Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 2.2e-45 185.3 92 100.0
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 2.2e-45 185.3 92 100.0
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 7.7e-43 176.8 93 96.8
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 5.7e-38 160.6 92 89.1
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 5.7e-22 107.5 98 64.3
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 1.7e-21 105.9 97 62.9
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 1.0e-18 96.7 94 60.6
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 2.9e-18 95.1 95 58.9
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 8.5e-18 93.6 99 53.5
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 1.5e-17 92.8 88 64.8
CANSAT80G2807 Cannabis sativa HOM05D007106 ORTHO05D007770 4.2e-17 91.3 99 53.5
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 5.5e-17 90.9 91 54.9
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 7.2e-17 90.5 88 59.1
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 7.2e-17 90.5 88 59.1
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 2.1e-16 89.0 97 59.8
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 6.1e-16 87.4 88 58.0
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 8.8e-15 83.6 97 51.5
MELO3C001986.2 Cucumis melo HOM05D007106 ORTHO05D007770 1.2e-14 83.2 92 51.1
Cpa.g.sc423.1 Carica papaya HOM05D007106 ORTHO05D007770 1.5e-14 82.8 92 54.3
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 3.4e-14 81.6 92 51.1
CsaV3_1G005530 Cucumis sativus L. HOM05D007106 ORTHO05D007770 7.5e-14 80.5 92 51.1
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 9.8e-14 80.1 93 50.5
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 1.7e-13 79.3 92 52.2
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 1.7e-13 79.3 78 59.0
Eucgr.K02478 Eucalyptus grandis HOM05D007106 ORTHO05D007770 2.8e-13 78.6 94 54.3
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 4.9e-13 77.8 100 51.0
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 4.9e-13 77.8 85 57.6
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 6.3e-13 77.4 89 52.8
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 8.3e-13 77.0 97 52.6
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 8.3e-13 77.0 85 52.9
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 8.3e-13 77.0 85 52.9
Hund02644 Selenicereus undatus HOM05D007106 ORTHO05D007770 8.3e-13 77.0 94 48.9
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 2.4e-12 75.5 91 51.6
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 2.4e-12 75.5 91 51.6
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 2.4e-12 75.5 90 46.7
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 3.1e-12 75.1 84 56.0
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 3.1e-12 75.1 84 56.0
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 4.1e-12 74.7 87 50.6
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 5.4e-12 74.3 84 56.0
Psat4g050160 Pisum sativum HOM05D007106 ORTHO05D007770 1.6e-11 72.8 84 50.0
Ciclev10022899m.g Citrus clementina HOM05D007106 ORTHO05D007770 4.5e-11 71.2 97 48.5
Atru.chr9.252 Acer truncatum HOM05D007106 ORTHO05D007770 7.8e-11 70.5 88 53.4
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 7.8e-11 70.5 89 49.4
Cc04_g16540 Coffea canephora HOM05D007106 ORTHO05D007770 1.3e-10 69.7 85 52.9
Glyma.17G100900 Glycine max HOM05D007106 ORTHO05D007770 1.7e-10 69.3 83 50.6
TWI15G1028 Tripterygium wilfordii HOM05D007106 ORTHO05D007770 1.7e-10 69.3 96 44.8
CiPaw.12G013000 Carya illinoinensis HOM05D007106 ORTHO05D007770 2.3e-10 68.9 88 53.4
Phvul.009G186700 Phaseolus vulgaris HOM05D007106 ORTHO05D007770 2.9e-10 68.6 85 49.4
