Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2017 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-54 216.1 107 100.0
FvH4_5g33281 Fragaria vesca HOM05D002813 ORTHO05D003203 8.6e-54 213.4 106 99.1
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 4.8e-20 101.3 101 52.5
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 8.1e-20 100.5 101 52.5
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-19 97.8 104 48.1
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-18 95.9 101 49.5
FvH4_6g10180 Fragaria vesca HOM05D004619 ORTHO05D003203 3.4e-18 95.1 102 52.0
FAN14G2999 Fragaria x ananassa HOM05D004619 ORTHO05D003203 3.4e-18 95.1 102 52.0
FAN05G5767 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.8e-18 94.4 101 49.5
FAN21G2418 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.9e-18 93.6 105 50.5
FAN21G3097 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.9e-18 93.6 105 50.5
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-17 93.2 103 51.5
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 1.9e-16 89.4 99 48.5
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 7.1e-16 87.4 104 47.1
FAN14G4635 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.3e-16 87.0 100 50.0
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-15 85.5 102 48.0
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-15 85.1 104 46.2
FAN20G2843 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-15 85.1 75 57.3
FAN02G3770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.9e-15 84.0 71 59.2
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 7.9e-15 84.0 74 56.8
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-14 83.6 99 46.5
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-14 83.2 106 46.2
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 1.3e-14 83.2 101 38.6
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 1.3e-14 83.2 101 48.5
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 3.9e-14 81.6 106 46.2
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 5.1e-14 81.3 99 45.5
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-14 81.3 71 57.7
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-14 81.3 99 45.5
FAN27G2003 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-14 81.3 99 48.5
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 5.1e-14 81.3 101 41.6
FAN02G3428 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.7e-14 80.9 100 48.0
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 8.7e-14 80.5 71 56.3
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.7e-14 80.5 104 43.3
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.7e-14 80.5 106 46.2
RcHm_v2.0_Chr3g0468781 Rosa chinensis HOM05D002813 ORTHO05D003203 8.7e-14 80.5 72 55.6
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-13 80.1 71 56.3
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 1.1e-13 80.1 98 45.9
FAN04G3253 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-13 79.7 106 45.3
FAN18G3306 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-13 79.0 104 42.3
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-13 78.6 92 48.9
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 5.6e-13 77.8 92 46.7
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-13 77.8 92 46.7
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 7.4e-13 77.4 104 41.3
FAN02G0699 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.4e-13 77.4 104 41.3
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.4e-13 77.4 104 41.3
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.4e-13 77.4 104 41.3
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.4e-13 77.4 104 41.3
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.4e-13 77.4 104 41.3
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-12 76.6 102 41.2
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-12 76.3 108 40.7
FAN25G0311 Fragaria x ananassa HOM05D000808 ORTHO05D000863 2.1e-12 75.9 108 40.7
FAN25G3517 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-12 75.9 102 45.1
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-12 75.5 108 39.8
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-12 75.1 100 44.0
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-12 75.1 101 41.6
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-12 75.1 108 41.7
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-12 75.1 100 43.0
FvH4_6g06400 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-12 75.1 74 50.0
FvH4_7g18342 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-12 75.1 105 40.0
FAN02G4209 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-12 75.1 104 40.4
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 3.7e-12 75.1 105 40.0
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-12 75.1 96 41.7
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-12 75.1 101 41.6
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 4.8e-12 74.7 75 50.7
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-12 74.7 75 50.7
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 4.8e-12 74.7 101 38.6
Dinv27902 Davidia involucrata HOM05D002813 ORTHO05D003203 6.2e-12 74.3 97 44.3
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 6.2e-12 74.3 102 40.2
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-12 74.3 102 40.2
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-12 74.3 96 42.7
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-12 74.3 107 41.1
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.2e-12 73.9 75 50.7
FAN09G4302 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.2e-12 73.9 75 50.7
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.2e-12 73.9 101 45.5
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.2e-12 73.9 101 45.5
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.2e-12 73.9 102 40.2
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 1.1e-11 73.6 101 40.6
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-11 73.6 107 42.1
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-11 73.6 96 42.7
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-11 73.6 96 42.7
