Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2689 Fragaria x ananassa HOM05D000135 ORTHO05D019196 1.1e-27 126.3 87 100.0
FAN17G0474 Fragaria x ananassa HOM05D000135 ORTHO05D019196 1.6e-26 122.5 86 98.8
FAN17G0535 Fragaria x ananassa HOM05D000135 ORTHO05D019196 2.1e-26 122.1 86 97.7
FAN13G2165 Fragaria x ananassa HOM05D000135 ORTHO05D019196 3.6e-26 121.3 86 97.7
FAN16G3744 Fragaria x ananassa HOM05D000135 ORTHO05D019196 6.2e-26 120.6 85 98.8
FAN26G0799 Fragaria x ananassa HOM05D000135 ORTHO05D019196 3.1e-25 118.2 85 96.5
FAN06G1102 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.3e-23 112.8 86 93.0
FAN12G2999 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.3e-23 112.8 85 94.1
FAN21G1664 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.3e-23 112.8 85 94.1
FAN24G3438 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.9e-23 111.7 85 92.9
FAN23G1951 Fragaria x ananassa HOM05D000135 ORTHO05D000203 4.9e-23 110.9 84 94.0
FAN24G3071 Fragaria x ananassa HOM05D000135 ORTHO05D000203 4.9e-23 110.9 84 94.0
FAN20G2801 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.8e-16 87.4 71 94.4
FAN05G1619 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.1e-14 83.2 71 93.0
FAN11G1946 Fragaria x ananassa HOM05D015405 ORTHO05D000203 1.1e-14 83.2 71 93.0
FAN11G2972 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.1e-14 83.2 71 93.0
FAN18G1822 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.1e-14 83.2 71 93.0
FAN25G2085 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.1e-14 83.2 71 93.0
FAN07G0831 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.2e-14 81.6 71 91.5
FAN27G1943 Fragaria x ananassa HOM05D000135 ORTHO05D000203 9.2e-14 80.1 71 90.1
FAN05G2151 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.2e-13 79.7 71 85.9
FAN08G3664 Fragaria x ananassa HOM05D002325 ORTHO05D000336 2.7e-13 78.6 51 98.0
FAN01G0394 Fragaria x ananassa HOM05D004645 ORTHO05D005693 5.1e-12 74.3 53 90.6
FAN13G0473 Fragaria x ananassa HOM05D000135 ORTHO05D000203 5.1e-12 74.3 53 90.6
FAN27G2783 Fragaria x ananassa HOM05D000135 ORTHO05D019196 1.5e-11 72.8 35 97.1
FAN28G1087 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.1e-10 68.9 34 91.2
FAN03G1486 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.4e-09 65.5 34 88.2
FAN16G3292 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.4e-09 65.5 34 88.2
FAN28G2192 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.4e-09 65.5 34 88.2
FvH4_4g10830 Fragaria vesca HOM05D000135 ORTHO05D000203 9.0e-09 63.5 34 85.3
FAN07G1946 Fragaria x ananassa HOM05D000135 ORTHO05D000203 9.0e-09 63.5 34 85.3
FAN17G0225 Fragaria x ananassa HOM05D000135 ORTHO05D000203 9.0e-09 63.5 34 85.3
FAN07G2731 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.2e-08 63.2 34 85.3
FAN12G3856 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.2e-08 63.2 34 82.4
RcHm_v2.0_Chr4g0406651 Rosa chinensis HOM05D000135 ORTHO05D000203 1.2e-08 63.2 34 85.3
