Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G3209 Fragaria x ananassa HOM05D004272 ORTHO05D005020 1.3e-210 736.1 357 100.0
FvH4_5g14850 Fragaria vesca HOM05D004272 ORTHO05D005020 7.0e-209 730.3 357 98.9
FAN08G2250 Fragaria x ananassa HOM05D004272 ORTHO05D005020 2.0e-200 702.2 357 95.5
FAN13G2363 Fragaria x ananassa HOM05D004272 ORTHO05D005020 4.3e-198 694.5 359 94.4
RcHm_v2.0_Chr7g0181531 Rosa chinensis HOM05D004272 ORTHO05D005020 1.1e-177 626.7 356 85.1
RcHm_v2.0_Chr3g0456471 Rosa chinensis HOM05D004272 ORTHO05D005020 3.3e-134 482.3 360 68.1
Prupe.8G052200 Prunus persica HOM05D004272 ORTHO05D005020 6.5e-106 388.3 338 61.2
MD10G1045300 Malus domestica HOM05D004272 ORTHO05D005020 7.2e-105 384.8 336 60.4
FAN24G2414 Fragaria x ananassa HOM05D004272 ORTHO05D005020 1.6e-104 383.6 332 60.5
FvH4_2g12360 Fragaria vesca HOM05D004272 ORTHO05D005020 1.0e-103 380.9 330 60.6
MD09G1287400 Malus domestica HOM05D004272 ORTHO05D005020 3.0e-103 379.4 322 61.2
FAN20G0830 Fragaria x ananassa HOM05D004272 ORTHO05D005020 5.2e-103 378.6 330 60.9
RcHm_v2.0_Chr6g0272381 Rosa chinensis HOM05D004272 ORTHO05D005020 3.3e-102 375.9 338 60.1
GSVIVG01034890001 Vitis vinifera HOM05D004272 ORTHO05D005020 3.3e-102 375.9 324 62.3
FAN27G2909 Fragaria x ananassa HOM05D004272 ORTHO05D005020 5.7e-102 375.2 330 60.9
Manes.18G099100 Manihot esculenta HOM05D004272 ORTHO05D005020 1.3e-101 374.0 342 59.9
CiPaw.15G083400 Carya illinoinensis HOM05D004272 ORTHO05D005020 1.1e-100 370.9 336 59.2
MELO3C018159.2 Cucumis melo HOM05D004272 ORTHO05D005020 1.8e-100 370.2 341 58.7
CiPaw.16G063800 Carya illinoinensis HOM05D004272 ORTHO05D005020 3.1e-100 369.4 336 59.5
VMungo0720G1438 Vigna mungo HOM05D004272 ORTHO05D005020 5.3e-100 368.6 340 56.2
CANSAT25G2208 Cannabis sativa HOM05D004272 ORTHO05D005020 1.6e-99 367.1 321 58.9
Cc00_g04120 Coffea canephora HOM05D004272 ORTHO05D005020 7.7e-99 364.8 337 60.5
QL02p034274 Quercus lobata HOM05D004272 ORTHO05D005020 1.0e-98 364.4 321 61.1
Sabra13G0097600 Salix brachista HOM05D004272 ORTHO05D005020 1.3e-98 364.0 342 57.3
Sed0022323 Sechium edule HOM05D004272 ORTHO05D005020 1.3e-98 364.0 338 57.4
Dinv12903 Davidia involucrata HOM05D004272 ORTHO05D005020 2.2e-98 363.2 333 60.4
Thecc.08G200200 Theobroma cacao HOM05D004272 ORTHO05D005020 2.2e-98 363.2 333 58.6
Oeu030010.1 Olea europaea HOM05D004272 ORTHO05D005020 8.5e-98 361.3 335 59.1
Eucgr.F04145 Eucalyptus grandis HOM05D004272 ORTHO05D005020 1.5e-97 360.5 344 56.1
Gohir.A09G116800 Gossypium hirsutum HOM05D004272 ORTHO05D005020 1.9e-97 360.1 330 58.8
Gorai.006G131400 Gossypium raimondii HOM05D004272 ORTHO05D005020 2.5e-97 359.8 333 57.7
CsaV3_7G024250 Cucumis sativus L. HOM05D004272 ORTHO05D005020 3.2e-97 359.4 322 59.9
