Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2618 Fragaria x ananassa HOM05D017100 ORTHO05D008036 1.0e-95 353.6 205 100.0
FAN13G1599 Fragaria x ananassa HOM05D017100 ORTHO05D008036 6.3e-45 184.9 107 100.0
FvH4_5g04090 Fragaria vesca HOM05D017100 ORTHO05D008036 4.4e-38 162.2 89 92.1
FAN18G0435 Fragaria x ananassa HOM05D017100 ORTHO05D008036 6.3e-37 158.3 86 95.3
FAN04G1004 Fragaria x ananassa HOM05D017100 ORTHO05D008036 2.2e-34 149.8 79 94.9
FAN04G2843 Fragaria x ananassa HOM05D017100 ORTHO05D008036 2.2e-34 149.8 79 94.9
FAN08G3467 Fragaria x ananassa HOM05D017100 ORTHO05D008036 8.0e-32 141.4 85 85.9
RcHm_v2.0_Chr7g0195411 Rosa chinensis HOM05D017100 ORTHO05D008036 9.7e-30 134.4 80 87.5
Prupe.5G115500 Prunus persica HOM05D007041 ORTHO05D008036 1.2e-11 74.3 88 47.7
Gohir.D12G236050 Gossypium hirsutum HOM05D007041 ORTHO05D008036 3.6e-08 62.8 31 83.9
Gorai.008G252800 Gossypium raimondii HOM05D007041 ORTHO05D008036 3.6e-08 62.8 31 83.9
Gohir.A12G234950 Gossypium hirsutum HOM05D007041 ORTHO05D008036 6.1e-08 62.0 71 50.7
Thecc.03G293400 Theobroma cacao HOM05D007041 ORTHO05D008036 6.1e-08 62.0 79 50.6
Potri.003G137600 Populus trichocarpa HOM05D007041 ORTHO05D008036 4.0e-07 59.3 39 61.5
CiPaw.12G084900 Carya illinoinensis HOM05D007041 ORTHO05D008036 5.2e-07 58.9 37 64.9
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 1.2e-06 57.8 87 36.8
CSS0039531 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 1.5e-06 57.4 39 59.0
CSS0019600 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 2.0e-06 57.0 32 71.9
CSS0049473 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 2.0e-06 57.0 31 74.2
Rhsim07G0006100 Rhododendron simsii HOM05D000337 ORTHO05D000297 2.0e-06 57.0 68 39.7
vmacro22517 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 2.0e-06 57.0 64 42.2
QL02p031389 Quercus lobata HOM05D007041 ORTHO05D008036 3.4e-06 56.2 36 66.7
vmacro22515 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 3.4e-06 56.2 30 70.0
AT3G61660 Arabidopsis thaliana HOM05D007041 ORTHO05D008036 4.4e-06 55.8 94 37.2
FvH4_7g16050 Fragaria vesca HOM05D007041 ORTHO05D008036 5.7e-06 55.5 29 79.3
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 5.7e-06 55.5 29 79.3
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 5.7e-06 55.5 29 79.3
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 5.7e-06 55.5 29 79.3
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 5.7e-06 55.5 29 79.3
Potri.001G094000 Populus trichocarpa HOM05D007041 ORTHO05D008036 5.7e-06 55.5 31 67.7
RcHm_v2.0_Chr1g0358991 Rosa chinensis HOM05D007041 ORTHO05D008036 5.7e-06 55.5 29 79.3
vmacro22516 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 5.7e-06 55.5 107 32.7
MD07G1146000 Malus domestica HOM05D007041 ORTHO05D008036 7.5e-06 55.1 29 75.9


User provided reference genes

Program Settings