FAN20G1347 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.5e-08 62.8 34 85.3
MD13G1272800 Malus domestica HOM05D000135 ORTHO05D000203 2.6e-08 62.0 34 82.4
MD04G1041400 Malus domestica HOM05D000135 ORTHO05D000203 4.4e-08 61.2 34 82.4
Prupe.1G194800 Prunus persica HOM05D000135 ORTHO05D000203 4.4e-08 61.2 34 82.4
Duzib151G1013 Durio zibethinus HOM05D000135 ORTHO05D000203 2.9e-07 58.5 34 76.5
FAN08G0585 Fragaria x ananassa HOM05D000135 ORTHO05D000203 4.9e-07 57.8 34 79.4
COL.COLO4_07674 Corchorus olitorius HOM05D000135 ORTHO05D000203 1.1e-06 56.6 34 76.5
QL10p049466 Quercus lobata HOM05D000135 ORTHO05D000203 1.4e-06 56.2 34 76.5
Ca_20790_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 3.2e-06 55.1 34 73.5
Medtr4g067270 Medicago truncatula HOM05D000135 ORTHO05D000203 3.2e-06 55.1 34 73.5
Psat7g209840 Pisum sativum HOM05D000135 ORTHO05D000203 3.2e-06 55.1 34 73.5
Potri.007G128600 Populus trichocarpa HOM05D000135 ORTHO05D000203 3.2e-06 55.1 34 73.5
Thecc.04G179100 Theobroma cacao HOM05D000135 ORTHO05D000203 3.2e-06 55.1 34 73.5
TPR.G34210 Trifolium pratense HOM05D000135 ORTHO05D000203 3.2e-06 55.1 34 73.5
CSS0038594 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 4.2e-06 54.7 34 73.5
CSS0046428 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 4.2e-06 54.7 34 73.5
ClCG07G015690 Citrullus lanatus HOM05D000135 ORTHO05D000203 4.2e-06 54.7 34 73.5
MELO3C017712.2 Cucumis melo HOM05D000135 ORTHO05D000203 4.2e-06 54.7 34 73.5
CsaV3_4G003420 Cucumis sativus L. HOM05D000135 ORTHO05D000203 4.2e-06 54.7 34 73.5
Dinv44187 Davidia involucrata HOM05D000135 ORTHO05D000203 4.2e-06 54.7 34 73.5
Lj3g0028251 Lotus japonicus HOM05D000135 ORTHO05D000203 4.2e-06 54.7 34 73.5
MBI11_g23340_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000203 4.2e-06 54.7 34 73.5
Hma1.2p1_0847F.1_g227905 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 5.4e-06 54.3 34 73.5
Sabra07G0105100 Salix brachista HOM05D000135 ORTHO05D000203 5.4e-06 54.3 35 68.6
Cfa015171 Carpinus fangiana HOM05D000135 ORTHO05D000203 7.1e-06 53.9 34 70.6
CiPaw.01G099700 Carya illinoinensis HOM05D000135 ORTHO05D000203 7.1e-06 53.9 35 68.6
Haze_01502 Corylus avellana HOM05D000135 ORTHO05D000203 7.1e-06 53.9 34 70.6
Nitab4.5_0002084g0060 Nicotiana tabacum HOM05D000135 ORTHO05D000203 7.1e-06 53.9 34 70.6
Nitab4.5_0006914g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 7.1e-06 53.9 34 70.6
Peaxi162Scf00413g00063 Petunia axillaris HOM05D000135 ORTHO05D000203 7.1e-06 53.9 34 70.6
ECA240G3776 Erigeron canadensis HOM05D004190 ORTHO05D000203 9.3e-06 53.5 34 64.7
Rhsim09G0029100 Rhododendron simsii HOM05D000135 ORTHO05D000203 9.3e-06 53.5 34 73.5
Sopen06g029610 Solanum pennellii HOM05D000135 ORTHO05D000203 9.3e-06 53.5 34 70.6
PGSC0003DMG400026914 Solanum tuberosum HOM05D000135 ORTHO05D000203 9.3e-06 53.5 34 70.6
TAR633G0712 Trochodendron aralioides HOM05D000135 ORTHO05D000203 9.3e-06 53.5 35 65.7


User provided reference genes

Program Settings