Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2885 Fragaria x ananassa HOM05D004837 ORTHO05D005741 0.0e+00 1186.0 681 100.0
FvH4_5g12492 Fragaria vesca HOM05D004837 ORTHO05D005741 0.0e+00 1178.3 681 99.4
FAN04G0597 Fragaria x ananassa HOM05D004837 ORTHO05D005741 0.0e+00 1140.9 681 96.9
FAN08G2631 Fragaria x ananassa HOM05D004837 ORTHO05D005741 0.0e+00 1139.0 681 94.3
RcHm_v2.0_Chr7g0184861 Rosa chinensis HOM05D004837 ORTHO05D005741 0.0e+00 1138.3 681 94.1
FAN18G2415 Fragaria x ananassa HOM05D004837 ORTHO05D005741 0.0e+00 1134.4 730 89.2
MD10G1081900 Malus domestica HOM05D004837 ORTHO05D005741 0.0e+00 1078.5 680 88.7
Prupe.8G104400 Prunus persica HOM05D004837 ORTHO05D005741 1.6e-310 1068.9 680 86.2
CiPaw.15G128500 Carya illinoinensis HOM05D004837 ORTHO05D005741 1.1e-300 1036.2 677 85.1
Cfa019797 Carpinus fangiana HOM05D004837 ORTHO05D005741 2.0e-297 1025.4 680 83.5
CSS0011479 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 2.6e-297 1025.0 681 82.1
Actinidia35081 Actinidia chinensis HOM05D004837 ORTHO05D005741 7.6e-297 1023.5 681 83.7
TWI15G0076 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 1.0e-296 1023.1 680 84.1
CSS0007108 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 2.9e-296 1021.5 681 81.9
Manes.05G138800 Manihot esculenta HOM05D004837 ORTHO05D005741 1.3e-293 1012.7 682 84.2
Potri.012G061000 Populus trichocarpa HOM05D004837 ORTHO05D005741 1.9e-292 1008.8 680 81.9
Thecc.03G030500 Theobroma cacao HOM05D004837 ORTHO05D005741 9.6e-292 1006.5 680 82.9
Atru.chr9.792 Acer truncatum HOM05D004837 ORTHO05D005741 3.7e-291 1004.6 681 80.9
CANSAT80G2884 Cannabis sativa HOM05D004837 ORTHO05D005741 2.4e-290 1001.9 682 80.4
ClCG03G012520 Citrullus lanatus HOM05D004837 ORTHO05D005741 9.0e-290 1000.0 682 80.2
Gorai.006G062600 Gossypium raimondii HOM05D004837 ORTHO05D005741 7.6e-289 996.9 676 81.1
CSS0025722 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 6.5e-288 993.8 680 80.7
COL.COLO4_16258 Corchorus olitorius HOM05D004837 ORTHO05D005741 1.1e-287 993.0 680 80.6
Gohir.A09G047000 Gossypium hirsutum HOM05D004837 ORTHO05D005741 1.1e-287 993.0 676 80.8
TWI81G0923 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 1.1e-287 993.0 680 80.3
Manes.01G012900 Manihot esculenta HOM05D004837 ORTHO05D005741 1.4e-287 992.6 682 81.1
Ciclev10019149m.g Citrus clementina HOM05D004837 ORTHO05D005741 4.2e-287 991.1 680 80.0
Gohir.D09G047500 Gossypium hirsutum HOM05D004837 ORTHO05D005741 4.2e-287 991.1 676 80.8
Lj2g0006103 Lotus japonicus HOM05D004837 ORTHO05D005741 5.1e-285 984.2 680 81.6
AT3G18480 Arabidopsis thaliana HOM05D004837 ORTHO05D005741 1.9e-284 982.2 686 77.8
CsaV3_1G043510 Cucumis sativus L. HOM05D004837 ORTHO05D005741 3.3e-284 981.5 683 79.4
THA.LOC104821845 Tarenaya hassleriana HOM05D004837 ORTHO05D005741 3.3e-284 981.5 681 79.1
HanXRQChr17g0558331 Helianthus annuus HOM05D004837 ORTHO05D005741 7.4e-284 980.3 688 78.5
Aa31LG8G5290 Aethionema arabicum HOM05D004837 ORTHO05D005741 9.7e-284 979.9 689 77.6
TAR629G1790 Trochodendron aralioides HOM05D004837 ORTHO05D005741 9.7e-284 979.9 682 78.6
AL3G31770 Arabidopsis lyrata HOM05D004837 ORTHO05D005741 2.2e-283 978.8 686 77.3
