Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2151 Fragaria x ananassa HOM05D005585 ORTHO05D006905 6.2e-230 800.4 404 100.0
FAN04G2668 Fragaria x ananassa HOM05D005585 ORTHO05D006905 3.0e-184 648.7 385 86.8
FvH4_5g17500 Fragaria vesca HOM05D005585 ORTHO05D006905 1.7e-182 642.9 328 97.0
FAN08G0665 Fragaria x ananassa HOM05D005585 ORTHO05D006905 6.8e-176 620.9 325 96.6
RcHm_v2.0_Chr7g0178161 Rosa chinensis HOM05D005585 ORTHO05D006905 1.3e-158 563.5 326 85.3
Prupe.5G234900 Prunus persica HOM05D005585 ORTHO05D006905 8.6e-131 471.1 326 73.0
MD14G1237600 Malus domestica HOM05D005585 ORTHO05D006905 2.8e-121 439.5 323 71.8
MD06G1228400 Malus domestica HOM05D005585 ORTHO05D006905 1.1e-120 437.6 326 68.7
QL10p030702 Quercus lobata HOM05D005585 ORTHO05D006905 6.2e-113 411.8 305 70.5
Manes.06G004600 Manihot esculenta HOM05D005585 ORTHO05D006905 1.1e-112 411.0 334 62.3
Dinv20235 Davidia involucrata HOM05D005585 ORTHO05D006905 2.2e-110 403.3 326 63.8
TAR628G0421 Trochodendron aralioides HOM05D005585 ORTHO05D006905 8.4e-110 401.4 321 62.3
CSS0043300 Camellia sinensis var. sinensis HOM05D005585 ORTHO05D006905 1.1e-109 401.0 261 70.5
CiPaw.15G144600 Carya illinoinensis HOM05D005585 ORTHO05D006905 1.1e-109 401.0 304 67.8
Potri.012G045200 Populus trichocarpa HOM05D005585 ORTHO05D006905 1.4e-109 400.6 326 62.0
Thecc.03G059000 Theobroma cacao HOM05D005585 ORTHO05D006905 1.4e-109 400.6 321 62.0
Rhsim08G0150200 Rhododendron simsii HOM05D005585 ORTHO05D006905 9.3e-109 397.9 331 61.6
Haze_18886 Corylus avellana HOM05D005585 ORTHO05D006905 1.2e-108 397.5 329 62.9
CANSAT80G1087 Cannabis sativa HOM05D005585 ORTHO05D006905 6.0e-108 395.2 324 62.7
CANSAT80G2587 Cannabis sativa HOM05D005585 ORTHO05D006905 2.3e-107 393.3 324 62.0
Nn5g30598 Nelumbo nucifera HOM05D005585 ORTHO05D006905 4.3e-106 389.0 311 63.7
Duzib068G1453 Durio zibethinus HOM05D005585 ORTHO05D006905 2.1e-105 386.7 320 61.2
TWI60G0738 Tripterygium wilfordii HOM05D005585 ORTHO05D006905 3.7e-105 386.0 323 60.1
Oeu026263.1 Olea europaea HOM05D005585 ORTHO05D006905 1.1e-104 384.4 268 67.9
arahy.Tifrunner.gnm1.ann1.E1YKD2 Arachis hypogaea HOM05D005585 ORTHO05D006905 1.4e-104 384.0 319 62.1
COL.COLO4_28892 Corchorus olitorius HOM05D005585 ORTHO05D006905 3.1e-104 382.9 325 61.8
GSVIVG01008457001 Vitis vinifera HOM05D005585 ORTHO05D006905 3.1e-104 382.9 264 68.6
Ciclev10015784m.g Citrus clementina HOM05D005585 ORTHO05D006905 9.0e-104 381.3 276 67.4
Hma1.2p1_0163F.1_g072970 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 1.2e-103 380.9 320 60.9
PGSC0003DMG400005757 Solanum tuberosum HOM05D005585 ORTHO05D006905 1.2e-103 380.9 283 66.1
MELO3C002139.2 Cucumis melo HOM05D005585 ORTHO05D006905 1.5e-103 380.6 325 60.3
Gohir.A09G175000 Gossypium hirsutum HOM05D005585 ORTHO05D006905 2.0e-103 380.2 321 60.7
Lalb_Chr22g0353511 Lupinus albus HOM05D005585 ORTHO05D006905 2.6e-103 379.8 323 62.2
