Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.2e-263 911.8 454 100.0
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.3e-220 768.8 458 86.9
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 4.4e-208 728.0 454 84.8
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.8e-201 706.1 459 81.7
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.3e-195 684.9 454 79.5
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.9e-180 635.2 464 73.7
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 7.3e-179 630.9 461 74.0
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 2.0e-160 569.7 419 72.1
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 1.9e-158 563.1 462 66.7
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 9.3e-158 560.8 454 68.5
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 2.3e-156 556.2 416 70.0
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 2.5e-155 552.7 423 68.8
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 7.4e-155 551.2 423 68.6
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 3.7e-154 548.9 430 68.4
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 4.8e-154 548.5 446 66.1
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.7e-151 540.0 443 65.0
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.7e-151 540.0 405 71.1
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 2.5e-150 536.2 447 64.9
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 2.1e-149 533.1 421 64.8
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 2.7e-149 532.7 434 65.4
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 3.6e-149 532.3 412 67.0
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 6.1e-149 531.6 413 65.9
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.8e-148 530.0 434 65.2
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.3e-148 529.6 433 64.9
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 3.0e-148 529.3 453 63.4
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 3.9e-148 528.9 431 63.8
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 3.9e-148 528.9 438 65.8
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 5.1e-148 528.5 456 64.0
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 5.1e-148 528.5 438 64.6
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 6.3e-146 521.5 425 65.6
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.8e-145 520.0 455 62.2
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 9.1e-145 517.7 424 63.0
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.2e-144 517.3 405 68.4
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.5e-144 516.9 452 60.6
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.6e-144 516.2 427 64.4
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 5.9e-144 515.0 450 60.4
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 7.7e-144 514.6 421 65.1
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.8e-143 512.3 408 64.0
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 5.0e-143 511.9 420 64.8
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 5.0e-143 511.9 416 65.4
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 5.0e-143 511.9 408 64.0
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 1.4e-142 510.4 408 66.9
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.4e-142 510.4 415 62.7
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 4.7e-141 505.4 446 61.4
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 1.4e-140 503.8 409 63.6
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.8e-140 503.4 408 64.7
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 3.0e-140 502.7 408 62.7
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.1e-140 501.9 406 63.5
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 1.5e-139 500.4 408 62.7
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 2.0e-139 500.0 430 61.2
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 2.0e-139 500.0 418 61.5
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 5.7e-139 498.4 403 62.8
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 2.8e-138 496.1 437 60.4
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 3.7e-138 495.7 423 62.2
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 3.7e-138 495.7 422 60.9
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.1e-137 494.2 444 59.5
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 2.4e-137 493.0 403 62.3
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 3.1e-137 492.7 403 62.0
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.2e-136 490.7 414 62.8
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 3.4e-136 489.2 414 61.1
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 4.5e-136 488.8 455 59.8
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 1.7e-135 486.9 379 64.4
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 2.9e-135 486.1 418 60.5
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 1.4e-134 483.8 433 61.7
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.4e-134 483.8 482 56.4
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 1.4e-134 483.8 426 60.8
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 3.2e-134 482.6 415 60.7
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.6e-133 480.3 418 62.0
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 2.7e-133 479.6 295 78.6
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 3.6e-133 479.2 389 65.8
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 3.0e-132 476.1 405 60.2
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 3.9e-132 475.7 386 62.4
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 8.8e-132 474.6 425 59.8
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 3.3e-131 472.6 410 60.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 2.8e-130 469.5 457 56.0
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.8e-129 466.8 415 61.0
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 4.1e-129 465.7 427 60.2
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 1.5e-126 457.2 402 58.5
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 6.1e-125 451.8 384 63.0
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 8.0e-125 451.4 394 61.2
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 9.1e-121 438.0 393 58.5
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.2e-112 411.0 417 56.8
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.6e-112 410.6 335 65.7
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 3.8e-111 406.0 445 53.3
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.9e-110 403.7 421 52.3
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.0e-103 381.3 387 53.0
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.1e-102 377.9 411 49.1
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 7.0e-97 358.6 375 51.2
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 3.5e-96 356.3 462 47.4
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 3.6e-93 346.3 397 47.1
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-86 323.2 291 55.0
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 9.5e-86 321.6 273 61.2
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.1e-84 318.2 273 60.4
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.3e-79 301.2 311 53.7
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.4e-65 253.8 369 42.5
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.4e-60 238.0 178 70.8
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.3e-53 214.9 410 36.6
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.4e-49 201.4 139 71.2
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.7e-48 197.2 130 72.3
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 3.9e-39 166.8 133 63.9
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.1e-38 165.2 176 51.7
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 8.2e-37 159.1 108 69.4
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 6.9e-28 129.4 112 58.0
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.6e-27 127.5 78 74.4
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 5.5e-25 119.8 125 51.2
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 2.0e-22 111.3 122 52.5
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.2e-19 102.1 78 66.7
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 6.5e-18 96.3 99 53.5
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.2e-16 92.0 206 31.6
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 3.6e-16 90.5 179 32.4
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 8.8e-15 85.9 224 31.7
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.3e-14 84.0 41 90.2
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 7.4e-14 82.8 114 48.2
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.8e-12 78.2 52 71.2
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 2.0e-11 74.7 82 52.4
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.7e-10 71.6 408 23.8


User provided reference genes

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