Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2046 Fragaria x ananassa HOM05D004580 ORTHO05D005917 1.7e-188 662.5 345 100.0
FvH4_6g23990 Fragaria vesca HOM05D004580 ORTHO05D005917 9.3e-150 533.9 282 90.8
FAN14G1039 Fragaria x ananassa HOM05D004580 ORTHO05D005917 9.3e-150 533.9 282 90.8
FAN05G1019 Fragaria x ananassa HOM05D004580 ORTHO05D005917 3.5e-149 531.9 287 89.5
RcHm_v2.0_Chr7g0243401 Rosa chinensis HOM05D004580 ORTHO05D005917 1.6e-146 523.1 282 89.4
RcHm_v2.0_Chr1g0321971 Rosa chinensis HOM05D004580 ORTHO05D005917 1.7e-143 513.1 282 86.9
Prupe.1G521000 Prunus persica HOM05D004580 ORTHO05D005917 8.7e-132 474.2 285 80.7
MD08G1227100 Malus domestica HOM05D004580 ORTHO05D005917 1.1e-131 473.8 285 79.6
FvH4_5g29380 Fragaria vesca HOM05D004580 ORTHO05D005917 1.9e-131 473.0 279 84.2
MD15G1419400 Malus domestica HOM05D004580 ORTHO05D005917 9.6e-131 470.7 285 80.4
CiPaw.07G178200 Carya illinoinensis HOM05D004580 ORTHO05D005917 1.1e-129 467.2 285 77.5
Manes.18G065933 Manihot esculenta HOM05D004580 ORTHO05D005917 2.6e-128 462.6 283 77.4
COL.COLO4_12032 Corchorus olitorius HOM05D004580 ORTHO05D005917 3.8e-127 458.8 283 75.3
Gorai.010G039500 Gossypium raimondii HOM05D004580 ORTHO05D005917 2.1e-125 453.0 283 74.6
TWI12G1022 Tripterygium wilfordii HOM05D004580 ORTHO05D005917 6.1e-125 451.4 285 76.1
Atru.chr13.1137 Acer truncatum HOM05D004580 ORTHO05D005917 1.8e-124 449.9 284 77.5
Aa31LG9G14650 Aethionema arabicum HOM05D004580 ORTHO05D005917 3.0e-124 449.1 282 76.2
Duzib093G0091 Durio zibethinus HOM05D004580 ORTHO05D005917 3.0e-124 449.1 283 74.6
Gohir.D06G035500 Gossypium hirsutum HOM05D004580 ORTHO05D005917 3.0e-124 449.1 283 74.2
Cfa013658 Carpinus fangiana HOM05D004580 ORTHO05D005917 3.9e-124 448.7 285 75.4
Sed0021368 Sechium edule HOM05D004580 ORTHO05D005917 5.1e-124 448.4 285 75.1
Gohir.A06G034900 Gossypium hirsutum HOM05D004580 ORTHO05D005917 8.7e-124 447.6 283 73.9
THA.LOC104813113 Tarenaya hassleriana HOM05D004580 ORTHO05D005917 1.1e-123 447.2 283 76.0
MELO3C011036.2 Cucumis melo HOM05D004580 ORTHO05D005917 1.9e-123 446.4 286 74.5
AT4G08960 Arabidopsis thaliana HOM05D004580 ORTHO05D005917 3.3e-123 445.7 282 74.8
Ciclev10001487m.g Citrus clementina HOM05D004580 ORTHO05D005917 4.3e-123 445.3 284 75.4
CANSAT25G2089 Cannabis sativa HOM05D004580 ORTHO05D005917 5.7e-123 444.9 282 76.6
ClCG08G011200 Citrullus lanatus HOM05D004580 ORTHO05D005917 5.7e-123 444.9 285 75.4
Haze_22292 Corylus avellana HOM05D004580 ORTHO05D005917 2.2e-122 443.0 285 74.7
CsaV3_2G029780 Cucumis sativus L. HOM05D004580 ORTHO05D005917 2.2e-122 443.0 282 75.5
