Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 9.4e-153 543.5 276 100.0
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.0e-151 540.0 276 99.3
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.6e-144 516.2 279 95.7
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 2.1e-144 515.8 276 96.4
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 3.8e-138 495.0 279 92.8
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 4.5e-115 418.3 279 78.1
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 1.8e-63 246.9 282 53.9
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 4.2e-60 235.7 208 60.6
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 7.9e-43 178.3 219 45.7
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 5.9e-38 162.2 272 37.9
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 1.0e-37 161.4 272 37.9
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 1.0e-37 161.4 353 33.7
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 1.3e-37 161.0 350 34.0
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 1.4e-36 157.5 163 48.5
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 4.7e-35 152.5 320 34.1
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 1.4e-34 151.0 327 33.3
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 4.4e-33 146.0 164 47.6
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 7.0e-31 138.7 167 41.9
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 5.9e-30 135.6 305 32.8
THA.LOC104817467 Tarenaya hassleriana HOM05D012658 ORTHO05D010583 1.3e-29 134.4 238 38.7
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 2.9e-29 133.3 240 36.7
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 3.8e-29 132.9 171 39.8
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 5.0e-29 132.5 183 40.4
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 2.5e-28 130.2 164 41.5
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 3.2e-28 129.8 298 32.9
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 3.6e-27 126.3 237 36.3
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 1.5e-25 120.9 161 39.8
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 7.4e-25 118.6 184 34.8
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 1.4e-23 114.4 172 38.4
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 5.3e-23 112.5 218 36.2
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 1.6e-22 110.9 173 36.4
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 4.5e-22 109.4 144 38.9
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 7.7e-22 108.6 183 34.4
BraA09t40861Z Brassica rapa HOM05D012658 ORTHO05D010583 3.8e-21 106.3 180 35.6
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 6.5e-21 105.5 292 29.8
Thhalv10006051m.g Eutrema salsugineum HOM05D012658 ORTHO05D010583 1.9e-20 104.0 227 30.4
A09p54480 Brassica napus HOM05D012658 ORTHO05D010583 2.5e-20 103.6 180 35.6
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 3.2e-20 103.2 128 41.4
GSVIVG01028089001 Vitis vinifera HOM05D008757 ORTHO05D010583 3.2e-20 103.2 248 35.1
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 1.2e-19 101.3 217 34.6
BcaC07g40736 Brassica carinata HOM05D012658 ORTHO05D010583 1.6e-19 100.9 180 35.0
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 2.1e-19 100.5 165 34.5
AL5G45370 Arabidopsis lyrata HOM05D012658 ORTHO05D010583 2.7e-19 100.1 220 32.3
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 8.0e-19 98.6 311 30.2
BolC8t51315H Brassica oleracea HOM05D012658 ORTHO05D010583 1.0e-18 98.2 128 39.8
C08p37370 Brassica napus HOM05D012658 ORTHO05D010583 2.0e-17 94.0 128 39.1
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 1.3e-16 91.3 302 29.5
A05p34600 Brassica napus HOM05D012658 ORTHO05D010583 3.7e-16 89.7 130 39.2
Thecc.01G310700 Theobroma cacao HOM05D008757 ORTHO05D010583 2.4e-15 87.0 109 45.0
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 4.1e-15 86.3 179 29.1
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 7.0e-15 85.5 129 32.6
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 5.9e-14 82.4 316 26.3
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 1.7e-13 80.9 301 27.2
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 7.2e-12 75.5 88 40.9
PGR119G0138 Punica granatum HOM05D008757 ORTHO05D010583 9.4e-12 75.1 250 31.2
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 2.0e-09 67.4 232 25.0


User provided reference genes

Program Settings