Phvul.003G189400 Phaseolus vulgaris HOM05D007106 ORTHO05D007770 5.0e-10 67.8 85 48.2
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 5.0e-10 67.8 84 52.4
Ah.11g048350 Amaranthus hybridus HOM05D007106 ORTHO05D007770 1.5e-09 66.2 97 41.2
PGR083G1166 Punica granatum HOM05D007106 ORTHO05D007770 1.5e-09 66.2 94 44.7
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 4.3e-09 64.7 86 50.0
Glyma.05G026000 Glycine max HOM05D007106 ORTHO05D007770 4.3e-09 64.7 83 48.2
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 5.6e-09 64.3 81 50.6
Glyma.06G194600 Glycine max HOM05D007106 ORTHO05D007770 1.2e-08 63.2 83 48.2
Potri.015G062300 Populus trichocarpa HOM05D007106 ORTHO05D007770 1.2e-08 63.2 97 41.2
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 1.6e-08 62.8 93 43.0
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 2.1e-08 62.4 79 49.4
Glyma.04G168400 Glycine max HOM05D007106 ORTHO05D007770 2.8e-08 62.0 85 44.7
Lj4g0015417 Lotus japonicus HOM05D007106 ORTHO05D007770 2.8e-08 62.0 84 46.4
TPR.G9262 Trifolium pratense HOM05D007106 ORTHO05D007770 3.6e-08 61.6 86 46.5
Lj1g0012300 Lotus japonicus HOM05D007106 ORTHO05D007770 6.1e-08 60.8 76 50.0
Actinidia04893 Actinidia chinensis HOM05D007106 ORTHO05D007770 8.0e-08 60.5 85 50.6
CSS0008414 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.0e-07 60.1 86 44.2
Eucgr.B00514 Eucalyptus grandis HOM05D007106 ORTHO05D007770 1.0e-07 60.1 88 44.3
Psat5g199960 Pisum sativum HOM05D007106 ORTHO05D007770 1.0e-07 60.1 88 42.0
EL10Ac5g11028 Beta vulgaris HOM05D007106 ORTHO05D007770 2.3e-07 58.9 105 41.9
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 3.0e-07 58.5 92 41.3
Solyc03g115950.3 Solanum lycopersicum HOM05D007106 ORTHO05D007770 4.0e-07 58.2 87 44.8
THA.LOC104812541 Tarenaya hassleriana HOM05D007106 ORTHO05D007770 5.2e-07 57.8 32 81.2
THA.LOC104821419 Tarenaya hassleriana HOM05D012999 ORTHO05D007770 5.2e-07 57.8 95 40.0
TPR.G11889 Trifolium pratense HOM05D007106 ORTHO05D007770 5.2e-07 57.8 89 38.2
Medtr3g435530 Medicago truncatula HOM05D007106 ORTHO05D007770 6.8e-07 57.4 87 41.4
vmacro16544 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 6.8e-07 57.4 82 41.5
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.5e-06 56.2 105 40.0
Peaxi162Scf00274g00521 Petunia axillaris HOM05D007106 ORTHO05D007770 1.5e-06 56.2 92 42.4
Haze_07318 Corylus avellana HOM05D007106 ORTHO05D007770 2.0e-06 55.8 52 59.6
PGSC0003DMG400019989 Solanum tuberosum HOM05D007106 ORTHO05D007770 2.0e-06 55.8 76 44.7
Lalb_Chr23g0273781 Lupinus albus HOM05D007106 ORTHO05D007770 2.6e-06 55.5 85 47.1
Oeu022764.1 Olea europaea HOM05D007106 ORTHO05D007770 2.6e-06 55.5 85 47.1
PGSC0003DMG400019509 Solanum tuberosum HOM05D007106 ORTHO05D007770 2.6e-06 55.5 88 43.2
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 3.4e-06 55.1 82 45.1
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 3.4e-06 55.1 83 39.8
MBI19_g09311_MAGBIO Magnolia biondii HOM05D007691 ORTHO05D008758 3.4e-06 55.1 82 43.9
Nitab4.5_0001128g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 3.4e-06 55.1 105 36.2
TAR622G1352 Trochodendron aralioides HOM05D007106 ORTHO05D007770 4.4e-06 54.7 84 46.4
Sopen06g004820 Solanum pennellii HOM05D007106 ORTHO05D007770 5.7e-06 54.3 76 44.7
HanXRQChr05g0155941 Helianthus annuus HOM05D007106 ORTHO05D007770 7.5e-06 53.9 90 45.6
Migut.I00186 Erythranthe guttata HOM05D007106 ORTHO05D007770 9.8e-06 53.5 44 56.8
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 9.8e-06 53.5 84 41.7
MBI19_g38148_MAGBIO Magnolia biondii HOM05D007691 ORTHO05D008758 9.8e-06 53.5 82 42.7
Peaxi162Scf01256g00221 Petunia axillaris HOM05D007106 ORTHO05D007770 9.8e-06 53.5 81 44.4


User provided reference genes

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