Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.1e-140 503.4 282 100.0
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.2e-107 393.7 270 81.5
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.3e-97 359.0 282 73.0
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.5e-92 342.8 251 77.7
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 4.2e-92 342.0 236 80.9
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 4.7e-91 338.6 236 80.5
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 1.0e-74 284.3 236 69.1
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 3.1e-58 229.6 234 62.8
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 1.5e-57 227.3 235 60.4
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 6.8e-50 201.8 232 50.4
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 1.3e-48 197.6 234 53.8
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 1.3e-48 197.6 234 51.3
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 7.8e-46 188.3 226 56.6
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 1.9e-44 183.7 231 48.9
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 3.3e-44 183.0 227 48.5
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 5.6e-44 182.2 232 48.3
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 3.6e-43 179.5 231 48.9
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 4.7e-43 179.1 234 45.7
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 8.1e-43 178.3 237 53.6
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 1.4e-42 177.6 234 43.2
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 5.2e-42 175.6 247 42.5
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 5.2e-42 175.6 234 43.6
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 2.0e-41 173.7 234 50.9
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 7.6e-41 171.8 228 52.6
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 6.4e-40 168.7 231 51.5
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 6.4e-40 168.7 231 52.4
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 1.4e-39 167.5 228 51.8
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 7.1e-39 165.2 276 40.2
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 2.7e-38 163.3 231 42.0
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 2.7e-38 163.3 228 52.2
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 7.8e-38 161.8 234 50.9
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 1.3e-37 161.0 234 42.7
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 3.3e-36 156.4 234 41.9
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 4.3e-36 156.0 227 42.3
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 1.1e-34 151.4 200 47.5
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 6.9e-34 148.7 230 47.8
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 1.2e-33 147.9 227 40.1
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 5.8e-33 145.6 199 52.8
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 1.9e-31 140.6 200 45.0
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 2.4e-31 140.2 231 39.4
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 5.4e-31 139.0 203 43.8
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 9.3e-31 138.3 199 43.7
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 1.2e-30 137.9 204 43.1
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 4.6e-30 136.0 199 43.7
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 4.6e-30 136.0 199 43.7
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 6.0e-30 135.6 223 41.7
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 1.7e-29 134.0 231 38.1
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 4.3e-28 129.4 208 49.0
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 1.6e-27 127.5 199 42.2
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 2.1e-27 127.1 207 47.8
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 2.8e-27 126.7 205 40.5
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 3.1e-26 123.2 196 49.5
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 3.1e-26 123.2 196 49.5
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 6.9e-26 122.1 196 39.8
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 1.2e-25 121.3 197 40.6
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 1.2e-25 121.3 196 39.8
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 2.0e-25 120.6 196 40.3
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 3.4e-25 119.8 196 47.4
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 3.4e-25 119.8 196 47.4
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 3.4e-25 119.8 196 47.4
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 3.4e-25 119.8 205 37.6
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 5.8e-25 119.0 196 46.4
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 9.9e-25 118.2 196 40.8
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 1.3e-24 117.9 238 35.7
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 1.7e-24 117.5 196 45.9
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 1.7e-24 117.5 199 37.2
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 1.1e-23 114.8 234 39.7
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 1.1e-23 114.8 196 46.9
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.4e-23 114.4 196 42.3
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 4.2e-23 112.8 131 48.1
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 3.9e-21 106.3 233 35.2
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 1.3e-19 101.3 313 34.8
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 9.0e-18 95.1 94 51.1
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 9.0e-18 95.1 94 51.1
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 1.1e-15 88.2 104 48.1
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 5.5e-15 85.9 230 31.3
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 8.7e-13 78.6 228 34.2
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 1.6e-11 74.3 136 39.7
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 1.6e-11 74.3 132 37.9
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 2.1e-11 73.9 136 36.8
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.5e-09 67.8 133 49.6
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 5.9e-09 65.9 135 34.1
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 2.9e-08 63.5 100 49.0
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 8.4e-08 62.0 103 38.8
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 8.4e-08 62.0 103 38.8
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 1.6e-06 57.8 134 32.8


User provided reference genes

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