Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2273 Fragaria x ananassa HOM05D007758 ORTHO05D009788 7.1e-24 113.2 63 100.0
FAN18G3236 Fragaria x ananassa HOM05D007758 ORTHO05D009788 7.1e-24 113.2 63 100.0
RcHm_v2.0_Chr6g0259711 Rosa chinensis HOM05D007758 ORTHO05D009788 1.9e-21 105.1 53 96.2
FAN08G1799 Fragaria x ananassa HOM05D007758 ORTHO05D009788 2.5e-21 104.8 63 98.4
Prupe.5G051100 Prunus persica HOM05D007758 ORTHO05D009788 5.7e-21 103.6 55 90.9
MD04G1056100 Malus domestica HOM05D007758 ORTHO05D009788 4.1e-19 97.4 53 86.8
Hma1.2p1_1673F.1_g296900 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 1.6e-15 85.5 52 78.8
AL7G37620 Arabidopsis lyrata HOM05D007758 ORTHO05D009788 7.9e-15 83.2 52 76.9
RcHm_v2.0_Chr7g0205921 Rosa chinensis HOM05D007758 ORTHO05D009788 7.9e-15 83.2 63 74.6
Sed0000899 Sechium edule HOM05D007758 ORTHO05D009788 1.0e-14 82.8 52 75.0
Carub.0007s2429 Capsella rubella HOM05D007758 ORTHO05D009788 1.3e-14 82.4 53 73.6
COL.COLO4_06700 Corchorus olitorius HOM05D007758 ORTHO05D009788 1.3e-14 82.4 51 76.5
Nn1g00706 Nelumbo nucifera HOM05D007758 ORTHO05D009788 1.8e-14 82.0 51 80.4
TAR629G0116 Trochodendron aralioides HOM05D007758 ORTHO05D009788 1.8e-14 82.0 48 85.4
AT4G17085 Arabidopsis thaliana HOM05D007758 ORTHO05D009788 2.3e-14 81.6 52 75.0
ClCG09G012550 Citrullus lanatus HOM05D007758 ORTHO05D009788 2.3e-14 81.6 52 73.1
PGSC0003DMG400001836 Solanum tuberosum HOM05D007758 ORTHO05D009788 2.3e-14 81.6 51 74.5
CARHR223670 Cardamine hirsuta HOM05D007758 ORTHO05D009788 3.0e-14 81.3 52 75.0
Peaxi162Scf00715g00026 Petunia axillaris HOM05D007758 ORTHO05D009788 3.0e-14 81.3 51 76.5
THA.LOC104814457 Tarenaya hassleriana HOM05D007758 ORTHO05D009788 3.0e-14 81.3 53 75.5
CANSAT21G1691 Cannabis sativa HOM05D007758 ORTHO05D009788 3.9e-14 80.9 61 72.1
Thecc.03G237200 Theobroma cacao HOM05D007758 ORTHO05D009788 3.9e-14 80.9 61 68.9
TAR633G2270 Trochodendron aralioides HOM05D007758 ORTHO05D009788 5.1e-14 80.5 51 78.4
Lalb_Chr09g0329711 Lupinus albus HOM05D007758 ORTHO05D009788 6.7e-14 80.1 49 79.6
Hma1.2p1_0414F.1_g147490 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 8.7e-14 79.7 51 74.5
Manes.15G171100 Manihot esculenta HOM05D007758 ORTHO05D009788 8.7e-14 79.7 51 78.4
GSVIVG01013273001 Vitis vinifera HOM05D007758 ORTHO05D009788 1.1e-13 79.3 51 78.4
BcaC07g38037 Brassica carinata HOM05D007758 ORTHO05D009788 1.5e-13 79.0 51 74.5
A08p12870 Brassica napus HOM05D007758 ORTHO05D009788 1.5e-13 79.0 51 74.5
BolC8t48433H Brassica oleracea HOM05D007758 ORTHO05D009788 1.5e-13 79.0 51 74.5
BraA08t33271Z Brassica rapa HOM05D007758 ORTHO05D009788 1.5e-13 79.0 51 74.5
Ca_28157_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 1.5e-13 79.0 54 74.1
Cc08_g01520 Coffea canephora HOM05D007758 ORTHO05D009788 1.5e-13 79.0 58 70.7
CAN.G1445.11 Capsicum annuum HOM05D007758 ORTHO05D009788 1.9e-13 78.6 51 72.5
A03p50300 Brassica napus HOM05D007758 ORTHO05D009788 2.5e-13 78.2 51 72.5
BraA03t14119Z Brassica rapa HOM05D007758 ORTHO05D009788 2.5e-13 78.2 51 72.5
PGR042G0139 Punica granatum HOM05D007758 ORTHO05D009788 2.5e-13 78.2 51 74.5
Lsat_1_v5_gn_6_90760 Lactuca sativa HOM05D007758 ORTHO05D009788 3.3e-13 77.8 51 74.5
Phvul.003G226800 Phaseolus vulgaris HOM05D007758 ORTHO05D009788 3.3e-13 77.8 61 68.9
Hund11300 Selenicereus undatus HOM05D007758 ORTHO05D009788 3.3e-13 77.8 51 74.5
Ca_22029_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 4.3e-13 77.4 53 73.6
Thhalv10026742m.g Eutrema salsugineum HOM05D007758 ORTHO05D009788 4.3e-13 77.4 51 72.5
Lj4g0024059 Lotus japonicus HOM05D007758 ORTHO05D009788 4.3e-13 77.4 51 74.5
