Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 7.9e-200 700.3 363 100.0
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 5.6e-198 694.1 363 99.2
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.7e-194 682.6 363 97.5
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 7.4e-190 667.2 363 95.3
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 9.7e-182 640.2 372 91.4
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 2.9e-170 602.1 358 86.3
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 1.0e-143 513.8 362 72.9
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 6.1e-136 488.0 362 68.2
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 2.1e-115 419.9 326 64.7
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 5.8e-110 401.7 321 64.2
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 2.2e-109 399.8 371 59.8
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 3.8e-109 399.1 359 60.4
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 8.4e-109 397.9 365 60.0
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 9.2e-108 394.4 311 64.6
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 3.1e-103 379.4 364 58.5
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 3.8e-101 372.5 359 56.8
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.9e-100 370.2 359 55.7
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.2e-99 367.5 363 54.8
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.5e-99 365.9 331 58.6
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 6.0e-99 365.2 364 53.6
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 6.0e-99 365.2 362 54.1
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 1.0e-98 364.4 331 58.3
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.3e-98 364.0 368 54.6
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 2.3e-98 363.2 357 55.7
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 1.5e-97 360.5 359 59.6
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 2.5e-97 359.8 370 53.2
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.3e-97 359.4 331 57.4
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 7.3e-97 358.2 380 53.2
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 4.9e-93 345.5 359 51.8
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 1.9e-92 343.6 365 55.1
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 4.2e-92 342.4 359 52.1
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 7.1e-92 341.7 361 51.0
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 2.1e-91 340.1 362 51.9
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 2.7e-91 339.7 362 53.9
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 2.5e-89 333.2 359 51.5
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 1.6e-88 330.5 370 51.1
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 6.2e-88 328.6 339 54.3
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 2.4e-87 326.6 361 51.0
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 9.9e-86 321.2 368 51.4
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 1.9e-84 317.0 368 49.2
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 2.4e-84 316.6 362 51.1
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 2.4e-84 316.6 380 49.7
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 3.5e-83 312.8 351 50.4
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 4.6e-83 312.4 379 48.5
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 3.0e-82 309.7 369 50.7
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 1.1e-81 307.8 359 47.4
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 1.1e-81 307.8 359 47.6
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 1.2e-78 297.7 359 46.2
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 1.7e-77 293.9 264 59.1
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 1.9e-76 290.4 350 49.4
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 3.2e-76 289.7 362 47.0
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 9.3e-76 288.1 273 57.1
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 1.8e-74 283.9 318 51.3
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 3.0e-74 283.1 341 49.9
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 3.9e-74 282.7 363 45.7
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 7.4e-73 278.5 360 44.2
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 1.3e-72 277.7 349 47.0
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 1.6e-72 277.3 350 48.0
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 2.2e-72 276.9 271 60.1
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 2.2e-72 276.9 321 49.8
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 2.8e-72 276.6 272 60.3
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 8.2e-72 275.0 315 49.2
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 3.4e-70 269.6 337 47.8
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 2.9e-69 266.5 355 44.5
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 1.4e-68 264.2 311 51.1
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 7.2e-68 261.9 309 49.5
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 2.1e-67 260.4 350 48.0
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 2.3e-66 256.9 350 47.4
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 3.9e-66 256.1 332 46.7
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 3.9e-66 256.1 337 45.1
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 4.3e-65 252.7 324 45.1
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 4.8e-64 249.2 365 43.6
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 5.3e-63 245.7 303 48.5
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.0e-62 243.8 344 45.1
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.0e-62 243.8 344 45.1
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 4.2e-60 236.1 283 49.8
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 3.9e-58 229.6 212 59.4
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 1.1e-57 228.0 364 42.9
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.0e-57 227.3 254 51.6
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 6.5e-53 212.2 217 55.3
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 2.1e-51 207.2 232 49.6
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 8.0e-51 205.3 263 43.7
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 7.4e-49 198.7 368 36.1
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 3.1e-47 193.4 382 35.9
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 3.5e-46 189.9 366 33.9
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 2.9e-45 186.8 296 41.6
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 3.2e-44 183.3 367 35.1
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 1.6e-43 181.0 357 35.3
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 6.1e-43 179.1 343 36.7
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 1.4e-42 177.9 171 58.5
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 5.2e-42 176.0 364 34.6
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 2.2e-40 170.6 358 34.6
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 2.2e-40 170.6 358 34.6
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 3.7e-40 169.9 364 33.5
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 1.1e-39 168.3 349 34.1
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 1.1e-39 168.3 364 33.5
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 2.4e-39 167.2 360 33.3
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 3.1e-39 166.8 339 34.8
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.2e-38 164.9 339 34.5
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 3.5e-38 163.3 350 32.0
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 3.8e-37 159.8 138 58.7
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.3e-34 150.6 239 41.4
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 5.2e-34 149.4 309 34.6
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 9.5e-28 128.6 130 50.8
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 1.2e-27 128.3 291 31.6
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 1.6e-27 127.9 294 32.3
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 3.7e-24 116.7 347 28.8
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 7.8e-22 109.0 290 30.3
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 8.6e-21 105.5 293 29.0
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.9e-20 104.4 340 27.1
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 5.6e-20 102.8 333 29.1
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 4.7e-19 99.8 280 30.4
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 9.8e-17 92.0 117 46.2
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 9.8e-17 92.0 117 46.2
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 3.0e-13 80.5 80 52.5
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 1.2e-11 75.1 65 56.9
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 3.6e-11 73.6 129 38.8


User provided reference genes

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