Hma1.2p1_0044F.1_g026170 Hydrangea macrophylla HOM05D004580 ORTHO05D005917 2.8e-122 442.6 285 74.0
Duzib041G0230 Durio zibethinus HOM05D004580 ORTHO05D005917 6.3e-122 441.4 284 73.2
Potri.005G162900 Populus trichocarpa HOM05D004580 ORTHO05D005917 1.8e-121 439.9 284 74.6
AL6G41550 Arabidopsis lyrata HOM05D004580 ORTHO05D005917 4.1e-121 438.7 282 73.8
TAR625G1360 Trochodendron aralioides HOM05D004580 ORTHO05D005917 4.1e-121 438.7 284 74.3
Sp6g08660 Schrenkiella parvula HOM05D004580 ORTHO05D005917 5.3e-121 438.3 282 73.4
Sabra05G0123100 Salix brachista HOM05D004580 ORTHO05D005917 9.1e-121 437.6 284 74.3
Thhalv10028722m.g Eutrema salsugineum HOM05D004580 ORTHO05D005917 1.2e-120 437.2 282 73.4
CARHR259970 Cardamine hirsuta HOM05D004580 ORTHO05D005917 2.0e-120 436.4 282 74.1
Lsat_1_v5_gn_4_64561 Lactuca sativa HOM05D004580 ORTHO05D005917 3.4e-120 435.6 285 73.3
Dinv17643 Davidia involucrata HOM05D004580 ORTHO05D005917 4.5e-120 435.3 285 73.0
A03p28330 Brassica napus HOM05D004580 ORTHO05D005917 7.7e-120 434.5 282 73.0
arahy.Tifrunner.gnm1.ann1.T3Z839 Arachis hypogaea HOM05D004580 ORTHO05D005917 1.0e-119 434.1 283 72.4
Nn1g05417 Nelumbo nucifera HOM05D004580 ORTHO05D005917 1.0e-119 434.1 284 71.5
BcaB01g02835 Brassica carinata HOM05D004580 ORTHO05D005917 1.3e-119 433.7 283 72.8
Carub.0006s2756 Capsella rubella HOM05D004580 ORTHO05D005917 1.3e-119 433.7 282 73.0
BcaB01g02381 Brassica carinata HOM05D004580 ORTHO05D005917 1.7e-119 433.3 283 72.8
BraA03t12037Z Brassica rapa HOM05D004580 ORTHO05D005917 1.7e-119 433.3 282 73.4
Eucgr.B00032 Eucalyptus grandis HOM05D004580 ORTHO05D005917 1.7e-119 433.3 287 73.5
QL12p037342 Quercus lobata HOM05D004580 ORTHO05D005917 1.7e-119 433.3 285 74.0
arahy.Tifrunner.gnm1.ann1.UE4JHM Arachis hypogaea HOM05D004580 ORTHO05D005917 2.2e-119 433.0 283 72.4
BcaB01g02823 Brassica carinata HOM05D004580 ORTHO05D005917 2.9e-119 432.6 283 72.8
BcaC01g04745 Brassica carinata HOM05D004580 ORTHO05D005917 3.8e-119 432.2 282 72.7
C03p34240 Brassica napus HOM05D004580 ORTHO05D005917 3.8e-119 432.2 282 72.7
BolC3t15733H Brassica oleracea HOM05D004580 ORTHO05D005917 3.8e-119 432.2 282 72.7
Thecc.08G104300 Theobroma cacao HOM05D004580 ORTHO05D005917 1.9e-118 429.9 269 74.7
PGR031G1028 Punica granatum HOM05D004580 ORTHO05D005917 2.5e-118 429.5 287 72.5
Nn5g30292 Nelumbo nucifera HOM05D004580 ORTHO05D005917 4.2e-118 428.7 288 70.8
Nn5g30036 Nelumbo nucifera HOM05D004580 ORTHO05D005917 7.2e-118 427.9 287 71.4
C09p37760 Brassica napus HOM05D004580 ORTHO05D005917 1.2e-117 427.2 282 71.3
BolC9t56609H Brassica oleracea HOM05D004580 ORTHO05D005917 1.2e-117 427.2 282 71.3