Aa31LG4G8760 Aethionema arabicum HOM05D004272 ORTHO05D005020 9.4e-97 357.8 314 60.5
Lj5g0022070 Lotus japonicus HOM05D004272 ORTHO05D005020 9.4e-97 357.8 337 57.3
Rhsim11G0061700 Rhododendron simsii HOM05D004272 ORTHO05D005020 1.2e-96 357.5 347 56.2
Rhsim11G0063200 Rhododendron simsii HOM05D004272 ORTHO05D005020 1.2e-96 357.5 347 56.2
Gohir.D09G113700 Gossypium hirsutum HOM05D004272 ORTHO05D005020 1.6e-96 357.1 328 58.2
THA.LOC104800104 Tarenaya hassleriana HOM05D004272 ORTHO05D005020 1.6e-96 357.1 312 60.9
Prupe.1G402600 Prunus persica HOM05D004272 ORTHO05D005020 2.1e-96 356.7 328 56.7
Carub.0002s1862 Capsella rubella HOM05D004272 ORTHO05D005020 2.7e-96 356.3 322 58.7
Oeu004773.1 Olea europaea HOM05D004272 ORTHO05D005020 2.7e-96 356.3 333 58.6
Ciclev10001727m.g Citrus clementina HOM05D004272 ORTHO05D005020 4.7e-96 355.5 340 58.2
Aqoxy6G00139 Aquilegia oxysepala HOM05D004272 ORTHO05D005020 6.1e-96 355.1 332 56.0
Peaxi162Scf00268g01426 Petunia axillaris HOM05D004272 ORTHO05D005020 6.1e-96 355.1 341 56.3
Phvul.007G087900 Phaseolus vulgaris HOM05D004272 ORTHO05D005020 6.1e-96 355.1 338 54.7
Potri.013G115400 Populus trichocarpa HOM05D004272 ORTHO05D005020 1.4e-95 354.0 342 56.1
Lalb_Chr06g0161911 Lupinus albus HOM05D004272 ORTHO05D005020 1.8e-95 353.6 331 55.6
Cpa.g.sc64.134 Carica papaya HOM05D004272 ORTHO05D005020 3.0e-95 352.8 341 56.0
MD05G1039700 Malus domestica HOM05D004272 ORTHO05D005020 5.2e-95 352.1 318 59.4
Atru.chr13.1851 Acer truncatum HOM05D004272 ORTHO05D005020 8.8e-95 351.3 375 53.3
CSS0015299 Camellia sinensis var. sinensis HOM05D004272 ORTHO05D005020 8.8e-95 351.3 337 56.7
Glyma.10G218100 Glycine max HOM05D004272 ORTHO05D005020 1.2e-94 350.9 336 54.5
TPR.G15693 Trifolium pratense HOM05D004272 ORTHO05D005020 1.5e-94 350.5 322 57.1
Nitab4.5_0006059g0040 Nicotiana tabacum HOM05D004272 ORTHO05D005020 2.6e-94 349.7 315 60.6
Sopen11g008950 Solanum pennellii HOM05D004272 ORTHO05D005020 4.4e-94 349.0 338 57.7
Haze_17897 Corylus avellana HOM05D004272 ORTHO05D005020 5.7e-94 348.6 393 51.4
Actinidia02597 Actinidia chinensis HOM05D004272 ORTHO05D005020 1.3e-93 347.4 336 57.4
Migut.N03339 Erythranthe guttata HOM05D004272 ORTHO05D005020 1.7e-93 347.1 319 59.2
Duzib116G0407 Durio zibethinus HOM05D004272 ORTHO05D005020 2.8e-93 346.3 380 52.1
Medtr1g096990 Medicago truncatula HOM05D004272 ORTHO05D005020 3.7e-93 345.9 336 54.8
Solyc06g065480.4 Solanum lycopersicum HOM05D004272 ORTHO05D005020 3.7e-93 345.9 338 56.2
arahy.Tifrunner.gnm1.ann1.6Q1IL7 Arachis hypogaea HOM05D004272 ORTHO05D005020 4.8e-93 345.5 345 55.1
arahy.Tifrunner.gnm1.ann1.CBRY2G Arachis hypogaea HOM05D004272 ORTHO05D005020 6.3e-93 345.1 339 55.5
C06p45930 Brassica napus HOM05D004272 ORTHO05D005020 6.3e-93 345.1 325 56.3