PSO782G0716 Papaver somniferum HOM05D004837 ORTHO05D005741 2.2e-283 978.8 665 79.7
PSO063G6385 Papaver somniferum HOM05D004837 ORTHO05D005741 3.7e-283 978.0 665 79.4
Ca_25454_v3 Cicer arietinum L. HOM05D004837 ORTHO05D005741 6.3e-283 977.2 684 81.1
Lj5C146T15 Lonicera japonica HOM05D004837 ORTHO05D005741 1.4e-282 976.1 655 81.2
QL10p023827 Quercus lobata HOM05D004837 ORTHO05D005741 2.4e-282 975.3 677 81.8
vmacro23526 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 5.3e-282 974.2 742 73.3
GSVIVG01008258001 Vitis vinifera HOM05D004837 ORTHO05D005741 6.9e-282 973.8 668 79.8
Medtr8g103950 Medicago truncatula HOM05D004837 ORTHO05D005741 1.2e-281 973.0 682 78.9
vmacro16451 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 1.2e-281 973.0 742 73.3
arahy.Tifrunner.gnm1.ann1.SIGA6A Arachis hypogaea HOM05D004837 ORTHO05D005741 3.4e-281 971.5 680 79.1
Carub.0003s1824 Capsella rubella HOM05D004837 ORTHO05D005741 4.5e-281 971.1 688 78.9
Lalb_Chr24g0397611 Lupinus albus HOM05D004837 ORTHO05D005741 5.9e-281 970.7 678 82.0
Thhalv10020192m.g Eutrema salsugineum HOM05D004837 ORTHO05D005741 1.0e-280 969.9 688 76.9
ECA233G3214 Erigeron canadensis HOM05D004837 ORTHO05D005741 3.8e-280 968.0 668 78.6
CARHR093830 Cardamine hirsuta HOM05D004837 ORTHO05D005741 1.4e-279 966.1 690 78.3
Sed0018155 Sechium edule HOM05D004837 ORTHO05D005741 2.5e-279 965.3 683 78.0
Glyma.07G089600 Glycine max HOM05D004837 ORTHO05D005741 5.5e-279 964.1 677 79.0
BolC5t33444H Brassica oleracea HOM05D004837 ORTHO05D005741 9.4e-279 963.4 688 76.6
Lalb_Chr22g0352981 Lupinus albus HOM05D004837 ORTHO05D005741 1.2e-278 963.0 678 79.1
Lsat_1_v5_gn_8_147101 Lactuca sativa HOM05D004837 ORTHO05D005741 4.6e-278 961.1 682 76.8
Solyc06g069210.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 1.0e-277 959.9 681 77.4
Sopen06g026470 Solanum pennellii HOM05D004837 ORTHO05D005741 1.4e-277 959.5 681 79.6
Rhsim12G0143900 Rhododendron simsii HOM05D004837 ORTHO05D005741 1.8e-277 959.1 653 80.1
Aqoxy3G03933 Aquilegia oxysepala HOM05D004837 ORTHO05D005741 3.0e-277 958.4 658 79.6
Glyma.09G187100 Glycine max HOM05D004837 ORTHO05D005741 5.1e-277 957.6 677 78.3
BolC1t04537H Brassica oleracea HOM05D004837 ORTHO05D005741 2.5e-276 955.3 686 78.0
Cpa.g.sc13.20 Carica papaya HOM05D004837 ORTHO05D005741 5.7e-276 954.1 683 78.9
DCAR_004539 Daucus carota HOM05D004837 ORTHO05D005741 5.7e-276 954.1 679 78.8
Duzib084G1378 Durio zibethinus HOM05D004837 ORTHO05D005741 1.7e-275 952.6 680 77.8
Nn4g23774 Nelumbo nucifera HOM05D004837 ORTHO05D005741 2.6e-273 945.3 682 76.1
Sp3g16570 Schrenkiella parvula HOM05D004837 ORTHO05D005741 1.3e-272 943.0 687 77.3
Eucgr.B00707 Eucalyptus grandis HOM05D004837 ORTHO05D005741 2.9e-272 941.8 679 77.8
C05p47190 Brassica napus HOM05D004837 ORTHO05D005741 6.5e-272 940.6 688 75.3
BcaB04g20769 Brassica carinata HOM05D004837 ORTHO05D005741 8.5e-272 940.3 682 77.9
BcaC05g28614 Brassica carinata HOM05D004837 ORTHO05D005741 1.9e-271 939.1 688 75.1
C01p45740 Brassica napus HOM05D004837 ORTHO05D005741 4.2e-271 937.9 686 77.1
Phvul.004G160100 Phaseolus vulgaris HOM05D004837 ORTHO05D005741 7.2e-271 937.2 682 78.2