CsaV3_3G049700 Cucumis sativus L. HOM05D007758 ORTHO05D009788 5.7e-13 77.0 63 61.9
Gohir.D09G192200 Gossypium hirsutum HOM05D007758 ORTHO05D009788 5.7e-13 77.0 61 68.9
Gorai.006G215000 Gossypium raimondii HOM05D007758 ORTHO05D009788 5.7e-13 77.0 61 68.9
Oeu035101.1 Olea europaea HOM05D007758 ORTHO05D009788 5.7e-13 77.0 53 77.4
BcaB04g18382 Brassica carinata HOM05D007758 ORTHO05D009788 7.4e-13 76.6 46 78.3
DCAR_008312 Daucus carota HOM05D007758 ORTHO05D009788 7.4e-13 76.6 51 74.5
Atru.chr9.1149 Acer truncatum HOM05D007758 ORTHO05D009788 9.7e-13 76.3 49 71.4
CSS0001994 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 9.7e-13 76.3 45 82.2
CSS0049692 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 9.7e-13 76.3 45 82.2
Ca_03905_v3 Cicer arietinum L. HOM05D000421 ORTHO05D009788 1.3e-12 75.9 51 76.5
Glyma.17G150000 Glycine max HOM05D007758 ORTHO05D009788 1.3e-12 75.9 53 69.8
Gohir.A09G197600 Gossypium hirsutum HOM05D007758 ORTHO05D009788 1.3e-12 75.9 61 73.8
arahy.Tifrunner.gnm1.ann1.24R365 Arachis hypogaea HOM05D007758 ORTHO05D009788 1.6e-12 75.5 51 72.5
arahy.Tifrunner.gnm1.ann1.EY31BM Arachis hypogaea HOM05D007758 ORTHO05D009788 1.6e-12 75.5 51 72.5
C07p48590 Brassica napus HOM05D007758 ORTHO05D009788 1.6e-12 75.5 51 70.6
BolC7t45367H Brassica oleracea HOM05D007758 ORTHO05D009788 1.6e-12 75.5 51 70.6
MELO3C003346.2 Cucumis melo HOM05D007758 ORTHO05D009788 1.6e-12 75.5 52 69.2
BcaC06g33532 Brassica carinata HOM05D007758 ORTHO05D009788 2.2e-12 75.1 51 70.6
BcaNung04665 Brassica carinata HOM05D007758 ORTHO05D009788 2.2e-12 75.1 51 70.6
Migut.E00814 Erythranthe guttata HOM05D007758 ORTHO05D009788 2.2e-12 75.1 51 72.5
Medtr3g053460 Medicago truncatula HOM05D007758 ORTHO05D009788 2.8e-12 74.7 53 69.8
TPR.G17254 Trifolium pratense HOM05D007758 ORTHO05D009788 3.7e-12 74.3 53 69.8
CiPaw.12G057000 Carya illinoinensis HOM05D007758 ORTHO05D009788 4.8e-12 73.9 51 72.5
Psat4g076760 Pisum sativum HOM05D007758 ORTHO05D009788 4.8e-12 73.9 46 80.4
TWI60G0956 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 4.8e-12 73.9 53 66.0
Cfa012357 Carpinus fangiana HOM05D007758 ORTHO05D009788 6.3e-12 73.6 45 75.6
Medtr4g099120 Medicago truncatula HOM05D007758 ORTHO05D009788 6.3e-12 73.6 53 69.8
Zm00001eb180740 Zea mays HOM05D007758 ORTHO05D009788 1.1e-11 72.8 58 58.6
Glyma.05G067900 Glycine max HOM05D007758 ORTHO05D009788 1.4e-11 72.4 61 63.9
PSO782G2991 Papaver somniferum HOM05D007758 ORTHO05D009788 1.4e-11 72.4 52 65.4
Ciclev10023239m.g Citrus clementina HOM05D007758 ORTHO05D009788 1.8e-11 72.0 53 67.9
Oeu017314.1 Olea europaea HOM05D007758 ORTHO05D009788 1.5e-10 68.9 53 71.7
Potri.003G085400 Populus trichocarpa HOM05D007758 ORTHO05D009788 2.0e-10 68.6 75 54.7
Nitab4.5_0010949g0010 Nicotiana tabacum HOM05D007758 ORTHO05D009788 3.4e-10 67.8 41 75.6
Haze_08336 Corylus avellana HOM05D007758 ORTHO05D009788 5.9e-10 67.0 41 75.6
CiPaw.09G190000 Carya illinoinensis HOM05D007758 ORTHO05D009788 7.7e-10 66.6 51 66.7
unitig_744.g24437 Utricularia gibba HOM05D007758 ORTHO05D009788 7.7e-10 66.6 93 44.1
CiPaw.10G048600 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.7e-09 65.5 51 66.7
CiPaw.02G038300 Carya illinoinensis HOM05D007758 ORTHO05D009788 2.2e-09 65.1 51 64.7
CiPaw.14G095500 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.9e-08 62.0 51 62.7
BolC7t45365H Brassica oleracea HOM05D007758 ORTHO05D009788 5.5e-08 60.5 37 75.7
RcHm_v2.0_Chr7g0207671 Rosa chinensis HOM05D007758 ORTHO05D009788 5.5e-08 60.5 55 65.5
CiPaw.14G095700 Carya illinoinensis HOM05D007758 ORTHO05D009788 4.6e-07 57.4 46 63.0


User provided reference genes

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