Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.2e-149 533.1 263 100.0
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 3.3e-139 498.4 263 94.7
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.4e-129 465.7 296 81.8
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 5.8e-128 461.1 264 87.9
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.7e-122 441.8 272 84.9
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 7.4e-107 391.0 263 77.6
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 4.4e-99 365.2 234 79.5
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 5.2e-92 341.7 272 67.3
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 7.7e-88 327.8 277 64.3
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 1.3e-82 310.5 273 62.3
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 7.0e-81 304.7 271 62.0
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 2.9e-79 299.3 275 61.1
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 1.5e-78 297.0 265 58.9
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 4.2e-78 295.4 249 64.3
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 3.6e-77 292.4 270 58.9
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 3.4e-75 285.8 269 59.1
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 3.4e-75 285.8 283 55.8
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 2.8e-74 282.7 268 55.6
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 3.7e-74 282.3 233 63.9
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 8.3e-74 281.2 278 59.0
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 4.1e-73 278.9 197 68.0
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 7.0e-73 278.1 227 63.0
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.6e-72 276.9 193 70.5
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 4.5e-72 275.4 198 69.2
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 1.0e-71 274.2 192 69.3
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 2.3e-71 273.1 191 70.2
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 2.9e-71 272.7 198 69.2
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 3.8e-71 272.3 223 63.2
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 3.8e-71 272.3 193 71.5
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.5e-70 270.4 215 63.7
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 4.2e-70 268.9 236 58.9
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 5.5e-70 268.5 194 68.6
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 5.5e-70 268.5 225 60.4
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 7.2e-70 268.1 200 67.0
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 7.2e-70 268.1 252 58.3
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 1.2e-69 267.3 200 66.0
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 1.6e-69 266.9 193 69.9
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 2.8e-69 266.2 197 70.6
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 3.6e-69 265.8 192 67.2
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 3.6e-69 265.8 200 67.5
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 3.6e-69 265.8 272 54.0
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 4.7e-69 265.4 223 61.4
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 8.0e-69 264.6 241 56.8
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 1.0e-68 264.2 193 66.8
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.0e-68 264.2 227 60.8
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 1.0e-68 264.2 193 68.4
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 1.0e-68 264.2 183 71.6
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 1.8e-68 263.5 200 65.0
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 1.8e-68 263.5 293 54.3
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 1.8e-68 263.5 225 60.0
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 2.3e-68 263.1 194 67.5
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 3.0e-68 262.7 194 66.0
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 3.0e-68 262.7 219 61.2
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 8.9e-68 261.2 194 67.0
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 8.9e-68 261.2 267 53.2
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 8.9e-68 261.2 200 68.0
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 1.2e-67 260.8 216 62.5
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.6e-67 259.6 194 65.5
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 5.7e-67 258.5 219 60.7
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.3e-66 257.3 250 55.2
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 1.3e-66 257.3 193 65.3
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 1.7e-66 256.9 193 66.8
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.2e-66 256.5 196 63.3
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 2.2e-66 256.5 276 52.2
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 6.3e-66 255.0 196 62.8
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 8.3e-66 254.6 159 76.1
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 8.3e-66 254.6 159 76.1
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 1.4e-65 253.8 216 61.6
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 2.4e-65 253.1 216 61.1
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 3.1e-65 252.7 218 62.8
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 4.1e-65 252.3 211 62.1
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 4.1e-65 252.3 233 57.1
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 5.4e-65 251.9 169 69.2
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 7.0e-65 251.5 163 74.2
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 7.0e-65 251.5 216 61.1
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 9.2e-65 251.1 219 62.1
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 1.2e-64 250.8 194 66.0
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 1.6e-64 250.4 224 55.4
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 2.7e-64 249.6 191 63.9
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 2.7e-64 249.6 162 71.6
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 7.8e-64 248.1 200 59.5
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 1.0e-63 247.7 210 64.3
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 1.7e-63 246.9 196 63.3
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 1.7e-63 246.9 220 59.1
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 5.0e-63 245.4 205 60.5
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 8.6e-63 244.6 163 71.2
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 8.6e-63 244.6 175 67.4
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.1e-62 244.2 282 51.4
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 5.6e-62 241.9 219 56.6
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.3e-60 236.5 204 56.4
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 3.0e-60 236.1 163 67.5
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 3.4e-59 232.6 210 61.0
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 9.8e-59 231.1 194 60.3
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 2.0e-56 223.4 187 57.8
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 3.3e-54 216.1 214 54.2
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 2.1e-53 213.4 311 42.8
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 8.0e-53 211.5 186 56.5
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 4.9e-50 202.2 125 75.2
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 9.5e-46 188.0 197 45.7
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 1.6e-45 187.2 168 52.4
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 9.2e-41 171.4 188 51.1
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 1.2e-37 161.0 142 51.4
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 2.1e-32 143.7 162 38.9
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.3e-31 141.0 161 43.5
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 1.7e-31 140.6 135 53.3
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 1.2e-24 117.9 66 78.8
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 4.6e-24 115.9 110 57.3
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 4.8e-21 105.9 224 33.9
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 8.1e-21 105.1 80 66.2
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 4.5e-19 99.4 198 32.3
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 4.5e-19 99.4 162 34.0
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-14 84.7 77 55.8
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 1.4e-12 77.8 101 47.5
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 1.6e-08 64.3 94 41.5
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 7.9e-08 62.0 98 39.8


User provided reference genes

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