Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.8e-131 472.6 249 100.0
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.2e-106 390.2 225 94.2
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.7e-106 389.0 270 81.5
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 5.0e-105 384.8 210 98.6
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.1e-103 379.4 244 86.1
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 7.8e-90 334.3 223 84.8
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 1.1e-88 330.5 210 85.7
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 1.6e-63 246.9 209 65.6
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 1.6e-63 246.9 208 66.3
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 1.2e-61 240.7 208 64.4
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 3.4e-61 239.2 206 61.2
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 1.8e-57 226.9 208 60.1
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 6.7e-57 224.9 201 61.7
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 2.5e-56 223.0 205 62.4
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 3.3e-56 222.6 205 61.0
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 4.3e-56 222.2 221 55.2
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 5.6e-56 221.9 208 56.7
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 9.6e-56 221.1 206 61.2
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 2.1e-55 219.9 208 57.2
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 4.8e-55 218.8 208 57.2
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 3.2e-51 206.1 205 54.6
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 3.5e-50 202.6 201 56.2
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 6.0e-50 201.8 241 51.0
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 1.3e-49 200.7 200 57.0
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 1.3e-49 200.7 208 53.4
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 1.8e-49 200.3 208 54.3
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 4.8e-47 192.2 201 52.7
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 3.1e-46 189.5 173 60.1
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 9.0e-46 188.0 208 51.4
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 2.6e-45 186.4 173 60.1
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 2.9e-44 183.0 205 52.2
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 3.8e-44 182.6 178 57.9
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 4.9e-44 182.2 173 59.0
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 4.9e-44 182.2 173 59.0
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 6.5e-44 181.8 202 53.0
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 4.2e-43 179.1 197 53.8
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 7.1e-43 178.3 205 50.7
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 1.2e-42 177.6 177 57.1
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 3.5e-42 176.0 202 50.0
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 1.0e-41 174.5 205 49.8
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 3.9e-41 172.6 205 49.3
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 1.5e-40 170.6 202 50.5
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 4.3e-40 169.1 173 56.6
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 7.4e-40 168.3 170 55.3
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 9.7e-40 167.9 208 48.1
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 1.3e-39 167.5 210 48.1
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 1.6e-39 167.2 198 52.0
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 4.8e-39 165.6 170 54.7
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 1.8e-38 163.7 170 54.7
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 2.4e-38 163.3 179 53.1
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 1.2e-37 161.0 179 50.3
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 1.5e-37 160.6 171 52.6
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 2.0e-37 160.2 204 49.0
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 3.4e-37 159.5 173 50.9
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 1.1e-35 154.5 205 47.3
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 1.9e-35 153.7 237 43.5
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 1.9e-35 153.7 173 51.4
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 7.9e-34 148.3 206 47.1
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.5e-32 143.3 170 48.2
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 1.3e-31 141.0 182 48.4
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 3.7e-31 139.4 181 46.4
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 4.1e-30 136.0 170 47.1
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 2.2e-28 130.2 170 45.9
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 2.2e-28 130.2 170 45.9
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 2.2e-28 130.2 170 45.9
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 3.8e-28 129.4 170 44.7
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 3.8e-28 129.4 170 45.9
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 3.8e-28 129.4 170 45.9
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 2.5e-27 126.7 111 64.9
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 4.2e-27 125.9 170 44.1
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 2.7e-26 123.2 170 44.1
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 8.8e-25 118.2 106 60.4
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 8.8e-25 118.2 204 41.2
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 1.1e-24 117.9 106 58.5
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.8e-22 110.5 77 72.7
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.8e-22 110.5 77 72.7
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 7.0e-22 108.6 131 48.1
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 3.4e-21 106.3 287 31.7
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 1.3e-20 104.4 202 40.6
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 4.2e-19 99.4 74 71.6
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 1.2e-18 97.8 105 51.4
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.1e-18 97.1 94 52.1
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.1e-18 97.1 94 52.1
Lsat_1_v5_gn_9_67701 Lactuca sativa HOM05D007696 ORTHO05D009719 8.8e-17 91.7 58 79.3
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 5.3e-14 82.4 104 48.1
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 2.6e-13 80.1 101 45.5
VMungo0251G1113 Vigna mungo HOM05D007696 ORTHO05D009719 5.9e-13 79.0 93 47.3
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 2.3e-09 67.0 138 35.5


User provided reference genes

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