Solyc11g016990.3 Solanum lycopersicum HOM05D004272 ORTHO05D005020 8.3e-93 344.7 327 58.4
Ca_10628_v3 Cicer arietinum L. HOM05D004272 ORTHO05D005020 1.1e-92 344.4 312 57.4
BcaC08g46618 Brassica carinata HOM05D004272 ORTHO05D005020 1.4e-92 344.0 350 54.6
Hund27072 Selenicereus undatus HOM05D004272 ORTHO05D005020 1.4e-92 344.0 335 55.5
Sc01g0001660 Simmondsia chinensis HOM05D004272 ORTHO05D005020 1.4e-92 344.0 314 58.9
Thhalv10018624m.g Eutrema salsugineum HOM05D004272 ORTHO05D005020 2.4e-92 343.2 325 56.6
Sopen06g023970 Solanum pennellii HOM05D004272 ORTHO05D005020 4.1e-92 342.4 337 57.9
BcaC08g46620 Brassica carinata HOM05D004272 ORTHO05D005020 7.0e-92 341.7 325 55.7
BolC6t39646H Brassica oleracea HOM05D004272 ORTHO05D005020 7.0e-92 341.7 325 55.7
Rhsim06G0099300 Rhododendron simsii HOM05D004272 ORTHO05D005020 7.0e-92 341.7 389 49.9
Sp5g26920 Schrenkiella parvula HOM05D004272 ORTHO05D005020 7.0e-92 341.7 312 57.7
SpUn0020_0060 Schrenkiella parvula HOM05D004272 ORTHO05D005020 7.0e-92 341.7 312 57.7
Migut.C01228 Erythranthe guttata HOM05D004272 ORTHO05D005020 9.1e-92 341.3 319 58.0
PSO170G2262 Papaver somniferum HOM05D004272 ORTHO05D005020 1.6e-91 340.5 345 54.8
A07p38020 Brassica napus HOM05D004272 ORTHO05D005020 2.0e-91 340.1 347 52.4
BraA07t31367Z Brassica rapa HOM05D004272 ORTHO05D005020 2.0e-91 340.1 347 52.7
TAR381G1009 Trochodendron aralioides HOM05D004272 ORTHO05D005020 4.5e-91 339.0 293 61.4
Glyma.20G173700 Glycine max HOM05D004272 ORTHO05D005020 2.2e-90 336.7 339 53.4
Hma1.2p1_0510F.1_g168790 Hydrangea macrophylla HOM05D004272 ORTHO05D005020 2.9e-90 336.3 321 57.3
SalBow6G4901 Salvia bowleyana HOM05D004272 ORTHO05D005020 3.8e-90 335.9 320 56.2
HPP92_003132 Vanilla planifolia HOM05D004272 ORTHO05D005020 5.0e-90 335.5 314 55.1
AL2G31440 Arabidopsis lyrata HOM05D004272 ORTHO05D005020 6.5e-90 335.1 337 54.0
AT1G71860 Arabidopsis thaliana HOM05D004272 ORTHO05D005020 1.1e-89 334.3 320 55.9
SalBow6G0059 Salvia bowleyana HOM05D004272 ORTHO05D005020 5.5e-89 332.0 324 55.9
ATR0687G002 Amborella trichopoda HOM05D004272 ORTHO05D005020 7.2e-89 331.6 318 55.7
Lsat_1_v5_gn_5_157280 Lactuca sativa HOM05D004272 ORTHO05D005020 7.2e-89 331.6 324 57.7
PSO170G2167 Papaver somniferum HOM05D004272 ORTHO05D005020 1.6e-88 330.5 326 55.2
unitig_61.g26072 Utricularia gibba HOM05D004272 ORTHO05D005020 2.1e-88 330.1 342 53.2
HanXRQChr13g0388201 Helianthus annuus HOM05D004272 ORTHO05D005020 8.0e-88 328.2 324 56.8
PSO782G4024 Papaver somniferum HOM05D004272 ORTHO05D005020 5.7e-86 322.0 340 52.4
DCAR_010068 Daucus carota HOM05D004272 ORTHO05D005020 7.5e-86 321.6 306 57.5
CAN.G199.25 Capsicum annuum HOM05D004272 ORTHO05D005020 1.1e-84 317.8 269 61.3
CARHR289070 Cardamine hirsuta HOM05D004272 ORTHO05D005020 5.4e-84 315.5 265 61.1
