Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.2e-82 310.5 249 100.0
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 6.0e-82 308.1 249 99.6
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 4.9e-76 288.5 250 96.0
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 9.2e-75 284.3 250 95.2
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.3e-73 279.6 251 94.0
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 2.0e-69 266.5 250 89.6
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.6e-56 221.9 198 98.5
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 4.6e-50 202.2 252 77.8
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 3.4e-37 159.5 236 72.5
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 7.6e-37 158.3 255 69.0
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 6.5e-36 155.2 229 72.1
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 1.4e-35 154.1 236 69.5
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.9e-35 153.7 243 68.3
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 2.5e-35 153.3 236 69.9
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 4.2e-35 152.5 234 70.9
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 2.7e-34 149.8 234 70.1
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 4.6e-34 149.1 244 67.6
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 6.1e-34 148.7 248 68.5
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.8e-33 147.1 239 67.8
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 3.0e-33 146.4 256 66.8
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 6.7e-33 145.2 229 69.9
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 5.7e-32 142.1 237 68.8
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 5.7e-32 142.1 235 66.4
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 1.3e-31 141.0 234 68.4
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 2.2e-31 140.2 234 69.2
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 4.8e-31 139.0 231 69.7
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 8.2e-31 138.3 238 68.5
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 8.2e-31 138.3 252 65.1
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 3.1e-30 136.3 233 67.0
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 3.1e-30 136.3 253 63.6
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 1.5e-29 134.0 239 66.5
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 3.4e-29 132.9 237 53.6
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 7.7e-29 131.7 238 66.4
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 1.7e-28 130.6 234 64.5
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 2.2e-28 130.2 254 63.4
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 2.9e-28 129.8 254 63.8
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 3.8e-28 129.4 252 65.1
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 5.0e-28 129.0 232 65.9
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 5.0e-28 129.0 232 65.9
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 5.0e-28 129.0 237 65.8
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 1.4e-27 127.5 234 66.2
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 2.5e-27 126.7 238 66.4
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 3.2e-27 126.3 237 66.2
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 3.2e-27 126.3 253 63.2
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 4.2e-27 125.9 232 65.5
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 4.2e-27 125.9 232 65.5
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 5.5e-27 125.6 260 62.7
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 5.5e-27 125.6 245 61.6
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 9.4e-27 124.8 242 63.2
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 1.2e-26 124.4 256 60.2
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 2.7e-26 123.2 260 60.8
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 3.6e-26 122.9 239 52.7
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 3.6e-26 122.9 233 63.9
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 4.7e-26 122.5 231 65.4
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 6.1e-26 122.1 237 63.3
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 7.9e-26 121.7 237 62.0
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 7.9e-26 121.7 242 63.2
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 1.0e-25 121.3 233 64.8
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 1.4e-25 120.9 231 63.2
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 1.4e-25 120.9 237 64.6
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.4e-25 120.9 233 63.9
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.4e-25 120.9 233 63.5
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 1.4e-25 120.9 237 62.9
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 3.0e-25 119.8 243 63.0
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 3.9e-25 119.4 235 61.7
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 3.9e-25 119.4 163 84.0
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 5.1e-25 119.0 206 69.4
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 1.1e-24 117.9 233 63.9
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 1.1e-24 117.9 241 63.1
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 1.1e-24 117.9 271 57.2
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 1.5e-24 117.5 252 61.1
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 2.6e-24 116.7 68 79.4
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 2.6e-24 116.7 290 55.2
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 3.3e-24 116.3 235 65.1
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 1.7e-23 114.0 254 61.0
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 2.8e-23 113.2 181 75.1
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 3.7e-23 112.8 252 62.7
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 6.3e-23 112.1 237 59.1
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 1.1e-22 111.3 67 77.6
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 1.4e-22 110.9 260 58.5
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 1.4e-22 110.9 260 58.5
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 1.4e-22 110.9 182 74.2
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 4.1e-22 109.4 231 62.8
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 5.3e-22 109.0 225 65.8
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 9.1e-22 108.2 68 75.0
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 2.6e-21 106.7 234 63.7
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 5.9e-21 105.5 200 70.5
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 1.0e-20 104.8 200 69.5
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 1.3e-20 104.4 206 65.5
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.2e-20 103.6 193 53.9
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 5.0e-20 102.4 202 70.3
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 8.5e-20 101.7 243 58.0
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 2.1e-18 97.1 232 57.8
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 2.7e-18 96.7 234 61.5
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 6.1e-18 95.5 233 61.8
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 2.3e-17 93.6 68 63.2
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 5.2e-17 92.4 58 70.7
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 2.0e-16 90.5 68 67.6
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 2.0e-16 90.5 68 60.3
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 1.7e-15 87.4 68 66.2
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 8.2e-15 85.1 203 66.0
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 1.1e-14 84.7 292 51.4
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 1.1e-14 84.7 249 54.6
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.7e-12 77.4 46 78.3
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.7e-12 77.4 203 32.5
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 5.0e-12 75.9 263 53.6
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.5e-11 74.3 198 50.5
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 3.2e-11 73.2 223 57.8
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 5.5e-11 72.4 66 48.5
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 3.6e-10 69.7 260 55.0
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 8.0e-10 68.6 195 43.6
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 3.0e-09 66.6 45 66.7
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 5.2e-09 65.9 268 52.2
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 1.2e-08 64.7 103 47.6
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.7e-07 59.7 34 73.5
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 3.7e-07 59.7 193 58.5
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.1e-06 56.6 36 72.2
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 5.3e-06 55.8 36 72.2


User provided reference genes

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