Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G1397 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-65 253.1 124 100.0
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 5.6e-65 250.8 124 99.2
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-65 250.8 124 99.2
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-64 248.1 124 97.6
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-64 247.3 124 97.6
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-28 129.4 118 56.8
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 5.5e-28 127.9 118 55.9
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-28 127.9 118 55.9
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-28 127.9 118 55.9
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-28 127.5 118 55.9
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 9.1e-23 110.5 118 57.6
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-22 110.2 118 57.6
FvH4_5g12190 Fragaria vesca HOM05D002813 ORTHO05D003203 3.5e-22 108.6 118 55.1
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-22 108.6 118 55.1
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-22 107.8 120 56.7
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.8e-21 105.1 118 53.4
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.8e-21 105.1 113 53.1
FAN18G3306 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-20 102.8 113 52.2
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 7.2e-20 100.9 54 90.7
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 9.4e-20 100.5 120 48.3
FAN04G0910 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-18 95.5 118 51.7
FvH4_5g12211 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-17 93.6 86 58.1
FAN18G1460 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-17 92.8 115 52.2
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 3.4e-17 92.0 118 51.7
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 2.4e-15 85.9 86 54.7
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 1.2e-14 83.6 100 50.0
FvH4_7g18342 Fragaria vesca HOM05D002813 ORTHO05D003203 4.5e-14 81.6 105 49.5
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 4.5e-14 81.6 105 49.5
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 5.9e-14 81.3 86 53.5
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 2.2e-13 79.3 95 51.6
FAN04G3253 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-13 79.0 119 46.2
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-13 79.0 122 47.5
Dinv27902 Davidia involucrata HOM05D002813 ORTHO05D003203 5.0e-13 78.2 86 48.8
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 6.5e-13 77.8 89 52.8
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.5e-13 77.4 122 46.7
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 8.5e-13 77.4 106 44.3
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 8.5e-13 77.4 97 44.3
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 8.5e-13 77.4 97 46.4
RcHm_v2.0_Chr5g0073461 Rosa chinensis HOM05D002813 ORTHO05D003203 8.5e-13 77.4 101 45.5
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-12 77.0 122 46.7
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-12 76.3 86 50.0
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-12 75.9 85 49.4
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 3.2e-12 75.5 89 49.4
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-12 75.5 95 47.4
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 4.2e-12 75.1 108 41.7
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-12 75.1 86 50.0
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 4.2e-12 75.1 97 43.3
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 5.5e-12 74.7 97 42.3
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 7.2e-12 74.3 85 49.4
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-12 74.3 85 51.8
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-12 74.3 85 49.4
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 7.2e-12 74.3 86 46.5
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 9.4e-12 73.9 86 45.3
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 9.4e-12 73.9 86 50.0
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 9.4e-12 73.9 99 48.5
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.4e-12 73.9 85 52.9
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-11 73.6 86 48.8
FAN05G5767 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-11 73.6 95 47.4
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-11 73.2 85 50.6
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 1.6e-11 73.2 96 43.8
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 4.7e-11 71.6 98 41.8
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 6.1e-11 71.2 123 43.9
CAN.G400.3 Capsicum annuum HOM05D002813 ORTHO05D003203 8.0e-11 70.9 97 40.2
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 8.0e-11 70.9 98 45.9
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-10 70.5 85 48.2
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-10 70.5 94 46.8
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-10 70.5 85 48.2
FAN02G4209 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-10 70.1 129 45.0
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-10 70.1 125 44.8
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 1.4e-10 70.1 94 51.1