Sabra02G0077800 Salix brachista HOM05D004580 ORTHO05D005917 1.2e-117 427.2 284 72.9
Actinidia04333 Actinidia chinensis HOM05D004580 ORTHO05D005917 6.1e-117 424.9 301 68.4
ECA236G1081 Erigeron canadensis HOM05D004580 ORTHO05D005917 1.8e-116 423.3 285 70.5
MELO3C003564.2 Cucumis melo HOM05D004580 ORTHO05D005917 3.0e-116 422.5 282 69.9
VMungo1127G0933 Vigna mungo HOM05D004580 ORTHO05D005917 3.0e-116 422.5 285 71.2
Aqoxy7G04111 Aquilegia oxysepala HOM05D004580 ORTHO05D005917 6.7e-116 421.4 281 73.7
ClCG11G014220 Citrullus lanatus HOM05D004580 ORTHO05D005917 2.6e-115 419.5 281 70.8
Phvul.011G102600 Phaseolus vulgaris HOM05D004580 ORTHO05D005917 3.3e-115 419.1 285 70.5
CsaV3_3G047600 Cucumis sativus L. HOM05D004580 ORTHO05D005917 7.4e-115 417.9 282 69.5
Potri.002G099000 Populus trichocarpa HOM05D004580 ORTHO05D005917 7.4e-115 417.9 284 72.5
Glyma.11G184601 Glycine max HOM05D004580 ORTHO05D005917 2.2e-114 416.4 285 71.2
Sed0008659 Sechium edule HOM05D004580 ORTHO05D005917 2.2e-114 416.4 264 71.2
vmacro15988 Vaccinium macrocarpon HOM05D004580 ORTHO05D005917 6.3e-114 414.8 286 69.2
Cpa.g.sc36.160 Carica papaya HOM05D004580 ORTHO05D005917 8.2e-114 414.5 264 73.1
TAR381G0740 Trochodendron aralioides HOM05D004580 ORTHO05D005917 8.2e-114 414.5 284 69.4
Medtr4g053370 Medicago truncatula HOM05D004580 ORTHO05D005917 1.1e-113 414.1 283 71.0
Ca_19393_v3 Cicer arietinum L. HOM05D004580 ORTHO05D005917 3.1e-113 412.5 248 77.4
CSS0036827 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 2.0e-112 409.8 281 72.2
CSS0039091 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 2.0e-112 409.8 281 72.2
Nitab4.5_0000069g0120 Nicotiana tabacum HOM05D004580 ORTHO05D005917 5.9e-112 408.3 281 67.3
Lalb_Chr03g0028011 Lupinus albus HOM05D004580 ORTHO05D005917 1.3e-111 407.1 287 68.6
Nitab4.5_0013217g0010 Nicotiana tabacum HOM05D004580 ORTHO05D005917 2.2e-111 406.4 281 67.3
HanXRQChr04g0124871 Helianthus annuus HOM05D004580 ORTHO05D005917 3.8e-111 405.6 285 67.0
Oeu036766.1 Olea europaea HOM05D004580 ORTHO05D005917 5.0e-111 405.2 286 68.5
CDE05G3003 Ceratophyllum demersum HOM05D004580 ORTHO05D005917 8.5e-111 404.4 282 66.0
CSS0011251 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 1.1e-110 404.1 270 73.0
GSVIVG01009068001 Vitis vinifera HOM05D004580 ORTHO05D005917 1.9e-110 403.3 284 69.7
BcaC04g20934 Brassica carinata HOM05D004580 ORTHO05D005917 3.2e-110 402.5 282 69.1
MBI05_g34722_MAGBIO Magnolia biondii HOM05D004580 ORTHO05D005917 5.5e-110 401.7 283 68.2
EL10Ac9g22979 Beta vulgaris HOM05D004580 ORTHO05D005917 1.2e-109 400.6 288 68.4
PSO541G6503 Papaver somniferum HOM05D004580 ORTHO05D005917 2.7e-109 399.4 284 67.3
