Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.7e-182 641.3 311 100.0
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 7.0e-181 637.1 311 99.4
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 3.4e-34 149.8 315 34.0
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 3.8e-33 146.4 315 33.0
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 7.1e-32 142.1 315 32.4
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 7.1e-32 142.1 317 33.1
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 1.6e-31 141.0 315 33.3
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 2.7e-31 140.2 315 32.4
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 4.6e-31 139.4 315 32.4
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 7.8e-31 138.7 316 32.3
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 7.8e-31 138.7 315 32.7
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 1.3e-30 137.9 315 32.1
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 1.3e-30 137.9 320 31.9
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 1.7e-30 137.5 315 32.1
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 2.3e-30 137.1 312 31.7
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 3.9e-30 136.3 312 32.1
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 5.1e-30 136.0 315 31.1
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 5.1e-30 136.0 315 31.4
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.6e-30 135.6 312 30.8
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 8.7e-30 135.2 323 32.2
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 8.7e-30 135.2 312 30.4
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 8.7e-30 135.2 315 32.1
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 1.5e-29 134.4 315 29.8
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 1.5e-29 134.4 315 32.1
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.9e-29 134.0 312 30.8
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.9e-29 134.0 312 30.8
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 1.9e-29 134.0 319 31.0
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.9e-29 134.0 315 30.5
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 1.9e-29 134.0 315 31.4
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 2.5e-29 133.7 315 30.2
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 2.5e-29 133.7 315 30.5
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 4.3e-29 132.9 315 31.4
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 5.6e-29 132.5 315 30.2
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 5.6e-29 132.5 316 31.0
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 7.3e-29 132.1 315 30.5
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 9.6e-29 131.7 328 30.8
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 9.6e-29 131.7 312 30.8
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 9.6e-29 131.7 315 31.1
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 9.6e-29 131.7 315 30.2
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.3e-28 131.3 315 31.1
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.6e-28 131.0 315 31.1
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.6e-28 131.0 315 30.5
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 2.1e-28 130.6 315 31.1
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 2.1e-28 130.6 317 30.0
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.1e-28 130.6 315 31.4
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 2.1e-28 130.6 316 28.5
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 8.1e-28 128.6 319 32.0
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 8.1e-28 128.6 319 30.1
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 1.4e-27 127.9 315 30.2
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.4e-27 127.9 315 31.1
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 5.3e-27 125.9 315 30.8
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.2e-26 124.8 317 29.3
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 1.5e-26 124.4 316 31.3
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 2.0e-26 124.0 315 30.5
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 2.0e-26 124.0 317 29.3
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 2.0e-26 124.0 315 30.5
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 3.4e-26 123.2 316 28.2
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 7.6e-26 122.1 315 29.5
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 7.6e-26 122.1 315 28.6
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 9.9e-26 121.7 315 30.5
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 1.3e-25 121.3 315 30.8
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 2.9e-25 120.2 315 30.8
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 6.4e-25 119.0 178 41.0
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 1.9e-24 117.5 316 29.4
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.4e-24 117.1 303 29.0
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 1.6e-23 114.4 195 39.0
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 1.0e-22 111.7 187 39.6
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 2.5e-21 107.1 195 36.4
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 2.5e-21 107.1 318 27.0
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 3.3e-21 106.7 312 28.2
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 5.6e-21 105.9 134 44.0
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 9.6e-21 105.1 197 37.6
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.1e-20 104.0 180 36.7
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 2.8e-20 103.6 187 35.8
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 3.1e-19 100.1 315 27.3
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 4.5e-18 96.3 168 38.1
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 4.5e-18 96.3 168 38.1
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 4.5e-18 96.3 319 27.6
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 4.5e-18 96.3 198 36.9
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 1.3e-17 94.7 319 28.5
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 7.1e-16 89.0 133 40.6
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 7.1e-16 89.0 182 35.7
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 6.7e-14 82.4 98 44.9
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 7.4e-13 79.0 272 26.1
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 7.4e-13 79.0 173 32.9
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 3.7e-12 76.6 102 41.2
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 1.5e-10 71.2 179 29.6
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 4.9e-09 66.2 51 51.0
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.4e-08 64.7 51 51.0
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 3.5e-07 60.1 87 39.1
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 3.9e-06 56.6 207 28.0
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 5.1e-06 56.2 215 24.2
FvH4_6g20141 Fragaria vesca HOM05D017843 ORTHO05D197093 6.7e-06 55.8 72 41.7


User provided reference genes

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