Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G4195 Fragaria x ananassa HOM05D000045 ORTHO05D000067 1.2e-76 289.7 141 100.0
FvH4_3g31442 Fragaria vesca HOM05D000045 ORTHO05D000067 7.2e-24 114.4 172 41.3
CSS0016639 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.7e-17 93.2 143 37.8
CSS0035306 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.7e-15 85.1 134 37.3
Actinidia02450 Actinidia chinensis HOM05D000045 ORTHO05D000067 1.8e-14 83.2 172 32.0
CSS0008641 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.8e-14 83.2 133 37.6
CSS0024773 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.0e-14 82.4 133 36.1
Atru.chr5.2454 Acer truncatum HOM05D003511 ORTHO05D004403 5.2e-14 81.6 174 32.8
CSS0046475 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.7e-14 81.3 133 36.8
CSS0024514 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.8e-14 80.9 133 35.3
CSS0041777 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.0e-13 79.7 133 34.6
CSS0041074 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.6e-13 79.3 162 32.1
CSS0007642 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.4e-13 78.6 172 32.0
CSS0040930 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.7e-13 77.4 133 35.3
EL10Ac1g01868 Beta vulgaris HOM05D000045 ORTHO05D000067 1.3e-12 77.0 172 32.6
CSS0017425 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.3e-12 77.0 172 30.8
CSS0002394 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.7e-12 76.6 174 31.6
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.7e-12 76.6 174 31.6
CSS0018197 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.8e-12 75.1 174 30.5
Os02g0542200 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 4.8e-12 75.1 167 29.3
CSS0017444 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.2e-12 74.3 172 31.4
Rhsim05G0213300 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.2e-12 74.3 174 31.6
Rhsim12G0018100 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-11 73.9 172 29.7
CSS0020853 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-11 73.6 138 36.2
Rhsim02G0126700 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.6e-10 70.1 171 30.4
CSS0021123 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.0e-10 69.7 175 28.6
TPR.G35603 Trifolium pratense HOM05D000045 ORTHO05D000067 2.0e-10 69.7 170 30.0
Rhsim01G0226000 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.6e-10 69.3 172 31.4
CiPaw.09G035500 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.5e-10 68.6 177 24.9
RhsimUnG0130200 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.0e-09 67.4 172 30.2
TPR.G16952 Trifolium pratense HOM05D000045 ORTHO05D000067 1.7e-09 66.6 166 30.7
CSS0042373 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.2e-09 66.2 163 29.4
Rhsim12G0053100 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.8e-09 65.5 141 32.6
TPR.G39279 Trifolium pratense HOM05D000045 ORTHO05D000067 1.1e-08 63.9 170 27.6
TWI73G1051 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-08 63.9 161 28.0
TWI34G1161 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.5e-08 63.5 179 26.8
CSS0000341 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-08 63.2 176 27.3
CSS0004211 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-08 63.2 176 27.3
TPR.G28057 Trifolium pratense HOM05D000045 ORTHO05D000067 1.9e-08 63.2 171 29.8
CSS0003195 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-08 62.8 175 24.6
CSS0025579 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-08 62.8 175 24.6
CSS0041653 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-08 62.8 175 24.6
HPP92_000949 Vanilla planifolia HOM05D000045 ORTHO05D000067 4.2e-08 62.0 145 29.0
