Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.6e-175 618.6 310 100.0
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 2.2e-174 615.5 309 99.7
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.6e-171 604.0 309 97.7
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 9.5e-170 600.1 309 96.8
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.7e-169 597.8 344 89.5
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 8.3e-166 587.0 326 92.0
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 1.7e-163 579.3 305 95.1
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 6.6e-163 577.4 309 95.1
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 1.9e-149 532.7 304 83.9
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.7e-140 502.3 277 93.5
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.0e-139 500.4 304 78.9
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 5.1e-139 498.0 303 78.5
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 5.1e-139 498.0 304 78.6
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 6.6e-139 497.7 304 78.6
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 5.6e-138 494.6 304 78.9
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 7.3e-138 494.2 304 78.3
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 2.1e-137 492.7 301 82.1
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 2.8e-137 492.3 303 78.2
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 4.7e-137 491.5 303 79.5
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 1.8e-136 489.6 302 77.2
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 4.0e-136 488.4 297 79.5
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 6.9e-136 487.6 297 79.5
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 6.9e-136 487.6 306 78.1
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 1.5e-135 486.5 297 78.8
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 5.8e-135 484.6 305 77.7
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 8.4e-134 480.7 304 76.3
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 4.2e-133 478.4 298 76.5
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 3.0e-131 472.2 305 74.1
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 6.6e-131 471.1 298 75.5
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 1.9e-130 469.5 305 74.4
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 1.9e-130 469.5 303 74.9
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 3.3e-130 468.8 298 74.8
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 7.3e-130 467.6 305 73.8
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 9.6e-130 467.2 304 75.0
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 2.8e-129 465.7 299 73.9
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 2.8e-129 465.7 305 73.1
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 4.0e-128 461.8 303 73.9
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.2e-127 460.3 305 71.5
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 1.5e-127 459.9 301 72.8
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 1.5e-127 459.9 301 72.8
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 2.0e-127 459.5 306 72.9
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 5.8e-127 458.0 306 72.5
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 9.9e-127 457.2 304 72.4
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 3.8e-126 455.3 298 71.8
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 4.9e-126 454.9 307 70.7
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 1.1e-125 453.8 304 71.4
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 1.4e-125 453.4 307 70.7
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 1.4e-125 453.4 307 70.7
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 2.4e-125 452.6 304 71.1
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 2.4e-125 452.6 307 70.4
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 2.4e-125 452.6 304 73.7
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 2.4e-125 452.6 319 70.2
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 7.1e-125 451.1 304 71.1
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 9.3e-125 450.7 306 70.6
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.1e-124 449.5 307 70.0
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 4.6e-124 448.4 303 71.0
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 1.3e-123 446.8 366 62.8
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.8e-123 446.4 304 70.1
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 3.9e-123 445.3 304 74.0
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 6.7e-123 444.5 298 72.8
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 2.5e-122 442.6 302 70.9
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 7.4e-122 441.0 302 72.5
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 1.3e-121 440.3 306 69.6
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 3.7e-121 438.7 303 69.6
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 4.8e-121 438.3 307 71.3
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 4.8e-121 438.3 307 71.3
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 6.2e-121 438.0 299 69.9
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 8.1e-121 437.6 307 71.3
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 1.4e-120 436.8 303 70.3
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 6.9e-120 434.5 303 70.3
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 2.6e-119 432.6 303 70.3
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 5.8e-119 431.4 299 68.6
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 4.9e-118 428.3 298 68.5
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 2.1e-116 422.9 303 68.0
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 3.9e-115 418.7 273 74.0
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 1.5e-114 416.8 272 73.2
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 1.9e-114 416.4 323 64.7
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.6e-114 414.8 309 74.8
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 5.6e-114 414.8 299 66.9
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 9.6e-114 414.1 299 66.2
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 4.8e-113 411.8 276 73.2
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 1.8e-112 409.8 307 65.1
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 4.0e-112 408.7 294 69.0
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 5.8e-111 404.8 272 71.3
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 4.2e-109 398.7 303 66.3
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 6.7e-107 391.3 303 63.7
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 6.7e-107 391.3 309 65.4
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 8.7e-107 391.0 301 63.1
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 5.7e-106 388.3 304 63.2
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 9.7e-106 387.5 304 61.2
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 2.8e-105 386.0 297 64.0
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 1.9e-101 373.2 277 65.0
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 2.1e-100 369.8 328 60.7
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 2.8e-97 359.4 304 56.9
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 3.7e-97 359.0 271 64.9
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.4e-96 356.3 265 65.7
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 4.7e-92 342.0 225 72.0
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 1.8e-91 340.1 271 62.7
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 2.8e-89 332.8 447 46.3
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 5.9e-87 325.1 293 53.9
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.1e-85 320.9 267 62.2
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.0e-78 297.7 280 52.5
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 1.5e-77 293.9 305 48.2
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 2.7e-71 273.1 314 43.0
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 2.2e-70 270.0 171 77.8
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 2.9e-70 269.6 298 45.0
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 2.8e-65 253.1 172 69.8
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 6.5e-62 241.9 151 75.5
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.7e-57 227.3 197 57.4
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 4.0e-51 206.1 149 65.8
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 1.4e-48 197.6 165 60.6
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 1.1e-43 181.4 129 64.3
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 4.0e-43 179.5 170 55.3
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 5.2e-43 179.1 127 66.1
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 6.8e-43 178.7 129 65.1
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 2.7e-39 166.8 170 50.6
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 7.8e-39 165.2 170 51.2
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 1.6e-36 157.5 112 67.9
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 3.7e-33 146.4 189 42.9
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 3.3e-29 133.3 196 36.2
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 4.0e-27 126.3 109 61.5
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 1.5e-26 124.4 126 52.4
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 7.3e-21 105.5 198 31.8
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 3.1e-11 73.6 45 71.1
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 3.1e-11 73.6 45 71.1
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 7.6e-10 68.9 99 43.4
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 4.9e-09 66.2 31 83.9
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 2.3e-06 57.4 206 25.7
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 3.0e-06 57.0 149 30.2
SEGI_36463 Sequoiadendron giganteum HOM05D002058 ORTHO05D009216 3.0e-06 57.0 128 33.6


User provided reference genes

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