Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G3656 Fragaria x ananassa HOM05D004355 ORTHO05D005228 7.4e-44 180.6 128 100.0
FAN06G3154 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.4e-31 139.8 87 89.7
FvH4_6g16100 Fragaria vesca HOM05D004355 ORTHO05D005228 5.5e-31 137.9 92 89.1
FAN06G2627 Fragaria x ananassa HOM05D004355 ORTHO05D005228 7.9e-30 134.0 87 86.2
FAN03G0487 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.1e-28 130.2 92 81.5
FAN05G3868 Fragaria x ananassa HOM05D004355 ORTHO05D005228 8.2e-27 124.0 92 78.3
FAN02G3539 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.1e-26 123.6 84 84.5
FAN05G2251 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.1e-26 123.6 86 82.6
FAN09G2012 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.4e-26 123.2 84 84.5
FAN26G1787 Fragaria x ananassa HOM05D004355 ORTHO05D005228 3.2e-23 112.1 83 79.5
FAN05G5296 Fragaria x ananassa HOM05D004355 ORTHO05D005228 5.2e-21 104.8 79 77.2
MD04G1095900 Malus domestica HOM05D004355 ORTHO05D005228 4.8e-19 98.2 85 67.1
Prupe.6G235000 Prunus persica HOM05D004355 ORTHO05D005228 6.3e-19 97.8 85 68.2
MD12G1115900 Malus domestica HOM05D004355 ORTHO05D005228 8.2e-19 97.4 85 65.9
CANSAT80G0576 Cannabis sativa HOM05D004355 ORTHO05D005228 2.4e-18 95.9 99 59.6
TWI77G0715 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 2.2e-16 89.4 76 65.8
Lalb_Chr01g0018741 Lupinus albus HOM05D004355 ORTHO05D005228 1.1e-15 87.0 90 61.1
Glyma.03G182000 Glycine max HOM05D004355 ORTHO05D005228 1.9e-15 86.3 79 62.0
Psat3g043400 Pisum sativum HOM05D004355 ORTHO05D005228 4.2e-15 85.1 79 60.8
Medtr7g101730 Medicago truncatula HOM05D004355 ORTHO05D005228 5.5e-15 84.7 69 66.7
TWI74G0762 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 7.2e-15 84.3 76 61.8
Atru.chr8.1850 Acer truncatum HOM05D004355 ORTHO05D005228 9.4e-15 84.0 82 61.0
ClCG10G020240 Citrullus lanatus HOM05D004355 ORTHO05D005228 1.6e-14 83.2 80 61.2
MELO3C009345.2 Cucumis melo HOM05D004355 ORTHO05D005228 1.6e-14 83.2 86 58.1
CsaV3_3G035850 Cucumis sativus L. HOM05D004355 ORTHO05D005228 1.6e-14 83.2 86 58.1
TPR.G9373 Trifolium pratense HOM05D004355 ORTHO05D005228 1.6e-14 83.2 70 64.3
VMungo1383G3555 Vigna mungo HOM05D004355 ORTHO05D005228 1.6e-14 83.2 79 59.5
Lalb_Chr25g0289061 Lupinus albus HOM05D004355 ORTHO05D005228 2.1e-14 82.8 73 65.8
Sed0019590 Sechium edule HOM05D004355 ORTHO05D005228 4.7e-14 81.6 77 61.0
Sabra06G0099700 Salix brachista HOM05D004355 ORTHO05D005228 6.1e-14 81.3 74 60.8
Cfa017577 Carpinus fangiana HOM05D004355 ORTHO05D005228 8.0e-14 80.9 95 54.7
Phvul.001G178100 Phaseolus vulgaris HOM05D004355 ORTHO05D005228 1.0e-13 80.5 79 58.2
Haze_20575 Corylus avellana HOM05D004355 ORTHO05D005228 2.3e-13 79.3 95 52.6
Potri.006G126600 Populus trichocarpa HOM05D004355 ORTHO05D005228 2.3e-13 79.3 63 63.5
Glyma.19G182500 Glycine max HOM05D004355 ORTHO05D005228 3.0e-13 79.0 79 58.2
Sp4g19340 Schrenkiella parvula HOM05D004355 ORTHO05D005228 5.2e-13 78.2 84 58.3
Lj1g0007988 Lotus japonicus HOM05D004355 ORTHO05D005228 6.8e-13 77.8 87 57.5
Manes.08G008600 Manihot esculenta HOM05D004355 ORTHO05D005228 6.8e-13 77.8 72 56.9
QL07p044062 Quercus lobata HOM05D004355 ORTHO05D005228 6.8e-13 77.8 94 51.1
