Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.5e-52 209.5 130 100.0
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 4.1e-50 201.4 130 89.2
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.7e-48 196.1 128 85.9
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.5e-47 193.0 127 85.8
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 6.0e-41 171.0 134 84.3
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 3.9e-32 141.7 136 66.2
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 2.1e-30 136.0 131 61.8
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 4.7e-30 134.8 130 66.2
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 1.1e-29 133.7 130 63.1
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 1.8e-29 132.9 130 64.6
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 3.1e-29 132.1 130 62.3
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 1.2e-28 130.2 130 60.0
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 3.4e-28 128.6 130 63.1
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 4.4e-28 128.3 130 63.1
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 4.4e-28 128.3 130 63.1
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 2.2e-27 125.9 130 56.9
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 3.7e-27 125.2 130 58.5
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 8.3e-27 124.0 130 56.2
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 1.9e-26 122.9 128 58.6
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 7.1e-26 120.9 131 55.0
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 1.2e-25 120.2 130 63.1
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 2.1e-25 119.4 130 56.2
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 2.1e-25 119.4 128 57.8
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 2.1e-25 119.4 131 59.5
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 2.1e-25 119.4 132 59.1
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 2.7e-25 119.0 135 64.4
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 2.7e-25 119.0 130 56.2
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 2.7e-25 119.0 134 59.7
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 3.5e-25 118.6 132 53.0
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 3.5e-25 118.6 132 53.0
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 4.6e-25 118.2 130 56.9
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 6.0e-25 117.9 130 59.2
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 1.3e-24 116.7 137 58.4
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 1.7e-24 116.3 133 60.2
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 1.7e-24 116.3 130 58.5
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 1.7e-24 116.3 131 56.5
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 2.3e-24 115.9 136 58.8
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 3.0e-24 115.5 130 59.2
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 3.9e-24 115.2 130 57.7
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 5.1e-24 114.8 133 57.9
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 5.1e-24 114.8 130 51.5
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 8.6e-24 114.0 138 57.2
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 1.1e-23 113.6 130 56.2
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 1.1e-23 113.6 130 53.8
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 1.1e-23 113.6 129 55.0
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 1.5e-23 113.2 130 58.5
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 1.5e-23 113.2 130 58.5
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 3.3e-23 112.1 131 63.4
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 7.3e-23 110.9 126 58.7
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 1.2e-22 110.2 135 56.3
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 1.2e-22 110.2 131 66.4
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 1.6e-22 109.8 140 57.9
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 2.1e-22 109.4 138 53.6
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 2.8e-22 109.0 131 58.8
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 2.8e-22 109.0 130 59.2
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 2.8e-22 109.0 130 52.3
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 3.6e-22 108.6 137 52.6
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 3.6e-22 108.6 130 55.4
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 3.6e-22 108.6 129 52.7
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 3.6e-22 108.6 130 56.9
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 6.2e-22 107.8 130 51.5
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 6.2e-22 107.8 132 57.6
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 8.1e-22 107.5 131 51.9
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 8.1e-22 107.5 132 53.8
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 8.1e-22 107.5 127 54.3
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 1.4e-21 106.7 132 57.6
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 2.4e-21 105.9 130 59.2
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 2.4e-21 105.9 127 63.8
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 4.0e-21 105.1 131 60.3
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 1.2e-20 103.6 130 57.7
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 1.2e-20 103.6 130 57.7
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 1.5e-20 103.2 131 54.2
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 1.5e-20 103.2 131 54.2
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 1.5e-20 103.2 131 54.2
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 2.0e-20 102.8 133 51.1
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 2.6e-20 102.4 130 54.6
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 2.6e-20 102.4 134 50.7
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 3.4e-20 102.1 130 56.9
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 3.4e-20 102.1 128 47.7
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 4.4e-20 101.7 128 48.4
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 4.4e-20 101.7 133 57.9
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 7.6e-20 100.9 127 50.4
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 9.9e-20 100.5 130 55.4
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 4.9e-19 98.2 130 51.5
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 8.4e-19 97.4 125 58.4
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 2.1e-17 92.8 135 53.3
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 7.8e-17 90.9 121 52.1
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 1.8e-13 79.7 51 76.5
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 3.1e-13 79.0 134 38.8
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 4.0e-13 78.6 56 71.4
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 5.3e-13 78.2 83 57.8
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 9.0e-13 77.4 130 40.0
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 7.6e-12 74.3 43 83.7
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 7.6e-12 74.3 133 45.1
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 5.4e-10 68.2 48 68.8
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 1.0e-08 63.9 55 63.6
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.0e-08 63.9 54 59.3
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 9.6e-07 57.4 136 36.8


User provided reference genes

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