FAN18G0728 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-10 69.7 75 56.0
FAN02G0699 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-10 69.3 125 44.0
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-10 69.3 125 44.0
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-10 69.3 125 44.0
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-10 69.3 125 44.0
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-10 68.9 85 47.1
FAN25G0311 Fragaria x ananassa HOM05D000808 ORTHO05D000863 3.0e-10 68.9 125 43.2
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 4.0e-10 68.6 125 43.2
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.0e-10 68.6 123 43.1
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.0e-10 68.6 85 47.1
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-10 68.2 85 49.4
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 5.2e-10 68.2 84 46.4
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-10 67.8 100 46.0
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-09 67.0 85 48.2
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-09 67.0 100 46.0
FvH4_3g11280 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-09 67.0 129 43.4
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-09 67.0 100 46.0
PGSC0003DMG400010583 Solanum tuberosum HOM05D002813 ORTHO05D003203 1.2e-09 67.0 90 41.1
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-09 66.6 88 52.3
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.0e-09 66.2 86 43.0
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.0e-09 66.2 86 43.0
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 2.0e-09 66.2 86 44.2
CAN.G953.3 Capsicum annuum HOM05D002813 ORTHO05D003203 3.4e-09 65.5 97 37.1
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 3.4e-09 65.5 86 41.9
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 3.4e-09 65.5 85 48.2
HanXRQChr12g0371741 Helianthus annuus HOM05D002813 ORTHO05D003203 3.4e-09 65.5 85 37.6
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 3.4e-09 65.5 86 43.0
RcHm_v2.0_Chr3g0468781 Rosa chinensis HOM05D002813 ORTHO05D003203 4.4e-09 65.1 81 50.6
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 5.7e-09 64.7 89 49.4
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 7.5e-09 64.3 86 41.9
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.8e-09 63.9 90 48.9
HanXRQChr12g0371761 Helianthus annuus HOM05D002813 ORTHO05D003203 9.8e-09 63.9 85 36.5
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-08 63.5 120 41.7
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-08 63.5 87 51.7
Peaxi162Scf00227g00722 Petunia axillaris HOM05D002813 ORTHO05D003203 1.3e-08 63.5 76 46.1
FAN14G4635 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-08 63.2 87 47.1
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 2.2e-08 62.8 86 37.2
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 2.8e-08 62.4 85 40.0
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 2.8e-08 62.4 92 51.1
FvH4_6g10180 Fragaria vesca HOM05D004619 ORTHO05D003203 2.8e-08 62.4 100 45.0
FAN13G0265 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-08 62.4 87 50.6
FAN14G2999 Fragaria x ananassa HOM05D004619 ORTHO05D003203 2.8e-08 62.4 100 45.0
SEGI_23038 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 2.8e-08 62.4 84 38.1
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 2.8e-08 62.4 97 40.2
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-08 62.0 99 48.5
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 3.7e-08 62.0 98 39.8
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 3.7e-08 62.0 86 33.7
ECA248G1211 Erigeron canadensis HOM05D002813 ORTHO05D003203 4.9e-08 61.6 84 36.9
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 4.9e-08 61.6 90 47.8
FAN02G3428 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.3e-08 60.8 87 50.6
HanXRQChr12g0371751 Helianthus annuus HOM05D002813 ORTHO05D003203 8.3e-08 60.8 85 34.1
HanXRQChr12g0371771 Helianthus annuus HOM05D002813 ORTHO05D003203 8.3e-08 60.8 85 34.1
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 8.3e-08 60.8 84 38.1
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 1.1e-07 60.5 86 38.4
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 1.8e-07 59.7 86 38.4
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-07 59.3 85 45.9
FAN27G2003 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-07 59.3 99 44.4
TWI63G1080 Tripterygium wilfordii HOM05D002813 ORTHO05D003203 7.0e-07 57.8 87 42.5
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 9.2e-07 57.4 119 31.9
FAN18G2398 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.2e-07 57.4 64 50.0
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 1.2e-06 57.0 134 36.6
FAN21G2238 Fragaria x ananassa HOM05D000437 ORTHO05D003203 1.2e-06 57.0 55 58.2
FAN18G2017 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-06 56.6 96 43.8
FAN21G0006 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-06 56.2 91 47.3
FvH4_5g12191 Fragaria vesca HOM05D002813 ORTHO05D003203 2.7e-06 55.8 65 55.4
RcHm_v2.0_Chr7g0185381 Rosa chinensis HOM05D002813 ORTHO05D003203 3.5e-06 55.5 54 59.3
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 5.9e-06 54.7 70 44.3


User provided reference genes

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