Nn2g13729 Nelumbo nucifera HOM05D004355 ORTHO05D005228 8.8e-13 77.4 63 63.5
Sed0012541 Sechium edule HOM05D004355 ORTHO05D005228 1.5e-12 76.6 91 52.7
PGR004G0459 Punica granatum HOM05D004355 ORTHO05D005228 2.0e-12 76.3 81 54.3
Ca_08851_v3 Cicer arietinum L. HOM05D004355 ORTHO05D005228 3.4e-12 75.5 76 55.3
Peaxi162Scf00123g01123 Petunia axillaris HOM05D004355 ORTHO05D005228 4.4e-12 75.1 77 54.5
CSS0033330 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 5.7e-12 74.7 67 58.2
CSS0041806 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 5.7e-12 74.7 67 58.2
Hma1.2p1_1099F.1_g256870 Hydrangea macrophylla HOM05D004355 ORTHO05D005228 5.7e-12 74.7 71 56.3
ClCG04G009160 Citrullus lanatus HOM05D004355 ORTHO05D005228 7.5e-12 74.3 91 50.5
Sabra16G0096600 Salix brachista HOM05D004355 ORTHO05D005228 7.5e-12 74.3 63 61.9
CiPaw.10G132700 Carya illinoinensis HOM05D004355 ORTHO05D005228 9.8e-12 73.9 86 57.0
MELO3C014220.2 Cucumis melo HOM05D004355 ORTHO05D005228 9.8e-12 73.9 75 56.0
CsaV3_6G039740 Cucumis sativus L. HOM05D004355 ORTHO05D005228 9.8e-12 73.9 75 56.0
Potri.016G091400 Populus trichocarpa HOM05D004355 ORTHO05D005228 9.8e-12 73.9 63 61.9
Aqoxy1G01202 Aquilegia oxysepala HOM05D004355 ORTHO05D005228 2.2e-11 72.8 63 60.3
Gorai.002G162400 Gossypium raimondii HOM05D004355 ORTHO05D005228 2.2e-11 72.8 76 56.6
Gohir.D01G128600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 4.8e-11 71.6 76 55.3
Aa31LG5G22300 Aethionema arabicum HOM05D004355 ORTHO05D005228 6.3e-11 71.2 76 51.3
Manes.09G063900 Manihot esculenta HOM05D004355 ORTHO05D005228 6.3e-11 71.2 72 55.6
Dinv35767 Davidia involucrata HOM05D004355 ORTHO05D003235 1.1e-10 70.5 72 52.8
Gohir.A01G139600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.1e-10 70.5 76 55.3
Nn2g11520 Nelumbo nucifera HOM05D004355 ORTHO05D005228 1.1e-10 70.5 82 53.7
PGSC0003DMG400035240 Solanum tuberosum HOM05D004355 ORTHO05D005228 1.1e-10 70.5 61 60.7
TAR369G0267 Trochodendron aralioides HOM05D004355 ORTHO05D005228 1.1e-10 70.5 82 52.4
COL.COLO4_26990 Corchorus olitorius HOM05D004355 ORTHO05D005228 1.4e-10 70.1 80 52.5
Ciclev10011674m.g Citrus clementina HOM05D004355 ORTHO05D005228 1.8e-10 69.7 64 54.7
vmacro08776 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 1.8e-10 69.7 75 54.7
CSS0012498 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 2.4e-10 69.3 69 55.1
AUR62039881 Chenopodium quinoa HOM05D004355 ORTHO05D005228 2.4e-10 69.3 83 55.4
Duzib128G1889 Durio zibethinus HOM05D004355 ORTHO05D005228 2.4e-10 69.3 80 51.2
TAR633G2000 Trochodendron aralioides HOM05D004355 ORTHO05D005228 4.1e-10 68.6 83 51.8
Duzib093G1016 Durio zibethinus HOM05D004355 ORTHO05D005228 5.4e-10 68.2 76 52.6
Duzib106G0643 Durio zibethinus HOM05D004355 ORTHO05D005228 5.4e-10 68.2 76 52.6
Gohir.A04G073200 Gossypium hirsutum HOM05D004355 ORTHO05D005228 5.4e-10 68.2 76 51.3
Gohir.A09G148600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 5.4e-10 68.2 81 50.6
Gohir.D09G144400 Gossypium hirsutum HOM05D004355 ORTHO05D005228 7.0e-10 67.8 76 51.3
Gorai.006G165700 Gossypium raimondii HOM05D004355 ORTHO05D005228 7.0e-10 67.8 76 51.3
PSO339G4715 Papaver somniferum HOM05D004355 ORTHO05D005228 7.0e-10 67.8 79 58.2
PSO801G0805 Papaver somniferum HOM05D004355 ORTHO05D005228 7.0e-10 67.8 79 58.2