Lj4g0025474 Lotus japonicus HOM05D004837 ORTHO05D005741 1.2e-270 936.4 678 77.4
BcaC09g48805 Brassica carinata HOM05D004837 ORTHO05D005741 1.6e-270 936.0 686 77.0
BcaB06g25891 Brassica carinata HOM05D004837 ORTHO05D005741 3.0e-269 931.8 686 76.8
arahy.Tifrunner.gnm1.ann1.7R0LHH Arachis hypogaea HOM05D004837 ORTHO05D005741 3.9e-269 931.4 726 72.5
TPR.G21711 Trifolium pratense HOM05D004837 ORTHO05D005741 2.6e-268 928.7 660 77.9
arahy.Tifrunner.gnm1.ann1.71FAZ0 Arachis hypogaea HOM05D004837 ORTHO05D005741 3.7e-267 924.9 726 72.0
A01p35930 Brassica napus HOM05D004837 ORTHO05D005741 1.4e-266 922.9 685 76.4
Sabra12G0044300 Salix brachista HOM05D004837 ORTHO05D005741 1.8e-266 922.5 688 79.5
Peaxi162Scf00013g00943 Petunia axillaris HOM05D004837 ORTHO05D005741 6.5e-264 914.1 655 79.2
A05p31170 Brassica napus HOM05D004837 ORTHO05D005741 4.2e-263 911.4 687 75.4
BraA05t21958Z Brassica rapa HOM05D004837 ORTHO05D005741 4.2e-263 911.4 687 75.4
BraA01t03672Z Brassica rapa HOM05D004837 ORTHO05D005741 1.0e-261 906.7 716 73.0
MBI13_g10043_MAGBIO Magnolia biondii HOM05D004837 ORTHO05D005741 4.0e-261 904.8 679 74.4
Haze_18623 Corylus avellana HOM05D004837 ORTHO05D005741 8.2e-259 897.1 1030 55.7
PGR083G0937 Punica granatum HOM05D004837 ORTHO05D005741 8.2e-259 897.1 680 73.7
SGA_v2.0_scaffold10G05151 Striga asiatica HOM05D004837 ORTHO05D005741 1.3e-256 889.8 682 73.5
Migut.M00003 Erythranthe guttata HOM05D004837 ORTHO05D005741 2.2e-256 889.0 682 73.0
Cc04_g07300 Coffea canephora HOM05D004837 ORTHO05D005741 8.5e-256 887.1 681 73.0
MSTRG.14939 Avicennia marina HOM05D004837 ORTHO05D005741 3.2e-255 885.2 679 72.6
Sc10g0009510 Simmondsia chinensis HOM05D004837 ORTHO05D005741 4.2e-255 884.8 631 78.9
unitig_37.g12022 Utricularia gibba HOM05D004837 ORTHO05D005741 1.0e-253 880.2 677 70.9
Nitab4.5_0010565g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 3.4e-252 875.2 729 69.4
VMungo0464G1696 Vigna mungo HOM05D004837 ORTHO05D005741 4.4e-252 874.8 682 75.7
EL10Ac5g11426 Beta vulgaris HOM05D004837 ORTHO05D005741 5.4e-250 867.8 681 74.3
Nitab4.5_0001432g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 7.0e-250 867.5 713 71.8
Ah.02g115350 Amaranthus hybridus HOM05D004837 ORTHO05D005741 6.5e-248 860.9 679 71.4
Dinv40420 Davidia involucrata HOM05D004837 ORTHO05D005741 6.8e-245 850.9 568 82.4
AUR62029852 Chenopodium quinoa HOM05D004837 ORTHO05D005741 1.2e-244 850.1 679 71.4
arahy.Tifrunner.gnm1.ann1.9R3N8Z Arachis hypogaea HOM05D004837 ORTHO05D005741 2.6e-244 849.0 680 72.1
AUR62025880 Chenopodium quinoa HOM05D004837 ORTHO05D005741 4.4e-244 848.2 679 71.3
Hund02403 Selenicereus undatus HOM05D004837 ORTHO05D005741 8.0e-238 827.4 618 74.9
Nitab4.5_0008699g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.4e-237 826.6 734 67.3
CDE11G0344 Ceratophyllum demersum HOM05D004837 ORTHO05D005741 2.0e-236 822.8 647 71.4
Nitab4.5_0001599g0070 Nicotiana tabacum HOM05D004837 ORTHO05D005741 4.4e-236 821.6 719 67.2
Os03g0710900 Oryza sativa ssp. japonica HOM05D004837 ORTHO05D005741 4.4e-236 821.6 670 68.7
Zm00001eb216420 Zea mays HOM05D004837 ORTHO05D005741 5.7e-236 821.2 695 69.1
ATR0021G039 Amborella trichopoda HOM05D004837 ORTHO05D005741 2.4e-226 789.3 685 65.7
