Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.4e-218 761.9 391 100.0
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 6.7e-213 743.8 396 97.5
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 8.2e-211 736.9 391 97.2
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 3.8e-208 728.0 391 97.2
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 8.3e-179 630.6 390 85.6
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 5.2e-141 505.0 391 74.9
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 1.9e-135 486.5 393 67.4
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 9.9e-132 474.2 399 66.7
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 9.6e-127 457.6 394 65.2
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 6.2e-110 401.7 360 59.4
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 2.4e-109 399.8 393 58.0
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.2e-108 397.5 391 58.8
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 2.0e-108 396.7 357 60.8
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 6.5e-107 391.7 404 55.2
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 1.1e-106 391.0 392 56.9
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 9.6e-103 377.9 392 55.9
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 3.7e-102 375.9 394 56.6
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 2.4e-101 373.2 449 51.2
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 1.5e-100 370.5 364 57.1
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 4.5e-100 369.0 395 54.7
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.3e-99 367.5 358 55.9
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 2.2e-99 366.7 393 55.2
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 3.8e-99 365.9 390 54.4
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 1.1e-98 364.4 395 54.9
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.0e-96 357.8 358 54.7
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 1.8e-96 357.1 406 53.2
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 5.1e-96 355.5 368 54.9
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 9.7e-95 351.3 406 50.5
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 1.3e-94 350.9 354 56.5
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 4.1e-93 345.9 371 53.9
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 4.1e-93 345.9 361 54.6
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 2.6e-92 343.2 440 49.1
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 3.4e-92 342.8 350 54.0
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 5.9e-92 342.0 366 54.6
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 2.2e-91 340.1 396 51.8
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.2e-91 340.1 367 52.0
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 2.9e-91 339.7 395 51.6
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 2.9e-91 339.7 392 51.5
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 9.4e-90 334.7 360 51.4
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 9.4e-90 334.7 385 51.7
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 1.2e-89 334.3 359 51.3
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 2.7e-89 333.2 358 51.4
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 1.0e-88 331.3 367 52.6
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 3.9e-88 329.3 359 52.6
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 3.9e-88 329.3 382 52.1
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 3.9e-88 329.3 355 54.1
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 5.1e-88 328.9 380 52.4
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.1e-87 327.8 396 51.8
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.5e-87 326.6 359 51.0
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 3.3e-87 326.2 373 48.8
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 7.4e-87 325.1 389 50.9
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.1e-85 321.2 393 50.6
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 4.1e-85 319.3 397 48.9
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 9.1e-85 318.2 403 48.4
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 1.5e-84 317.4 396 49.0
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 2.0e-84 317.0 355 51.3
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 2.0e-84 317.0 355 51.3
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 3.4e-84 316.2 399 48.6
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 5.9e-84 315.5 357 51.0
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.3e-83 314.3 430 48.8
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 3.2e-82 309.7 396 48.5
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 9.4e-82 308.1 392 46.9
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 2.1e-81 307.0 353 51.8
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 2.7e-81 306.6 386 48.7
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 2.7e-81 306.6 356 51.4
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 4.7e-81 305.8 394 47.2
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 6.1e-81 305.4 311 55.0
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 3.3e-79 299.7 393 49.1
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 6.3e-78 295.4 393 48.6
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 2.2e-75 287.0 460 43.9
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 2.9e-75 286.6 359 48.2
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 3.8e-75 286.2 400 45.5
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 1.9e-74 283.9 365 47.9
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 1.3e-70 271.2 351 46.4
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 2.8e-70 270.0 355 45.9
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 6.3e-70 268.9 362 44.2
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 1.4e-69 267.7 372 45.7
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 4.1e-69 266.2 314 55.1
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 9.1e-69 265.0 288 52.4
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 2.0e-68 263.8 311 51.4
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 6.5e-67 258.8 389 44.0
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 7.2e-66 255.4 392 42.3
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 9.4e-66 255.0 299 49.5
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 9.4e-66 255.0 387 43.4
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 2.7e-65 253.4 403 40.9
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 6.1e-65 252.3 337 46.3
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 8.8e-64 248.4 356 41.0
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 3.4e-63 246.5 371 42.6
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 7.5e-63 245.4 371 42.9
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 3.7e-62 243.0 390 42.8
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 4.8e-62 242.7 282 51.1
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 3.1e-61 240.0 390 41.8
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 1.2e-60 238.0 390 42.1
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 2.7e-60 236.9 333 45.0
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 4.5e-60 236.1 365 43.6
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 4.5e-60 236.1 365 43.6
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 5.0e-59 232.6 334 42.8
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.9e-58 230.7 313 45.0
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 1.2e-57 228.0 220 58.6
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 4.7e-57 226.1 313 45.0
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 1.8e-56 224.2 363 40.2
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 3.0e-56 223.4 369 42.0
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 6.8e-56 222.2 392 36.5
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 8.8e-56 221.9 278 47.5
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 2.6e-55 220.3 317 47.9
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 4.9e-54 216.1 280 48.2
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 1.1e-50 204.9 334 41.9
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 1.1e-50 204.9 334 41.9
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 1.1e-50 204.9 334 41.9
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 1.5e-50 204.5 423 39.7
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 5.6e-50 202.6 298 43.6
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 5.6e-50 202.6 298 43.6
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 2.3e-48 197.2 398 35.4
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 3.4e-47 193.4 396 35.9
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 4.4e-39 166.4 411 32.4
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 4.6e-28 129.8 315 34.6
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 3.9e-27 126.7 162 50.0
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 1.4e-21 108.2 367 27.2
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 5.1e-19 99.8 76 65.8
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.4e-16 91.7 389 26.5
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 1.3e-14 85.1 230 30.4
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 3.8e-14 83.6 84 54.8
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 1.9e-13 81.3 441 23.6
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 2.4e-13 80.9 71 54.9
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 3.9e-11 73.6 46 71.7
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 3.1e-08 63.9 202 27.7


User provided reference genes

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