CsaV3_1G007220 Cucumis sativus L. HOM05D005585 ORTHO05D006905 1.0e-102 377.9 325 59.7
Phvul.004G149700 Phaseolus vulgaris HOM05D005585 ORTHO05D006905 1.3e-102 377.5 303 62.7
ClCG04G010560 Citrullus lanatus HOM05D005585 ORTHO05D006905 1.7e-102 377.1 326 59.5
Medtr6g069850 Medicago truncatula HOM05D005585 ORTHO05D006905 2.9e-102 376.3 281 64.8
Lj2g0015776 Lotus japonicus HOM05D005585 ORTHO05D006905 6.5e-102 375.2 282 65.2
Gorai.006G191400 Gossypium raimondii HOM05D005585 ORTHO05D006905 8.4e-102 374.8 321 59.8
arahy.Tifrunner.gnm1.ann1.8TLB5V Arachis hypogaea HOM05D005585 ORTHO05D006905 1.4e-101 374.0 320 61.2
Sabra12G0031400 Salix brachista HOM05D005585 ORTHO05D006905 1.4e-101 374.0 299 61.5
Psat1g030240 Pisum sativum HOM05D005585 ORTHO05D006905 1.9e-101 373.6 327 58.7
Cc04_g06090 Coffea canephora HOM05D005585 ORTHO05D006905 2.5e-101 373.2 320 59.1
Thhalv10021015m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 3.2e-101 372.9 331 56.8
PGR044G1909 Punica granatum HOM05D005585 ORTHO05D006905 3.2e-101 372.9 282 62.8
Glyma.07G103200 Glycine max HOM05D005585 ORTHO05D006905 4.2e-101 372.5 281 65.5
Lalb_Chr14g0370621 Lupinus albus HOM05D005585 ORTHO05D006905 5.5e-101 372.1 322 59.3
Eucgr.B00886 Eucalyptus grandis HOM05D005585 ORTHO05D006905 9.3e-101 371.3 271 66.1
Hund22311 Selenicereus undatus HOM05D005585 ORTHO05D006905 1.2e-100 370.9 323 59.8
vmacro08951 Vaccinium macrocarpon HOM05D005585 ORTHO05D006905 1.2e-100 370.9 382 53.4
Ca_25346_v3 Cicer arietinum L. HOM05D005585 ORTHO05D006905 2.1e-100 370.2 320 59.4
Sed0009200 Sechium edule HOM05D005585 ORTHO05D006905 2.7e-100 369.8 261 66.7
TPR.G8624 Trifolium pratense HOM05D005585 ORTHO05D006905 3.5e-100 369.4 325 59.1
Aqoxy5G00867 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 1.0e-99 367.9 281 63.7
Sc12g0007980 Simmondsia chinensis HOM05D005585 ORTHO05D006905 1.8e-99 367.1 270 66.3
Lsat_1_v5_gn_8_83620 Lactuca sativa HOM05D005585 ORTHO05D006905 2.3e-99 366.7 262 65.3
EL10Ac4g09125 Beta vulgaris HOM05D005585 ORTHO05D006905 5.1e-99 365.5 324 56.8
ECA236G2254 Erigeron canadensis HOM05D005585 ORTHO05D006905 5.1e-99 365.5 285 61.8
BcaC05g28739 Brassica carinata HOM05D005585 ORTHO05D006905 1.1e-98 364.4 283 61.5
BolC5t33576H Brassica oleracea HOM05D005585 ORTHO05D006905 1.1e-98 364.4 283 61.5
MSTRG.6190 Avicennia marina HOM05D005585 ORTHO05D006905 1.5e-98 364.0 281 62.3
HanXRQChr06g0178071 Helianthus annuus HOM05D005585 ORTHO05D006905 2.5e-98 363.2 266 65.0
BcaB06g25853 Brassica carinata HOM05D005585 ORTHO05D006905 1.3e-97 360.9 324 56.5
BraA01t03712Z Brassica rapa HOM05D005585 ORTHO05D006905 1.6e-97 360.5 283 59.7
ATR1153G069 Amborella trichopoda HOM05D005585 ORTHO05D006905 4.8e-97 359.0 314 59.6
THA.LOC104821828 Tarenaya hassleriana HOM05D005585 ORTHO05D006905 6.3e-97 358.6 319 57.4
C05p48400 Brassica napus HOM05D005585 ORTHO05D006905 8.2e-97 358.2 328 54.9
