Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 2.0e-209 732.3 382 100.0
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 3.5e-206 721.5 382 98.7
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.6e-198 696.0 382 95.5
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 6.1e-195 684.1 382 94.2
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 4.3e-148 528.5 392 76.5
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 1.0e-101 374.4 429 55.2
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 9.5e-87 324.7 429 51.7
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 2.4e-82 310.1 439 49.4
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 4.3e-71 272.7 452 43.8
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 1.6e-70 270.8 450 45.8
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 3.1e-69 266.5 478 43.1
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 6.8e-69 265.4 440 43.4
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 6.4e-67 258.8 457 43.1
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 1.4e-66 257.7 434 43.1
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 1.0e-64 251.5 435 45.7
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 8.6e-64 248.4 469 42.4
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 1.2e-62 244.6 429 43.6
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 2.3e-61 240.4 463 41.7
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 3.4e-60 236.5 440 41.1
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 1.4e-58 231.1 440 40.5
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 2.4e-58 230.3 444 41.9
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 4.1e-58 229.6 437 41.4
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 2.1e-57 227.3 475 40.4
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 7.8e-57 225.3 441 40.1
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 2.3e-56 223.8 433 40.0
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 3.0e-56 223.4 440 40.2
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 5.1e-56 222.6 419 42.2
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 8.6e-56 221.9 411 39.2
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 2.5e-55 220.3 423 38.8
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 3.3e-55 219.9 475 37.9
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 5.6e-55 219.2 441 39.5
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 7.3e-55 218.8 480 36.0
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 2.8e-54 216.9 428 41.4
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 3.6e-54 216.5 424 42.9
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 4.7e-54 216.1 482 40.0
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 8.1e-54 215.3 450 41.1
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 1.4e-53 214.5 437 39.8
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 2.4e-53 213.8 483 38.1
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 3.1e-53 213.4 419 40.3
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 2.0e-52 210.7 425 41.4
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 2.6e-52 210.3 423 38.3
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 1.7e-51 207.6 441 37.0
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 2.9e-51 206.8 420 38.3
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 3.2e-50 203.4 421 38.7
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 4.2e-50 203.0 385 40.0
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 7.1e-50 202.2 423 39.7
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 7.1e-50 202.2 423 39.7
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 1.2e-49 201.4 426 38.3
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 3.5e-49 199.9 426 37.8
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 4.6e-49 199.5 449 39.6
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 7.8e-49 198.7 425 39.8
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 8.7e-48 195.3 424 38.9
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 4.3e-47 193.0 453 36.6
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 4.3e-47 193.0 447 35.1
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 2.1e-46 190.7 414 35.7
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 2.1e-46 190.7 459 35.7
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 4.0e-45 186.4 422 37.9
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 5.3e-45 186.0 433 36.5
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.2e-44 184.9 203 55.2
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 2.0e-44 184.1 414 34.8
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 3.4e-44 183.3 443 35.4
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 7.6e-44 182.2 414 34.5
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 7.6e-44 182.2 449 35.6
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 9.9e-44 181.8 435 35.6
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 9.9e-44 181.8 400 34.8
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 9.9e-44 181.8 400 34.8
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 1.7e-43 181.0 469 35.0
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 2.2e-43 180.6 425 38.4
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 7.1e-42 175.6 426 33.8
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 2.1e-41 174.1 442 37.1
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 2.7e-41 173.7 426 34.3
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 7.9e-41 172.2 452 35.2
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 5.1e-40 169.5 422 34.1
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 5.6e-39 166.0 423 36.2
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 7.4e-39 165.6 432 33.1
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 1.6e-38 164.5 313 37.7
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 2.1e-38 164.1 258 41.5
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 2.1e-38 164.1 421 34.7
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 5.3e-37 159.5 414 34.3
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 2.0e-36 157.5 468 32.1
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 2.2e-35 154.1 436 33.3
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 1.1e-34 151.8 443 33.2
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 4.2e-34 149.8 425 33.9
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 5.5e-34 149.4 439 33.0
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 1.6e-33 147.9 322 36.3
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 2.7e-33 147.1 319 38.9
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 3.5e-33 146.7 418 32.3
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 6.0e-33 146.0 411 32.6
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 6.7e-32 142.5 380 35.8
RcHm_v2.0_Chr7g0225321 Rosa chinensis HOM05D006668 ORTHO05D008252 3.3e-31 140.2 102 76.5
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 2.4e-29 134.0 165 53.3
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 6.9e-29 132.5 462 30.3
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 2.0e-28 131.0 444 32.2
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 5.8e-28 129.4 482 31.1
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 1.3e-27 128.3 322 34.8
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 1.4e-26 124.8 380 31.8
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 1.9e-26 124.4 437 32.0
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 7.1e-26 122.5 167 43.7
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 7.1e-26 122.5 264 35.2
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 4.6e-25 119.8 405 31.1
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 1.3e-22 111.7 275 39.3
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 4.8e-22 109.8 145 43.4
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 1.8e-21 107.8 184 39.1
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 7.2e-18 95.9 225 37.8
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 7.9e-17 92.4 125 49.6
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 6.7e-16 89.4 119 50.4
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 9.7e-15 85.5 291 27.8
Mapoly0050s0110 Marchantia polymorpha HOM05D006668 ORTHO05D008252 6.7e-08 62.8 427 23.4
AUR62043432 Chenopodium quinoa HOM05D006668 ORTHO05D008252 2.5e-07 60.8 127 38.6
Sabra07G0109400 Salix brachista HOM05D006668 ORTHO05D008252 5.7e-07 59.7 71 46.5
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 9.7e-07 58.9 258 27.5
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 9.7e-07 58.9 232 30.6
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 9.7e-07 58.9 232 30.6
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.8e-06 57.4 116 37.1


User provided reference genes

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