Psat7g188520 Pisum sativum HOM05D004580 ORTHO05D005917 2.7e-109 399.4 243 74.5
PGSC0003DMG402016396 Solanum tuberosum HOM05D004580 ORTHO05D005917 3.6e-109 399.1 281 66.5
MSTRG.2066 Avicennia marina HOM05D004580 ORTHO05D005917 1.0e-108 397.5 286 65.7
Hund08631 Selenicereus undatus HOM05D004580 ORTHO05D005917 1.4e-108 397.1 287 65.2
Rhsim09G0069400 Rhododendron simsii HOM05D004580 ORTHO05D005917 2.3e-108 396.4 293 66.9
Migut.E00684 Erythranthe guttata HOM05D004580 ORTHO05D005917 3.0e-108 396.0 286 66.1
Sc10g0006870 Simmondsia chinensis HOM05D004580 ORTHO05D005917 3.0e-108 396.0 286 65.4
Solyc01g008280.4 Solanum lycopersicum HOM05D004580 ORTHO05D005917 6.7e-108 394.8 281 66.5
PSO781G0322 Papaver somniferum HOM05D004580 ORTHO05D005917 8.8e-108 394.4 284 66.5
Ah.01g012710 Amaranthus hybridus HOM05D004580 ORTHO05D005917 1.5e-107 393.7 284 66.9
Sopen01g003800 Solanum pennellii HOM05D004580 ORTHO05D005917 2.0e-107 393.3 281 66.5
Lj3P847T35 Lonicera japonica HOM05D004580 ORTHO05D005917 2.6e-107 392.9 251 74.1
ATR0706G027 Amborella trichopoda HOM05D004580 ORTHO05D005917 1.7e-106 390.2 295 65.1
MSTRG.13678 Avicennia marina HOM05D004580 ORTHO05D005917 3.7e-106 389.0 286 66.1
AUR62017729 Chenopodium quinoa HOM05D004580 ORTHO05D005917 1.1e-105 387.5 288 65.3
PSO541G6453 Papaver somniferum HOM05D004580 ORTHO05D005917 1.8e-105 386.7 285 65.6
Lj3g0026440 Lotus japonicus HOM05D004580 ORTHO05D005917 3.1e-105 386.0 278 67.6
DCAR_002598 Daucus carota HOM05D004580 ORTHO05D005917 6.5e-103 378.3 286 63.6
SGA_v2.0_scaffold358G49840 Striga asiatica HOM05D004580 ORTHO05D005917 7.2e-102 374.8 275 65.5
DCAR_023183 Daucus carota HOM05D004580 ORTHO05D005917 9.4e-102 374.4 286 63.3
SEGI_24357 Sequoiadendron giganteum HOM05D004580 ORTHO05D005917 9.4e-102 374.4 277 64.3
HPP92_004278 Vanilla planifolia HOM05D004580 ORTHO05D005917 4.4e-99 365.5 284 62.3
MBI02_g02175_MAGBIO Magnolia biondii HOM05D004580 ORTHO05D005917 7.0e-97 358.2 265 64.5
SHI33348 Sapria himalayana HOM05D004580 ORTHO05D005917 6.5e-95 351.7 281 61.6
Os06g0219800 Oryza sativa ssp. japonica HOM05D004580 ORTHO05D005917 3.2e-94 349.4 290 59.0
AagrBONN_evm.TU.Sc2ySwM_117.2526 Anthoceros agrestis HOM05D004580 ORTHO05D005917 1.2e-93 347.4 294 57.1
HPP92_016361 Vanilla planifolia HOM05D004580 ORTHO05D005917 2.7e-93 346.3 285 58.6
Zm00001eb372770 Zea mays HOM05D004580 ORTHO05D005917 1.0e-92 344.4 289 58.8
Peaxi162Scf00021g02317 Petunia axillaris HOM05D004580 ORTHO05D005917 8.8e-92 341.3 281 60.1
Mapoly0004s0171 Marchantia polymorpha HOM05D004580 ORTHO05D005917 2.0e-91 340.1 276 59.1