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-11 73.6 96 42.7
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-11 73.2 94 43.6
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-11 73.2 102 43.1
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-11 72.4 102 39.2
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 3.1e-11 72.0 102 43.1
FAN02G4625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.0e-11 71.6 75 49.3
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 4.0e-11 71.6 101 36.6
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 5.3e-11 71.2 99 38.4
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-11 71.2 102 42.2
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-11 71.2 101 41.6
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-11 71.2 102 42.2
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 6.9e-11 70.9 102 40.2
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 6.9e-11 70.9 102 38.2
FAN16G2005 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.0e-11 70.5 74 47.3
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 1.2e-10 70.1 101 35.6
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 1.5e-10 69.7 101 37.6
FvH4_5g12190 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-10 69.7 101 40.6
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-10 69.7 101 40.6
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 1.5e-10 69.7 100 36.0
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 2.6e-10 68.9 101 34.7
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 2.6e-10 68.9 97 38.1
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 2.6e-10 68.9 100 34.0
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 3.4e-10 68.6 99 40.4
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 3.4e-10 68.6 97 44.3
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 3.4e-10 68.6 104 46.2
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.4e-10 68.6 104 46.2
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.4e-10 68.6 104 46.2
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 3.4e-10 68.6 99 39.4
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 4.5e-10 68.2 101 37.6
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.6e-10 67.4 101 41.6
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 7.6e-10 67.4 93 44.1
FvH4_3g21760 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-09 67.0 74 45.9
FAN11G3977 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-09 67.0 74 45.9
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-09 67.0 104 45.2
FAN02G0224 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-09 66.6 79 48.1
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-09 66.6 101 41.6
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 1.3e-09 66.6 117 38.5
FvH4_5g09361 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-09 66.2 117 38.5
FAN04G1304 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-09 66.2 74 48.6
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 1.7e-09 66.2 101 34.7
FvH4_5g19260 Fragaria vesca HOM05D002813 ORTHO05D003203 2.2e-09 65.9 74 47.3
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-09 65.5 101 39.6
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 2.9e-09 65.5 102 32.4
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 3.8e-09 65.1 97 35.1
FvH4_3g11280 Fragaria vesca HOM05D002813 ORTHO05D003203 4.9e-09 64.7 115 39.1
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 4.9e-09 64.7 95 34.7
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 6.5e-09 64.3 101 35.6
CAN.G400.3 Capsicum annuum HOM05D002813 ORTHO05D003203 8.4e-09 63.9 99 36.4
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 8.4e-09 63.9 98 41.8
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 8.4e-09 63.9 101 35.6
FAN05G3268 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-08 63.5 66 48.5
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-08 63.5 74 45.9
FAN18G2831 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-08 63.5 74 45.9
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 1.4e-08 63.2 101 34.7
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 1.9e-08 62.8 101 36.6
CAN.G953.3 Capsicum annuum HOM05D002813 ORTHO05D003203 2.5e-08 62.4 99 37.4
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 2.5e-08 62.4 99 39.4
FAN18G1460 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-08 62.0 100 39.0
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 5.5e-08 61.2 102 36.3
FAN09G1205 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.1e-08 60.8 55 58.2
Peaxi162Scf00227g00722 Petunia axillaris HOM05D002813 ORTHO05D003203 3.5e-07 58.5 88 33.0
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 6.0e-07 57.8 102 32.4
FAN18G1397 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-06 57.0 96 43.8
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-06 56.2 104 34.6
FvH4_5g12191 Fragaria vesca HOM05D002813 ORTHO05D003203 2.3e-06 55.8 77 44.2
FAN28G0547 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-06 55.8 67 43.3
RcHm_v2.0_Chr5g0073461 Rosa chinensis HOM05D002813 ORTHO05D003203 2.3e-06 55.8 66 40.9
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 2.3e-06 55.8 97 37.1
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 3.0e-06 55.5 78 41.0
FAN14G0433 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-06 55.5 50 50.0
FAN18G0728 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-06 55.5 69 42.0
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 3.0e-06 55.5 97 32.0
SEGI_23038 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 3.9e-06 55.1 94 31.9
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 5.1e-06 54.7 101 33.7
PGSC0003DMG400010583 Solanum tuberosum HOM05D002813 ORTHO05D003203 5.1e-06 54.7 85 34.1
FvH4_5g12211 Fragaria vesca HOM05D002813 ORTHO05D003203 6.7e-06 54.3 69 40.6
FAN20G1057 Fragaria x ananassa HOM05D002813 ORTHO05D000003 6.7e-06 54.3 90 37.8
FAN21G2238 Fragaria x ananassa HOM05D000437 ORTHO05D003203 8.7e-06 53.9 60 43.3


User provided reference genes

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