Migut.I00267 Erythranthe guttata HOM05D005585 ORTHO05D006905 8.2e-97 358.2 285 62.8
A01p36480 Brassica napus HOM05D005585 ORTHO05D006905 1.4e-96 357.5 320 55.0
AUR62001019 Chenopodium quinoa HOM05D005585 ORTHO05D006905 1.4e-96 357.5 254 66.1
Sp3g16030 Schrenkiella parvula HOM05D005585 ORTHO05D006905 1.8e-96 357.1 329 54.4
A05p31890 Brassica napus HOM05D005585 ORTHO05D006905 6.9e-96 355.1 328 54.0
PSO017G0826 Papaver somniferum HOM05D005585 ORTHO05D006905 6.9e-96 355.1 278 63.7
BraA05t22021Z Brassica rapa HOM05D005585 ORTHO05D006905 9.0e-96 354.8 326 54.9
BcaC09g48755 Brassica carinata HOM05D005585 ORTHO05D006905 1.5e-95 354.0 283 60.1
AL3G31080 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 2.0e-95 353.6 261 62.8
Nitab4.5_0001264g0050 Nicotiana tabacum HOM05D005585 ORTHO05D006905 2.0e-95 353.6 282 62.4
Carub.0003s1764 Capsella rubella HOM05D005585 ORTHO05D006905 2.6e-95 353.2 261 62.8
PSO170G1171 Papaver somniferum HOM05D005585 ORTHO05D006905 2.6e-95 353.2 279 62.7
C01p46240 Brassica napus HOM05D005585 ORTHO05D006905 7.6e-95 351.7 285 59.6
BolC1t04585H Brassica oleracea HOM05D005585 ORTHO05D006905 7.6e-95 351.7 285 59.6
DCAR_003540 Daucus carota HOM05D005585 ORTHO05D006905 1.3e-94 350.9 273 62.6
Aa31LG8G4780 Aethionema arabicum HOM05D005585 ORTHO05D006905 2.9e-94 349.7 316 55.4
Nitab4.5_0010397g0010 Nicotiana tabacum HOM05D005585 ORTHO05D006905 8.5e-94 348.2 261 65.1
CARHR093240 Cardamine hirsuta HOM05D005585 ORTHO05D006905 4.2e-93 345.9 329 54.7
AT3G17910 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 7.2e-93 345.1 332 53.6
Solyc03g118610.4 Solanum lycopersicum HOM05D005585 ORTHO05D006905 7.2e-93 345.1 321 57.3
BcaB04g20808 Brassica carinata HOM05D005585 ORTHO05D006905 3.6e-92 342.8 335 53.7
SalBow7G1179 Salvia bowleyana HOM05D005585 ORTHO05D006905 3.6e-92 342.8 282 60.3
Sopen03g037560 Solanum pennellii HOM05D005585 ORTHO05D006905 1.5e-90 337.4 283 60.8
CDE04G0750 Ceratophyllum demersum HOM05D001130 ORTHO05D006905 2.8e-89 333.2 286 60.5
Os03g0200700 Oryza sativa ssp. japonica HOM05D005585 ORTHO05D006905 4.8e-89 332.4 271 59.4
HPP92_019169 Vanilla planifolia HOM05D005585 ORTHO05D006905 8.2e-89 331.6 280 57.9
Aqoxy5G00865 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 1.9e-85 320.5 234 65.8
Glyma.09G174400 Glycine max HOM05D005585 ORTHO05D006905 1.9e-85 320.5 233 67.0
Ah.06g192310 Amaranthus hybridus HOM05D005585 ORTHO05D008527 2.5e-85 320.1 259 59.8
Hma1.2p1_0163F.1_g072980 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 2.5e-85 320.1 225 66.7
Lj5C159G17 Lonicera japonica HOM05D005585 ORTHO05D006905 2.5e-85 320.1 220 67.3
Peaxi162Scf00314g00335 Petunia axillaris HOM05D005585 ORTHO05D006905 3.2e-85 319.7 233 66.1
Cpa.g.c34889 Carica papaya HOM05D005585 ORTHO05D006905 2.1e-84 317.0 220 69.5
VMungo0464G1491 Vigna mungo HOM05D005585 ORTHO05D006905 6.1e-84 315.5 221 69.7
TAR628G1367 Trochodendron aralioides HOM05D005585 ORTHO05D006905 9.7e-82 308.1 232 65.5
