Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 5.3e-142 507.7 255 100.0
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 4.2e-139 498.0 255 98.4
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 1.3e-135 486.5 255 96.1
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.6e-133 478.8 255 95.7
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 4.0e-126 454.9 255 89.8
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 2.1e-90 336.3 252 69.4
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 7.5e-88 327.8 257 66.5
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 7.7e-85 317.8 243 68.3
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 4.7e-82 308.5 235 68.5
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 4.7e-82 308.5 235 68.5
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 3.3e-75 285.8 240 65.0
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 5.5e-75 285.0 242 61.6
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 7.2e-75 284.6 245 61.6
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 3.6e-74 282.3 241 63.1
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 5.2e-73 278.5 240 63.3
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 4.4e-72 275.4 240 60.0
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 7.5e-72 274.6 244 61.9
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 7.5e-72 274.6 253 58.1
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 7.5e-72 274.6 250 59.2
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 9.8e-72 274.2 240 60.0
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 2.8e-71 272.7 237 60.8
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 3.7e-71 272.3 237 60.8
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 4.9e-71 271.9 236 61.0
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 4.9e-71 271.9 253 59.7
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 8.3e-71 271.2 240 59.6
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 8.3e-71 271.2 235 61.7
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 1.1e-70 270.8 239 61.1
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 1.8e-70 270.0 242 59.1
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.8e-70 270.0 235 60.9
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 1.8e-70 270.0 251 59.8
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 5.4e-70 268.5 243 60.9
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 5.4e-70 268.5 243 60.9
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 5.4e-70 268.5 233 61.4
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 7.0e-70 268.1 237 60.8
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.2e-69 267.3 235 60.0
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 1.2e-69 267.3 233 60.9
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 1.2e-69 267.3 246 59.3
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 1.6e-69 266.9 242 58.7
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 2.0e-69 266.5 250 59.6
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 2.7e-69 266.2 246 59.8
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 3.5e-69 265.8 237 61.2
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 1.0e-68 264.2 246 59.8
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 1.0e-68 264.2 236 59.7
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.9e-68 262.7 232 60.3
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 2.9e-68 262.7 251 58.2
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 3.9e-68 262.3 242 61.6
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 5.0e-68 261.9 243 59.3
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 6.6e-68 261.5 251 58.6
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 6.6e-68 261.5 230 61.3
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 8.6e-68 261.2 236 59.3
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 8.6e-68 261.2 245 58.0
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.5e-67 260.4 251 57.8
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 3.3e-67 259.2 251 57.4
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 4.3e-67 258.8 242 57.4
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 9.5e-67 257.7 236 57.6
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 9.5e-67 257.7 236 58.1
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 1.2e-66 257.3 236 58.5
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 1.6e-66 256.9 247 57.1
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 2.1e-66 256.5 230 61.7
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 2.8e-66 256.1 236 58.1
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 2.8e-66 256.1 236 58.1
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 2.8e-66 256.1 237 57.0
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 3.6e-66 255.8 236 57.2
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.6e-66 255.8 239 59.0
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 4.7e-66 255.4 236 57.6
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 8.0e-66 254.6 236 57.2
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 8.0e-66 254.6 275 52.4
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.0e-65 254.2 236 57.6
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.4e-65 253.8 236 57.2
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 1.4e-65 253.8 236 57.2
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 1.4e-65 253.8 249 56.2
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 1.8e-65 253.4 236 57.6
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 1.8e-65 253.4 236 56.8
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 1.8e-65 253.4 236 56.8
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 1.8e-65 253.4 219 61.6
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 3.1e-65 252.7 236 56.8
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 4.0e-65 252.3 236 56.8
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 4.0e-65 252.3 236 56.8
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 8.9e-65 251.1 244 57.8
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 1.2e-64 250.8 235 58.7
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 1.2e-64 250.8 234 59.0
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 3.4e-64 249.2 233 58.4
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 4.4e-64 248.8 236 57.2
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 5.8e-64 248.4 233 58.4
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 9.8e-64 247.7 235 57.4
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 6.4e-63 245.0 233 56.7
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 6.4e-63 245.0 246 57.7
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 8.3e-63 244.6 249 56.6
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 1.4e-62 243.8 249 56.2
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 2.4e-62 243.0 245 53.5
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 5.4e-62 241.9 257 54.1
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 7.0e-62 241.5 238 55.9
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 9.2e-62 241.1 245 55.9
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 1.2e-61 240.7 234 55.6
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 1.6e-61 240.4 254 52.4
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 2.7e-61 239.6 243 53.1
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 4.6e-61 238.8 245 55.9
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 2.3e-60 236.5 233 56.7
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 4.3e-59 232.3 252 54.0
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 1.6e-58 230.3 196 60.2
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 3.1e-57 226.1 182 64.8
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.4e-54 217.2 244 52.9
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 7.1e-54 214.9 246 52.8
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 1.2e-53 214.2 180 63.3
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 1.7e-52 210.3 233 48.5
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 8.6e-52 208.0 234 49.1
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 1.6e-50 203.8 308 44.5
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 1.1e-49 201.1 191 57.1
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 4.4e-48 195.7 233 48.1
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 1.1e-46 191.0 213 53.5
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 3.2e-46 189.5 240 45.8
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 7.3e-43 178.3 258 44.6
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 9.6e-43 177.9 195 52.8
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 2.4e-41 173.3 155 57.4
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 4.9e-39 165.6 218 44.0
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 4.2e-38 162.5 183 50.8
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 2.1e-37 160.2 137 59.9
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 6.2e-34 148.7 226 37.6
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 2.4e-33 146.7 140 60.0
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 7.1e-30 135.2 139 55.4
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 2.8e-26 123.2 133 52.6
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 4.0e-25 119.4 228 34.2
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 2.3e-20 103.6 222 31.5
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.3e-18 97.8 82 62.2
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 4.0e-17 92.8 121 44.6
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 5.3e-17 92.4 79 55.7
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 2.0e-16 90.5 78 59.0
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.1e-14 84.7 72 59.7
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 1.9e-11 73.9 88 46.6
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.9e-11 73.9 67 65.7
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 1.4e-06 57.8 47 57.4
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 3.2e-06 56.6 46 56.5


User provided reference genes

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