Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.3e-51 205.3 104 100.0
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 6.2e-33 144.1 71 97.2
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 8.1e-33 143.7 71 97.2
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 2.5e-13 79.0 74 62.2
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.8e-11 70.5 76 55.3
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.1e-10 70.1 73 49.3
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 1.1e-10 70.1 55 61.8
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 2.5e-10 68.9 58 60.3
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 2.5e-10 68.9 55 63.6
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.3e-10 68.2 71 49.3
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 5.7e-10 67.8 75 53.3
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 5.7e-10 67.8 69 55.1
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 9.7e-10 67.0 58 60.3
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 9.7e-10 67.0 63 55.6
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 2.8e-09 65.5 64 54.7
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 3.7e-09 65.1 74 43.2
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 6.3e-09 64.3 52 61.5
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.1e-08 63.5 70 47.1
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.1e-08 63.5 70 47.1
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.8e-08 62.8 49 65.3
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.4e-08 62.4 52 57.7
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.4e-08 62.4 52 57.7
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.4e-08 62.4 51 52.9
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 2.4e-08 62.4 55 61.8
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 2.4e-08 62.4 55 61.8
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 2.4e-08 62.4 76 44.7
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 2.4e-08 62.4 76 44.7
FAN07G1623 Fragaria x ananassa HOM05D008114 ORTHO05D010089 6.9e-08 60.8 74 40.5
FAN12G0147 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.5e-07 59.7 51 51.0
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 3.4e-07 58.5 69 47.8
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 3.4e-07 58.5 51 52.9
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 4.5e-07 58.2 69 46.4
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 4.5e-07 58.2 56 51.8
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 5.9e-07 57.8 70 47.1
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.9e-07 57.8 57 56.1
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.9e-07 57.8 57 56.1
Migut.I00449 Erythranthe guttata HOM05D008114 ORTHO05D010089 7.7e-07 57.4 68 44.1
THA.LOC104809237 Tarenaya hassleriana HOM05D013984 ORTHO05D010089 7.7e-07 57.4 66 45.5
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.0e-06 57.0 76 44.7
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.3e-06 56.6 73 46.6
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 1.7e-06 56.2 68 48.5
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 2.2e-06 55.8 55 50.9
Aa31LG4G11900 Aethionema arabicum HOM05D013984 ORTHO05D010089 3.8e-06 55.1 62 51.6
CsaV3_5G034590 Cucumis sativus L. HOM05D022275 ORTHO05D010089 3.8e-06 55.1 52 50.0
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 5.0e-06 54.7 55 50.9
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 8.5e-06 53.9 63 49.2


User provided reference genes

Program Settings