOM05D001905 ORTHO05D001820 1.0e-06 58.2 212 23.1
Ca_13256_v3 Cicer arietinum L. HOM05D001905 ORTHO05D001820 1.7e-06 57.4 212 21.7
FAN13G1093 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-06 57.4 66 48.5
FAN28G0547 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-06 57.4 40 62.5
CiPaw.16G053300 Carya illinoinensis HOM05D002813 ORTHO05D003203 3.8e-06 56.2 98 40.8
Lalb_Chr14g0368481 Lupinus albus HOM05D001905 ORTHO05D001820 3.8e-06 56.2 201 23.9
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 5.0e-06 55.8 43 55.8
FAN03G2494 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-06 55.8 106 36.8
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-06 55.8 43 55.8
RcHm_v2.0_Chr6g0306231 Rosa chinensis HOM05D002813 ORTHO05D003203 5.0e-06 55.8 118 33.9
Solyc08g066630.2 Solanum lycopersicum HOM05D002813 ORTHO05D003203 5.0e-06 55.8 112 35.7
CSS0024135 Camellia sinensis var. sinensis HOM05D001905 ORTHO05D001820 6.5e-06 55.5 214 23.4
COL.COLO4_10116 Corchorus olitorius HOM05D001905 ORTHO05D001820 6.5e-06 55.5 218 22.5
SHI08332 Sapria himalayana HOM05D001905 ORTHO05D001820 8.5e-06 55.1 171 29.2


User provided reference genes

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