EL10Ac1g00062 Beta vulgaris HOM05D004272 ORTHO05D005020 1.6e-83 313.9 323 53.6
Hund16809 Selenicereus undatus HOM05D004272 ORTHO05D005020 1.6e-83 313.9 323 53.9
ClCG09G010370 Citrullus lanatus HOM05D004272 ORTHO05D005020 2.9e-82 309.7 308 54.9
Nitab4.5_0000159g0070 Nicotiana tabacum HOM05D004272 ORTHO05D005020 1.5e-81 307.4 272 61.8
TWI60G0092 Tripterygium wilfordii HOM05D004272 ORTHO05D005020 2.5e-81 306.6 326 54.0
Nitab4.5_0003518g0050 Nicotiana tabacum HOM05D004272 ORTHO05D005020 3.3e-81 306.2 284 60.6
AUR62004668 Chenopodium quinoa HOM05D004272 ORTHO05D005020 4.3e-81 305.8 266 61.3
vmacro12508 Vaccinium macrocarpon HOM05D004272 ORTHO05D005020 9.5e-81 304.7 314 53.8
Lj7C302G8 Lonicera japonica HOM05D004272 ORTHO05D005020 1.2e-80 304.3 388 47.4
CAN.G61.12 Capsicum annuum HOM05D004272 ORTHO05D005020 3.7e-77 292.7 260 60.8
Manes.02G190000 Manihot esculenta HOM05D004272 ORTHO05D005020 3.7e-77 292.7 222 67.6
Nn5g27830 Nelumbo nucifera HOM05D004272 ORTHO05D005020 6.4e-77 292.0 320 53.1
Hund16808 Selenicereus undatus HOM05D004272 ORTHO05D005020 1.6e-75 287.3 309 50.2
AUR62023587 Chenopodium quinoa HOM05D004272 ORTHO05D005020 1.0e-74 284.6 252 60.7
SGA_v2.0_scaffold149G36610 Striga asiatica HOM05D004272 ORTHO05D005020 1.3e-74 284.3 381 45.9
ECA248G3752 Erigeron canadensis HOM05D004272 ORTHO05D005020 6.2e-72 275.4 314 49.7
DCAR_014268 Daucus carota HOM05D004272 ORTHO05D005020 1.0e-71 274.6 368 45.4
HanXRQChr13g0388211 Helianthus annuus HOM05D004272 ORTHO05D005020 5.8e-70 268.9 296 52.4
Ah.05g177840 Amaranthus hybridus HOM05D004272 ORTHO05D005020 3.2e-68 263.1 311 48.9
arahy.Tifrunner.gnm1.ann1.E3548W Arachis hypogaea HOM05D004272 ORTHO05D005020 1.3e-66 257.7 238 58.4
MELO3C023674.2 Cucumis melo HOM05D004272 ORTHO05D005020 8.6e-66 255.0 253 55.7
Os12g0174800 Oryza sativa ssp. japonica HOM05D004272 ORTHO05D005020 1.1e-65 254.6 305 46.2
SMO347G0125 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 5.6e-65 252.3 304 44.4
vmacro00781 Vaccinium macrocarpon HOM05D004272 ORTHO05D005020 7.3e-65 251.9 388 41.5
Pp3c13_6130 Physcomitrium patens HOM05D004272 ORTHO05D005020 3.6e-64 249.6 316 44.0
Mapoly0167s0026 Marchantia polymorpha HOM05D004272 ORTHO05D005020 5.2e-63 245.7 260 48.5
Psat6g189360 Pisum sativum HOM05D004272 ORTHO05D005020 6.4e-61 238.8 254 52.0
Nitab4.5_0029014g0010 Nicotiana tabacum HOM05D004272 ORTHO05D005020 3.2e-60 236.5 275 50.5
Pp3c3_2290 Physcomitrium patens HOM05D004272 ORTHO05D005020 3.2e-60 236.5 312 44.6
SHI09047 Sapria himalayana HOM05D004272 ORTHO05D005020 9.2e-60 235.0 262 48.9
Os11g0180200 Oryza sativa ssp. japonica HOM05D004272 ORTHO05D005020 4.7e-56 222.6 247 52.6
ECA248G0749 Erigeron canadensis HOM05D004272 ORTHO05D005020 8.4e-53 211.8 282 46.8