Thecc.05G062900 Theobroma cacao HOM05D004355 ORTHO05D005228 9.1e-10 67.4 76 52.6
TAR636G0816 Trochodendron aralioides HOM05D004355 ORTHO05D005228 9.1e-10 67.4 83 47.0
Gorai.009G416200 Gossypium raimondii HOM05D004355 ORTHO05D005228 1.2e-09 67.0 66 54.5
Nitab4.5_0002963g0100 Nicotiana tabacum HOM05D004355 ORTHO05D005228 1.2e-09 67.0 60 58.3
AL693U10010 Arabidopsis lyrata HOM05D004355 ORTHO05D005228 1.6e-09 66.6 85 52.9
Gohir.D04G112100 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.6e-09 66.6 78 55.1
Cpa.g.sc92.114 Carica papaya HOM05D004355 ORTHO05D005228 2.0e-09 66.2 84 50.0
Rhsim04G0145100 Rhododendron simsii HOM05D004355 ORTHO05D005228 2.0e-09 66.2 83 48.2
THA.LOC104823460 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 2.0e-09 66.2 74 48.6
AL4G33360 Arabidopsis lyrata HOM05D004355 ORTHO05D005228 3.5e-09 65.5 85 51.8
vmacro20020 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 3.5e-09 65.5 62 54.8
MSTRG.26701 Avicennia marina HOM05D004355 ORTHO05D005228 4.5e-09 65.1 62 59.7
AT2G37035 Arabidopsis thaliana HOM05D004355 ORTHO05D005228 7.7e-09 64.3 74 50.0
Solyc09g007950.3 Solanum lycopersicum HOM05D004355 ORTHO05D005228 1.0e-08 63.9 46 73.9
Sopen09g002770 Solanum pennellii HOM05D004355 ORTHO05D005228 1.0e-08 63.9 46 73.9
BcaC02g11829 Brassica carinata HOM05D004355 ORTHO05D005228 1.7e-08 63.2 74 48.6
A05p08800 Brassica napus HOM05D004355 ORTHO05D005228 1.7e-08 63.2 74 48.6
C04p10920 Brassica napus HOM05D004355 ORTHO05D005228 1.7e-08 63.2 74 48.6
BolC4t22685H Brassica oleracea HOM05D004355 ORTHO05D005228 1.7e-08 63.2 74 48.6
BraA05t19847Z Brassica rapa HOM05D004355 ORTHO05D005228 1.7e-08 63.2 74 48.6
Carub.0004s1891 Capsella rubella HOM05D004355 ORTHO05D005228 2.2e-08 62.8 79 53.2
DCAR_009301 Daucus carota HOM05D004355 ORTHO05D005228 2.9e-08 62.4 71 52.1
Ah.08g211740 Amaranthus hybridus HOM05D004355 ORTHO05D005228 3.8e-08 62.0 80 47.5
CARHR131530 Cardamine hirsuta HOM05D004355 ORTHO05D005228 3.8e-08 62.0 89 51.7
Migut.L01688 Erythranthe guttata HOM05D004355 ORTHO05D005228 5.0e-08 61.6 66 53.0
THA.LOC104806491 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 6.5e-08 61.2 73 47.9
Cc06_g04030 Coffea canephora HOM05D004355 ORTHO05D005228 1.1e-07 60.5 61 50.8
EL10Ac7g16576 Beta vulgaris HOM05D004355 ORTHO05D005228 2.5e-07 59.3 47 66.0
SGA_v2.0_scaffold75G24855 Striga asiatica HOM05D004355 ORTHO05D005228 2.5e-07 59.3 61 50.8
Dinv23629 Davidia involucrata HOM05D004355 ORTHO05D005228 3.2e-07 58.9 78 46.2
PGR004G2422 Punica granatum HOM05D004355 ORTHO05D005228 3.2e-07 58.9 89 44.9
SalBow5G3882 Salvia bowleyana HOM05D004355 ORTHO05D005228 3.2e-07 58.9 63 52.4
SalBow5G3919 Salvia bowleyana HOM05D004355 ORTHO05D005228 3.2e-07 58.9 63 52.4
Sc02g0001740 Simmondsia chinensis HOM05D004355 ORTHO05D005228 3.2e-07 58.9 81 48.1
Dinv34489 Davidia involucrata HOM05D004355 ORTHO05D005228 4.2e-07 58.5 78 44.9
Rhsim05G0179400 Rhododendron simsii HOM05D004355 ORTHO05D005228 5.5e-07 58.2 62 51.6
CiPaw.09G174200 Carya illinoinensis HOM05D004355 ORTHO05D005228 2.7e-06 55.8 82 48.8
Nitab4.5_0000101g0300 Nicotiana tabacum HOM05D004355 ORTHO05D005228 3.6e-06 55.5 40 67.5


User provided reference genes

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