HPP92_013262 Vanilla planifolia HOM05D004837 ORTHO05D005741 2.7e-225 785.8 665 66.0
SEGI_01686 Sequoiadendron giganteum HOM05D004837 ORTHO05D005741 6.0e-225 784.6 656 67.5
Mapoly0091s0053 Marchantia polymorpha HOM05D004837 ORTHO05D005741 6.6e-208 728.0 667 63.0
Oeu016160.3 Olea europaea HOM05D004837 ORTHO05D005741 1.1e-207 727.2 703 64.3
Pp3c3_5600 Physcomitrium patens HOM05D004837 ORTHO05D005741 5.4e-202 708.4 668 60.8
SMO147G0276 Selaginella moellendorffii HOM05D004837 ORTHO05D005741 3.5e-201 705.7 665 60.0
Psat7g012560 Pisum sativum HOM05D004837 ORTHO05D005741 2.3e-200 703.0 545 73.8
Pp3c25_10040 Physcomitrium patens HOM05D004837 ORTHO05D005741 4.2e-194 682.2 682 57.6
PGSC0003DMG400004053 Solanum tuberosum HOM05D004837 ORTHO05D005741 4.5e-164 582.4 419 81.4
MELO3C015107.2 Cucumis melo HOM05D004837 ORTHO05D005741 2.0e-156 557.0 397 79.1
CBR_g38539 Chara braunii HOM05D004837 ORTHO05D005741 2.4e-149 533.5 680 47.8
Actinidia31023 Actinidia chinensis HOM05D004837 ORTHO05D005741 1.2e-145 521.2 368 75.8
AagrBONN_evm.TU.Sc2ySwM_228.1000 Anthoceros agrestis HOM05D004837 ORTHO05D005741 1.0e-120 438.3 569 49.4
HPP92_013216 Vanilla planifolia HOM05D004837 ORTHO05D005741 8.9e-120 435.3 342 65.8
CAN.G423.1 Capsicum annuum HOM05D004837 ORTHO05D005741 1.2e-100 371.7 368 63.6
Atru.chr9.1054 Acer truncatum HOM05D004837 ORTHO05D005741 8.4e-86 322.4 497 46.5
Atru.chr9.1055 Acer truncatum HOM05D004837 ORTHO05D005741 2.3e-83 314.3 506 46.0
HPP92_013215 Vanilla planifolia HOM05D004837 ORTHO05D005741 1.3e-75 288.5 269 64.3
Cre08.g382650 Chlamydomonas reinhardtii HOM05D004837 ORTHO05D005741 1.1e-72 278.9 708 31.1
Prupe.8G103800 Prunus persica HOM05D004837 ORTHO05D005741 2.3e-59 234.6 770 33.0
MELO3C029547.2 Cucumis melo HOM05D004837 ORTHO05D005741 8.7e-51 206.1 185 65.4
Gohir.D12G266250 Gossypium hirsutum HOM05D004837 ORTHO05D005741 7.7e-47 193.0 147 74.1
CAN.G587.83 Capsicum annuum HOM05D004837 ORTHO05D005741 5.0e-46 190.3 112 85.7
Gorai.008G286000 Gossypium raimondii HOM05D004837 ORTHO05D005741 1.9e-45 188.3 556 32.2
SHI30382 Sapria himalayana HOM05D004837 ORTHO05D005741 1.6e-44 185.3 120 81.7
Nitab4.5_0010701g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 2.5e-37 161.4 93 88.2
PRCOL_00005675 Prasinoderma coloniale HOM05D004837 ORTHO05D005741 2.1e-28 131.7 604 27.2
Ah.11g042150 Amaranthus hybridus HOM05D004837 ORTHO05D005741 1.8e-27 128.6 93 77.4
Cfa021462 Carpinus fangiana HOM05D004837 ORTHO05D005741 1.1e-21 109.4 677 23.5
Solyc03g119670.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 2.0e-18 98.6 71 74.6
BcaC07g39700 Brassica carinata HOM05D004837 ORTHO05D026816 3.8e-14 84.3 97 56.7
BolC8t50465H Brassica oleracea HOM05D004837 ORTHO05D005741 2.1e-12 78.6 82 59.8
Psat7g009760 Pisum sativum HOM05D004837 ORTHO05D005741 9.8e-10 69.7 43 74.4
DCAR_013034 Daucus carota HOM05D004837 ORTHO05D005741 3.7e-09 67.8 54 66.7
Actinidia31022 Actinidia chinensis HOM05D004837 ORTHO05D005741 4.9e-09 67.4 195 35.4
C08p28590 Brassica napus HOM05D004837 ORTHO05D005741 8.3e-09 66.6 82 56.1
MCO10G228 Micromonas commoda HOM05D004837 ORTHO05D005741 1.1e-08 66.2 690 21.6


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