Zm00001eb091350 Zea mays HOM05D004272 ORTHO05D005020 4.3e-49 199.5 309 41.1
AagrBONN_evm.TU.Sc2ySwM_228.1486 Anthoceros agrestis HOM05D004272 ORTHO05D005020 7.3e-49 198.7 285 43.5
SGA_v2.0_scaffold483G52343 Striga asiatica HOM05D004272 ORTHO05D005020 2.1e-48 197.2 153 64.7
Cre12.g524450 Chlamydomonas reinhardtii HOM05D004272 ORTHO05D005020 3.5e-43 179.9 305 37.0
SEGI_33079 Sequoiadendron giganteum HOM05D004272 ORTHO05D005020 8.7e-42 175.3 170 52.9
CBR_g17924 Chara braunii HOM05D004272 ORTHO05D005020 2.5e-41 173.7 206 44.2
Zm00001eb138930 Zea mays HOM05D004272 ORTHO05D005020 8.4e-37 158.7 242 41.7
Potri.019G086001 Populus trichocarpa HOM05D004272 ORTHO05D005020 1.9e-36 157.5 137 59.1
CDE12G0366 Ceratophyllum demersum HOM05D004272 ORTHO05D005020 5.4e-36 156.0 246 41.5
Haze_26549 Corylus avellana HOM05D004272 ORTHO05D005020 1.8e-34 151.0 318 33.6
CBR_g49956 Chara braunii HOM05D004272 ORTHO05D005020 3.0e-34 150.2 228 40.4
Haze_26606 Corylus avellana HOM05D004272 ORTHO05D005020 2.5e-33 147.1 247 35.6
PGSC0003DMG400024543 Solanum tuberosum HOM05D004272 ORTHO05D005020 5.6e-33 146.0 160 51.9
Dinv41680 Davidia involucrata HOM05D004272 ORTHO05D005020 3.1e-31 140.2 121 66.1
TPR.G15698 Trifolium pratense HOM05D004272 ORTHO05D005020 7.6e-30 135.6 92 68.5
SMO166G0076 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 1.3e-29 134.8 301 32.2
SMO119G0089 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 9.3e-28 128.6 244 35.2
PRCOL_00003935 Prasinoderma coloniale HOM05D004272 ORTHO05D005020 2.7e-27 127.1 303 32.3
Cre09.g389949 Chlamydomonas reinhardtii HOM05D004272 ORTHO05D005020 1.8e-26 124.4 363 29.8
SMO115G0188 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 5.6e-25 119.4 296 30.4
CBR_g53619 Chara braunii HOM05D004272 ORTHO05D005020 6.9e-23 112.5 502 22.9
SGA_v2.0_scaffold1053G53812 Striga asiatica HOM05D004272 ORTHO05D005020 5.8e-22 109.4 68 72.1
SGA_v2.0_scaffold322G48619 Striga asiatica HOM05D004272 ORTHO05D005020 5.8e-22 109.4 68 72.1
SGA_v2.0_scaffold386G50488 Striga asiatica HOM05D004272 ORTHO05D005020 1.3e-21 108.2 68 70.6
Cfa026335 Carpinus fangiana HOM05D003314 ORTHO05D004164 3.8e-21 106.7 262 33.2
SEGI_21150 Sequoiadendron giganteum HOM05D004272 ORTHO05D005020 1.4e-20 104.8 94 54.3
CBR_g53623 Chara braunii HOM05D004272 ORTHO05D005020 1.9e-20 104.4 116 37.9
Cfa022797 Carpinus fangiana HOM05D004272 ORTHO05D005020 5.5e-20 102.8 291 27.5
SMO351G0156 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 1.2e-19 101.7 161 40.4
PSO170G3665 Papaver somniferum HOM05D004272 ORTHO05D005020 5.7e-17 92.8 215 33.5
Glyma.20G173900 Glycine max HOM05D004272 ORTHO05D005020 9.0e-15 85.5 60 61.7
Psat6g014560 Pisum sativum HOM05D004272 ORTHO05D005020 6.1e-11 72.8 82 51.2


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