Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 4.0e-183 644.8 366 100.0
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 7.7e-179 630.6 366 98.1
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.3e-170 602.4 367 94.3
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.6e-160 568.5 369 90.0
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 6.8e-143 511.1 367 83.4
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 8.9e-135 484.2 374 81.6
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 2.5e-100 369.8 369 60.7
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 2.3e-98 363.2 371 61.2
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 8.8e-66 255.0 369 46.3
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 1.8e-63 247.3 378 42.1
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 1.2e-59 234.6 373 41.6
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 1.7e-56 224.2 373 42.4
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 3.7e-56 223.0 378 41.8
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 9.2e-55 218.4 377 40.8
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 2.7e-54 216.9 373 39.7
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 1.0e-53 214.9 372 41.4
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 2.3e-53 213.8 369 41.2
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 2.3e-53 213.8 357 40.3
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 2.9e-53 213.4 373 41.0
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 5.0e-53 212.6 369 41.2
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 6.6e-53 212.2 371 41.0
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 2.8e-51 206.8 379 38.5
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 2.8e-51 206.8 379 38.5
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 2.0e-49 200.7 372 40.6
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 2.6e-49 200.3 376 37.2
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 5.7e-49 199.1 372 37.6
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 2.9e-48 196.8 372 38.4
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 4.9e-48 196.1 365 36.7
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 1.8e-47 194.1 373 37.8
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 9.2e-47 191.8 373 36.7
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 9.2e-47 191.8 371 39.1
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 9.2e-47 191.8 371 39.1
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 2.7e-46 190.3 367 38.7
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 3.5e-46 189.9 365 37.3
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 4.6e-46 189.5 366 38.8
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 4.6e-46 189.5 366 38.8
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 4.6e-46 189.5 366 38.8
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 5.9e-46 189.1 372 37.1
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 1.0e-45 188.3 365 38.9
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 3.9e-45 186.4 364 38.7
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 1.0e-42 178.3 374 36.6
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 2.3e-42 177.2 385 40.8
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 2.3e-42 177.2 373 36.2
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 3.1e-42 176.8 368 36.4
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 4.4e-41 172.9 368 35.3
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 5.8e-41 172.6 365 35.1
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 3.7e-40 169.9 368 35.6
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 6.4e-40 169.1 366 36.6
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 6.4e-40 169.1 305 38.7
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 8.3e-40 168.7 369 33.1
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 1.0e-37 161.8 352 35.5
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 1.1e-36 158.3 293 40.6
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 2.5e-36 157.1 376 35.4
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 6.2e-35 152.5 330 37.0
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 8.9e-34 148.7 266 39.5
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 1.9e-31 141.0 238 41.6
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 1.3e-29 134.8 206 44.7
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 3.3e-28 130.2 319 31.7
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 2.1e-27 127.5 317 32.5
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 3.6e-27 126.7 255 35.3
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 6.4e-08 62.8 191 31.9
Actinidia18297 Actinidia chinensis HOM05D002266 ORTHO05D010337 1.4e-07 61.6 42 71.4


User provided reference genes

Program Settings