Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 8.7e-186 654.1 487 100.0
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 3.6e-184 648.7 487 99.8
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 1.2e-179 633.6 487 96.9
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.5e-179 632.1 497 96.8
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 5.8e-174 614.8 488 96.1
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 1.0e-141 507.7 510 82.9
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 1.5e-105 387.5 499 69.7
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 9.8e-105 384.8 496 58.3
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 4.9e-104 382.5 504 65.5
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 7.0e-103 378.6 516 68.0
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 1.6e-102 377.5 495 68.7
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 2.6e-97 360.1 492 45.9
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 1.9e-95 354.0 492 45.7
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 2.4e-95 353.6 491 44.8
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 9.2e-95 351.7 487 46.4
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 9.2e-95 351.7 499 61.9
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 4.6e-94 349.4 488 44.7
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 1.3e-93 347.8 491 48.7
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 1.3e-93 347.8 489 44.0
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 1.7e-93 347.4 488 62.3
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 3.0e-93 346.7 484 45.5
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 5.1e-93 345.9 491 69.2
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 8.6e-93 345.1 497 63.6
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 1.1e-92 344.7 488 68.4
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 1.9e-92 344.0 491 49.9
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 4.7e-91 339.3 491 43.6
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 6.2e-91 339.0 488 44.5
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 1.1e-90 338.2 495 44.0
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 1.4e-90 337.8 487 43.9
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 5.2e-90 335.9 462 45.9
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.5e-89 334.3 488 42.6
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 9.9e-89 331.6 462 43.9
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 3.8e-88 329.7 467 64.2
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 6.4e-88 328.9 487 62.0
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 8.4e-88 328.6 497 55.3
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 2.4e-87 327.0 486 43.0
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 2.4e-87 327.0 490 43.7
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 3.2e-87 326.6 487 65.1
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.2e-86 324.7 487 64.9
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 2.1e-86 323.9 525 65.0
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 3.5e-86 323.2 492 42.9
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 6.0e-86 322.4 475 43.2
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 7.8e-86 322.0 504 65.1
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 5.1e-85 319.3 494 43.9
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 8.6e-85 318.5 490 46.1
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 1.9e-84 317.4 491 55.8
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 2.5e-84 317.0 487 62.2
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 3.3e-84 316.6 490 41.8
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 7.3e-84 315.5 531 40.3
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 7.3e-84 315.5 462 62.8
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 1.2e-83 314.7 483 48.0
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 4.7e-83 312.8 508 63.2
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 4.7e-83 312.8 496 53.2
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 1.4e-82 311.2 491 41.3
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 1.4e-82 311.2 488 40.4
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 2.4e-82 310.5 474 43.0
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 6.9e-82 308.9 489 40.9
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 9.0e-82 308.5 493 59.2
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 9.0e-82 308.5 487 59.3
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 9.0e-82 308.5 489 68.3
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 5.8e-81 305.8 491 64.6
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 1.7e-80 304.3 486 43.8
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 1.7e-80 304.3 456 51.3
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 3.8e-80 303.1 462 46.1
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 2.4e-79 300.4 460 41.1
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 5.4e-79 299.3 476 41.2
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 2.7e-78 297.0 492 44.3
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 3.5e-78 296.6 458 54.6
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 3.3e-76 290.0 496 39.9
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 3.3e-76 290.0 491 50.1
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 6.2e-75 285.8 467 39.6
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 3.1e-74 283.5 447 41.6
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 9.0e-74 282.0 491 39.3
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 2.6e-73 280.4 496 39.1
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 2.6e-73 280.4 495 52.1
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 1.3e-72 278.1 441 45.8
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 3.8e-72 276.6 488 44.7
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 3.8e-72 276.6 488 44.7
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 4.2e-71 273.1 486 46.7
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 5.4e-71 272.7 500 45.0
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 5.4e-71 272.7 486 47.7
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 5.4e-71 272.7 424 40.3
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 9.3e-71 271.9 485 57.3
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 1.2e-70 271.6 508 49.4
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 2.7e-70 270.4 485 49.5
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 6.7e-69 265.8 489 36.4
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 1.9e-68 264.2 487 53.2
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 1.9e-68 264.2 492 45.1
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 7.4e-68 262.3 417 41.2
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 1.6e-67 261.2 505 45.7
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 1.6e-67 261.2 494 56.1
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 1.6e-67 261.2 425 39.3
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 2.1e-67 260.8 506 43.7
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 1.8e-66 257.7 488 46.9
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 3.1e-66 256.9 534 51.3
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 5.3e-66 256.1 485 54.6
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 7.6e-65 252.3 485 46.2
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 9.9e-65 251.9 522 42.0
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 4.9e-64 249.6 486 50.8
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 4.9e-64 249.6 490 34.5
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 4.6e-62 243.0 494 40.9
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 1.0e-61 241.9 510 47.3
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 3.9e-61 240.0 578 50.5
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 1.5e-60 238.0 466 35.2
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 1.9e-60 237.7 492 39.0
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 1.9e-60 237.7 570 51.2
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 3.3e-60 236.9 526 51.1
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 3.3e-60 236.9 526 51.1
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.8e-59 233.8 173 72.3
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 8.2e-59 232.3 170 71.2
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 1.2e-57 228.4 451 34.8
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 2.6e-57 227.3 513 46.8
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 4.5e-57 226.5 469 35.8
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 4.9e-56 223.0 485 34.4
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 2.1e-54 217.6 420 43.8
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 9.7e-52 208.8 142 76.1
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 3.4e-49 200.3 148 68.2
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 1.3e-45 188.3 422 40.5
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 1.3e-45 188.3 442 41.2
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 5.7e-44 183.0 129 72.1
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 9.7e-44 182.2 500 31.8
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 2.5e-39 167.5 191 51.8
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 3.2e-39 167.2 191 53.4
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 1.2e-33 148.7 113 68.1
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 5.0e-32 143.3 450 31.6
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 6.1e-30 136.3 494 34.8
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 4.5e-25 120.2 161 47.8
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 1.2e-22 112.1 74 70.3
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 4.0e-21 107.1 74 66.2
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 5.2e-21 106.7 394 29.2
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 3.2e-15 87.4 95 49.5
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 2.3e-13 81.3 71 47.9
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 3.0e-13 80.9 85 49.4
PRCOL_00001099 Prasinoderma coloniale HOM05D005805 ORTHO05D007226 1.6e-06 58.5 136 29.4


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