Pp3c1_41950 Physcomitrium patens HOM05D004580 ORTHO05D005917 2.8e-90 336.3 295 55.9
Gorai.009G235200 Gossypium raimondii HOM05D004580 ORTHO05D005917 6.3e-90 335.1 266 61.3
Lalb_Chr19g0136591 Lupinus albus HOM05D004580 ORTHO05D005917 8.3e-90 334.7 239 66.9
Pp3c2_670 Physcomitrium patens HOM05D004580 ORTHO05D005917 1.6e-88 330.5 264 59.1
SMO329G0013 Selaginella moellendorffii HOM05D004580 ORTHO05D005917 3.8e-87 325.9 307 53.7
Gohir.D05G227500 Gossypium hirsutum HOM05D004580 ORTHO05D005917 2.8e-82 309.7 210 69.5
SEGI_19435 Sequoiadendron giganteum HOM05D004580 ORTHO05D005917 3.7e-82 309.3 273 56.0
Aqoxy6G00748 Aquilegia oxysepala HOM05D004580 ORTHO05D005917 4.5e-80 302.4 212 70.8
Gohir.A05G224950 Gossypium hirsutum HOM05D004580 ORTHO05D005917 3.3e-78 296.2 249 60.6
CBR_g45439 Chara braunii HOM05D004580 ORTHO05D005917 2.1e-77 293.5 281 52.3
TPR.G17228 Trifolium pratense HOM05D004580 ORTHO05D005917 4.7e-77 292.4 259 58.3
FAN02G1810 Fragaria x ananassa HOM05D004580 ORTHO05D005917 2.6e-75 286.6 143 93.7
CDE05G0498 Ceratophyllum demersum HOM05D004580 ORTHO05D005917 6.6e-71 271.9 204 60.3
Glyma.12G087751 Glycine max HOM05D004580 ORTHO05D005917 2.3e-68 263.5 148 83.1
FvH4_2g11953 Fragaria vesca HOM05D004580 ORTHO05D000007 3.0e-63 246.5 122 93.4
FAN24G1342 Fragaria x ananassa HOM05D004580 ORTHO05D005917 8.6e-63 245.0 122 92.6
unitig_8.g3592 Utricularia gibba HOM05D004580 ORTHO05D005917 1.1e-60 238.0 143 74.8
CAN.G282.45 Capsicum annuum HOM05D004580 ORTHO05D005917 4.6e-56 222.6 180 60.6
BraA09t38542Z Brassica rapa HOM05D004580 ORTHO05D005917 8.6e-55 218.4 163 68.1
A09p29790 Brassica napus HOM05D004580 ORTHO05D005917 8.1e-53 211.8 121 84.3
Oeu013193.1 Olea europaea HOM05D004580 ORTHO05D005917 8.4e-50 201.8 176 58.0
MCO01G633 Micromonas commoda HOM05D004580 ORTHO05D005917 2.4e-49 200.3 263 38.8
Cre13.g580650 Chlamydomonas reinhardtii HOM05D004580 ORTHO05D005917 3.2e-49 199.9 360 33.3
PRCOL_00005481 Prasinoderma coloniale HOM05D004580 ORTHO05D005917 1.1e-46 191.4 305 36.4
Cfa021829 Carpinus fangiana HOM05D004580 ORTHO05D011646 2.4e-41 173.7 267 35.6
Cfa014845 Carpinus fangiana HOM05D000016 ORTHO05D000725 1.3e-31 141.4 137 53.3
Nn5g29558 Nelumbo nucifera HOM05D004580 ORTHO05D005917 2.3e-31 140.6 121 59.5
Cfa001645 Carpinus fangiana HOM05D004580 ORTHO05D020348 1.0e-23 115.2 290 29.3
GSVIVG01009057001 Vitis vinifera HOM05D004580 ORTHO05D005917 2.3e-15 87.4 71 62.0
FAN24G1075 Fragaria x ananassa HOM05D004580 ORTHO05D005917 2.8e-13 80.5 41 90.2
FvH4_4g06652 Fragaria vesca HOM05D004580 ORTHO05D000031 1.4e-09 68.2 36 86.1


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