unitig_27.g25108 Utricularia gibba HOM05D005585 ORTHO05D006905 1.3e-81 307.8 281 56.6
AUR62004935 Chenopodium quinoa HOM05D005585 ORTHO05D006905 2.9e-78 296.6 220 63.2
FAN13G1174 Fragaria x ananassa HOM05D005585 ORTHO05D006905 6.1e-76 288.9 163 91.4
Zm00001eb007820 Zea mays HOM05D005585 ORTHO05D006905 1.1e-74 284.6 234 60.3
QL12p007232 Quercus lobata HOM05D005585 ORTHO05D006905 1.7e-73 280.8 378 45.2
CAN.G843.48 Capsicum annuum HOM05D005585 ORTHO05D006905 5.3e-72 275.8 270 53.7
Cpa.g.sc3.377 Carica papaya HOM05D005585 ORTHO05D006905 3.3e-66 256.5 300 49.7
Mapoly0094s0071 Marchantia polymorpha HOM05D005585 ORTHO05D006905 4.5e-63 246.1 275 46.2
Eucgr.B00986 Eucalyptus grandis HOM05D005585 ORTHO05D006905 2.3e-59 233.8 174 63.2
Pp3c5_4480 Physcomitrium patens HOM05D005585 ORTHO05D006905 9.8e-58 228.4 299 41.8
CARHR038140 Cardamine hirsuta HOM05D005585 ORTHO05D006905 2.4e-56 223.8 336 39.3
SMO147G0391 Selaginella moellendorffii HOM05D005585 ORTHO05D006905 3.8e-54 216.5 281 41.3
SGA_v2.0_scaffold58G20371 Striga asiatica HOM05D005585 ORTHO05D006905 6.6e-54 215.7 185 60.5
AL1G55160 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 7.2e-53 212.2 290 43.8
Gohir.D09G170128 Gossypium hirsutum HOM05D005585 ORTHO05D006905 1.2e-52 211.5 153 66.7
SEGI_34948 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 2.3e-51 207.2 157 61.8
Thhalv10011732m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 5.7e-50 202.6 251 42.6
AT1G48510 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 2.8e-49 200.3 267 43.4
Carub.0001s3764 Capsella rubella HOM05D005585 ORTHO05D006905 2.9e-46 190.3 334 36.8
TAR628G1286 Trochodendron aralioides HOM05D005585 ORTHO05D006905 8.0e-44 182.2 145 59.3
Carub.0001s3763 Capsella rubella HOM05D005585 ORTHO05D006905 6.8e-43 179.1 328 35.4
AagrBONN_evm.TU.Sc2ySwM_340.176 Anthoceros agrestis HOM05D005585 ORTHO05D006905 8.3e-41 172.2 242 41.3
BcaB04g20806 Brassica carinata HOM05D005585 ORTHO05D006905 2.1e-36 157.5 161 48.4
CBR_g50834 Chara braunii HOM05D002601 ORTHO05D002884 2.1e-36 157.5 364 31.3
Zm00001eb338430 Zea mays HOM05D005585 ORTHO05D006905 2.2e-33 147.5 87 77.0
Gohir.D09G170071 Gossypium hirsutum HOM05D005585 ORTHO05D006905 2.9e-33 147.1 153 52.9
BcaB08g34867 Brassica carinata HOM05D005585 ORTHO05D006905 1.1e-32 145.2 226 38.9
PRCOL_00002102 Prasinoderma coloniale HOM05D005585 ORTHO05D006905 1.9e-32 144.4 281 31.3
Zm00001eb099110 Zea mays HOM05D005585 ORTHO05D006905 2.4e-32 144.1 122 59.0
SEGI_19570 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 1.9e-29 134.4 150 48.0
Cre16.g664700 Chlamydomonas reinhardtii HOM05D005585 ORTHO05D006905 4.7e-20 103.2 305 27.5
CBR_g629 Chara braunii HOM05D005585 ORTHO05D006905 9.9e-18 95.5 223 31.4
CDE07G0810 Ceratophyllum demersum HOM05D005585 ORTHO05D006905 2.4e-11 74.3 90 45.6


User provided reference genes

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