Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.1e-307 1057.7 583 100.0
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.1e-303 1045.0 583 99.3
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 9.1e-299 1029.6 583 97.8
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 4.9e-260 901.0 583 89.2
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 9.5e-256 886.7 583 87.8
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 1.4e-246 856.3 583 84.7
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.3e-196 690.3 473 86.7
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 6.3e-191 671.4 555 69.5
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 5.7e-184 648.3 559 67.8
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 4.1e-166 589.0 395 80.0
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.6e-165 587.0 556 62.1
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 5.9e-165 585.1 556 60.8
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 2.3e-161 573.2 554 60.5
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 3.0e-161 572.8 554 61.0
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 5.2e-161 572.0 553 61.1
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 1.1e-158 564.3 556 58.1
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 5.4e-158 562.0 554 61.0
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 3.5e-157 559.3 556 59.0
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 7.8e-157 558.1 547 61.4
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 7.3e-155 551.6 555 58.9
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 5.8e-152 542.0 555 58.9
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 2.4e-150 536.6 555 57.8
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 9.2e-150 534.6 562 58.9
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 3.9e-148 529.3 556 58.3
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 6.2e-146 521.9 555 57.3
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 4.0e-145 519.2 555 57.1
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 6.8e-145 518.5 589 54.3
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 1.7e-143 513.8 581 55.1
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 2.9e-143 513.1 556 56.7
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 1.0e-140 504.6 555 54.8
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 4.3e-139 499.2 613 52.4
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 2.3e-137 493.4 553 53.2
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 4.0e-137 492.7 493 59.8
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 2.2e-135 486.9 585 53.7
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 2.9e-135 486.5 557 54.8
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 4.9e-135 485.7 556 54.9
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 7.1e-134 481.9 557 54.0
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 3.0e-132 476.5 564 52.3
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 1.5e-128 464.2 558 52.3
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 7.1e-126 455.3 526 54.4
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 3.5e-125 453.0 557 51.9
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 3.3e-123 446.4 564 50.4
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 3.3e-123 446.4 557 51.2
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 8.1e-122 441.8 559 51.5
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 2.4e-121 440.3 557 50.8
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 2.4e-121 440.3 558 49.5
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 4.0e-121 439.5 561 50.8
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 5.8e-120 435.6 558 49.1
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 1.3e-119 434.5 561 51.2
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 2.9e-119 433.3 558 49.6
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 3.8e-119 433.0 559 50.4
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 6.4e-119 432.2 561 50.6
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 1.1e-118 431.4 567 49.7
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 3.5e-117 426.4 558 48.9
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 1.3e-116 424.5 555 49.0
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 1.7e-116 424.1 563 48.3
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 3.0e-116 423.3 568 48.1
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 6.6e-116 422.2 589 51.3
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 6.6e-116 422.2 589 51.3
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 5.6e-115 419.1 494 52.6
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 3.6e-114 416.4 557 49.0
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 2.4e-113 413.7 555 48.8
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 9.0e-113 411.8 557 48.8
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 4.2e-110 402.9 561 48.1
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 1.8e-108 397.5 573 47.3
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 6.0e-101 372.5 506 49.0
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 7.9e-101 372.1 414 54.8
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 2.4e-97 360.5 498 49.2
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 2.5e-94 350.5 588 42.7
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 2.1e-93 347.4 543 47.0
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 2.2e-90 337.4 557 43.4
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 2.4e-89 334.0 393 51.1
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 7.9e-85 318.9 555 41.8
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 1.8e-84 317.8 557 41.5
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 6.3e-82 309.3 475 46.9
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 1.3e-79 301.6 314 56.1
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 2.2e-79 300.8 558 41.2
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.2e-77 295.0 257 63.8
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 1.0e-76 292.0 480 43.3
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 2.6e-75 287.3 432 46.5
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 6.1e-53 213.0 340 42.4
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 3.6e-37 160.6 241 43.6
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 6.4e-34 149.8 385 35.6
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 4.1e-33 147.1 320 36.9
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 3.7e-26 124.0 160 46.2
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 1.6e-24 118.6 79 81.0
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 4.6e-24 117.1 76 81.6
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 3.9e-23 114.0 598 29.6
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 8.9e-20 102.8 68 82.4
FvH4_5g29470 Fragaria vesca HOM05D007238 ORTHO05D009206 1.2e-19 102.4 58 89.7
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 2.9e-18 97.8 62 75.8
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 8.4e-18 96.3 53 94.3
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 2.4e-17 94.7 65 72.3
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 5.4e-17 93.6 222 36.0
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 2.7e-16 91.3 102 54.9
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 5.1e-15 87.0 67 68.7
FvH4_5g27460 Fragaria vesca HOM05D007238 ORTHO05D009206 7.3e-14 83.2 49 85.7
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 1.6e-13 82.0 699 24.9
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 6.2e-13 80.1 44 90.9
FAN13G3012 Fragaria x ananassa HOM05D007238 ORTHO05D009206 9.0e-12 76.3 44 86.4
FvH4_5g27461 Fragaria vesca HOM05D007238 ORTHO05D009206 2.2e-10 71.6 64 64.1
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 2.2e-10 71.6 39 89.7
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 4.2e-09 67.4 101 46.5
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 1.2e-08 65.9 60 61.7
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 1.2e-08 65.9 60 61.7
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 7.8e-08 63.2 68 52.9


User provided reference genes

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