CSS0005964 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.5e-08 61.6 176 26.7
CSS0011546 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.5e-08 61.6 139 28.8
CSS0047126 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.5e-08 61.6 169 27.2
TPR.G18125 Trifolium pratense HOM05D000045 ORTHO05D000067 7.2e-08 61.2 176 28.4
CSS0014838 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.4e-08 60.8 176 26.7
CSS0047463 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D009008 9.4e-08 60.8 175 29.1
Rhsim02G0127400 Rhododendron simsii HOM05D000045 ORTHO05D003357 9.4e-08 60.8 134 27.6
Rhsim10G0174800 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.4e-08 60.8 172 29.1
TPR.G40442 Trifolium pratense HOM05D000045 ORTHO05D000067 9.4e-08 60.8 171 29.8
TPR.G23616 Trifolium pratense HOM05D000045 ORTHO05D000067 1.2e-07 60.5 173 30.1
EL10Ac7g16467 Beta vulgaris HOM05D000045 ORTHO05D000067 1.6e-07 60.1 58 51.7
Os10g0571900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.6e-07 60.1 172 29.7
CSS0023299 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-07 59.3 170 25.3
Ciclev10003358m.g Citrus clementina HOM05D000045 ORTHO05D000067 2.7e-07 59.3 58 44.8
EL10Ac2g03509 Beta vulgaris HOM05D000045 ORTHO05D000067 3.6e-07 58.9 58 51.7
CANSAT64G1822 Cannabis sativa HOM05D000045 ORTHO05D000067 3.6e-07 58.9 170 28.2
Carub.0002s2322 Capsella rubella HOM05D000045 ORTHO05D000067 3.6e-07 58.9 159 32.7
Sp5g31460 Schrenkiella parvula HOM05D000045 ORTHO05D000067 6.1e-07 58.2 158 29.7
TPR.G9806 Trifolium pratense HOM05D000045 ORTHO05D000067 6.1e-07 58.2 174 29.3
TWI34G0182 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.1e-07 58.2 180 28.3
Duzib147G0739 Durio zibethinus HOM05D000045 ORTHO05D000067 8.0e-07 57.8 173 28.9
Thhalv10018262m.g Eutrema salsugineum HOM05D000045 ORTHO05D000067 8.0e-07 57.8 158 31.0
TPR.G1463 Trifolium pratense HOM05D000045 ORTHO05D000067 8.0e-07 57.8 183 26.8
COL.COLO4_25082 Corchorus olitorius HOM05D000045 ORTHO05D004773 1.0e-06 57.4 70 38.6
AL3G45180 Arabidopsis lyrata HOM05D000045 ORTHO05D000067 1.4e-06 57.0 141 33.3
Rhsim08G0046500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.4e-06 57.0 168 28.6
Thecc.04G026200 Theobroma cacao HOM05D000045 ORTHO05D000067 1.4e-06 57.0 172 31.4
AT1G76320 Arabidopsis thaliana HOM05D000045 ORTHO05D000067 2.3e-06 56.2 158 32.3
EL10Ac7g17614 Beta vulgaris HOM05D000045 ORTHO05D000611 2.3e-06 56.2 58 50.0
Thhalv10017871m.g Eutrema salsugineum HOM05D000045 ORTHO05D000067 2.3e-06 56.2 143 30.1
Aa31LG4G6410 Aethionema arabicum HOM05D000045 ORTHO05D000067 3.0e-06 55.8 157 29.3
AL2G36420 Arabidopsis lyrata HOM05D000045 ORTHO05D000067 3.0e-06 55.8 158 31.6
Ciclev10014295m.g Citrus clementina HOM05D000045 ORTHO05D000067 3.0e-06 55.8 162 29.0
Thhalv10021958m.g Eutrema salsugineum HOM05D000045 ORTHO05D000067 3.0e-06 55.8 166 25.9
Lj9C188T0 Lonicera japonica HOM05D000045 ORTHO05D000067 3.0e-06 55.8 130 27.7
Lalb_Chr09g0328211 Lupinus albus HOM05D000045 ORTHO05D000067 3.0e-06 55.8 156 29.5
PSO170G0991 Papaver somniferum HOM05D000045 ORTHO05D000067 3.0e-06 55.8 169 27.8
HPP92_009461 Vanilla planifolia HOM05D000045 ORTHO05D000067 3.0e-06 55.8 168 28.0
CiPaw.14G121500 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.0e-06 55.5 158 29.7
COL.COLO4_12964 Corchorus olitorius HOM05D000045 ORTHO05D000067 4.0e-06 55.5 72 43.1
Atru.chr3.2441 Acer truncatum HOM05D000045 ORTHO05D000067 5.2e-06 55.1 170 31.2
Aqoxy7G01996 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 5.2e-06 55.1 170 27.1
CAN.G182.23 Capsicum annuum HOM05D000045 ORTHO05D000067 5.2e-06 55.1 142 31.0
FvH4_4g12203 Fragaria vesca HOM05D000045 ORTHO05D000067 8.8e-06 54.3 30 76.7


User provided reference genes

Program Settings