Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G1258 Fragaria x ananassa HOM05D011367 ORTHO05D001590 0.0e+00 1243.4 630 100.0
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 9.9e-283 976.5 633 83.3
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 7.6e-267 923.7 638 78.2
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 5.1e-255 884.4 633 77.1
FvH4_2g35252 Fragaria vesca HOM05D011367 ORTHO05D001590 1.2e-232 810.1 589 75.0
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.6e-230 802.4 570 79.5
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 6.3e-229 797.7 613 73.9
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 2.7e-187 659.4 398 88.7
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.4e-143 513.5 366 76.2
FAN05G0144 Fragaria x ananassa HOM05D011367 ORTHO05D001590 8.8e-122 441.8 281 81.1
FvH4_5g28462 Fragaria vesca HOM05D011367 ORTHO05D001590 3.5e-70 270.4 162 90.1
FAN05G1235 Fragaria x ananassa HOM05D011367 ORTHO05D001590 4.0e-66 256.9 199 69.3
FAN27G0336 Fragaria x ananassa HOM05D011367 ORTHO05D001590 5.8e-41 173.3 154 59.7
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 1.5e-36 158.7 397 28.7
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 8.1e-35 152.9 320 29.7
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-34 152.5 300 30.3
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.8e-34 151.8 406 28.3
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.0e-34 149.4 407 28.3
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 2.0e-33 148.3 417 26.9
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 2.6e-33 147.9 407 28.3
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 3.4e-33 147.5 690 23.0
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 6.4e-32 143.3 678 22.6
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 1.6e-30 138.7 292 29.8
RcHm_v2.0_Chr5g0050991 Rosa chinensis HOM05D011367 ORTHO05D001590 1.6e-30 138.7 225 41.8
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 6.0e-30 136.7 677 24.5
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 6.7e-29 133.3 683 23.1
FAN04G0718 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.5e-28 131.3 400 27.0
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 2.4e-26 124.8 228 33.3
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 9.0e-26 122.9 278 27.3
MD14G1121200 Malus domestica HOM05D001313 ORTHO05D001590 2.9e-24 117.9 224 32.1
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.6e-22 112.1 272 28.7
FAN05G1425 Fragaria x ananassa HOM05D011367 ORTHO05D001590 5.7e-20 103.6 71 78.9
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 7.4e-20 103.2 727 21.7
FvH4_2g09801 Fragaria vesca HOM05D012588 ORTHO05D001590 1.6e-19 102.1 285 26.3
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.8e-19 101.3 268 25.0
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.3e-19 100.1 268 25.0
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 1.1e-18 99.4 302 26.2
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.8e-18 98.6 328 24.4
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.8e-18 98.6 255 26.7
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-18 98.2 277 25.6
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.1e-18 97.8 328 24.4
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.3e-18 97.1 261 24.9
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.3e-18 97.1 277 25.6
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 5.3e-18 97.1 284 26.8
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-17 95.5 350 26.3
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-17 94.7 350 26.3
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.5e-17 94.0 268 23.9
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.6e-17 93.2 314 25.8
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-16 92.8 277 25.6
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-16 92.8 277 25.6
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-16 92.0 277 25.6
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.2e-16 91.7 332 24.4
FvH4_2g01890 Fragaria vesca HOM05D001313 ORTHO05D001590 2.9e-16 91.3 633 22.0
FAN16G2686 Fragaria x ananassa HOM05D001313 ORTHO05D001590 5.0e-16 90.5 702 19.1
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.0e-16 90.5 263 26.2
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-15 87.0 162 32.1
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-15 87.0 162 32.1
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-15 87.0 162 32.1
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-15 87.0 162 32.1
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-15 87.0 162 32.1
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-15 87.0 162 32.1
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-15 87.0 162 32.1
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.3e-15 86.3 442 21.5
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 9.3e-15 86.3 305 23.9
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.2e-14 85.9 162 31.5
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-14 85.5 195 27.7
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-14 85.1 342 25.1
FAN15G3309 Fragaria x ananassa HOM05D012588 ORTHO05D001590 2.7e-14 84.7 370 23.5
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 3.6e-14 84.3 430 22.1
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.9e-14 83.2 265 24.5
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-13 82.8 160 32.5
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-13 82.4 453 24.7
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.8e-13 82.0 311 23.5
FAN18G2573 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.8e-13 82.0 417 21.8
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.8e-13 82.0 201 25.9
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.9e-13 80.9 228 26.3
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-13 80.9 186 28.0
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 5.1e-13 80.5 317 22.7
FvH4_6g33380 Fragaria vesca HOM05D001313 ORTHO05D001590 8.7e-13 79.7 283 23.0
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.7e-13 79.7 453 24.3
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-12 79.3 453 24.3
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-12 79.3 453 24.3
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.5e-12 78.2 253 24.9
RcHm_v2.0_Chr5g0041501 Rosa chinensis HOM05D001313 ORTHO05D001590 2.5e-12 78.2 325 21.8
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 3.3e-12 77.8 181 27.6
FAN21G2565 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.3e-12 77.8 411 20.9
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.3e-12 77.4 226 25.7
FAN28G1211 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.3e-12 77.4 423 21.5
FAN02G0597 Fragaria x ananassa HOM05D001313 ORTHO05D001590 5.7e-12 77.0 410 21.0
FAN07G1365 Fragaria x ananassa HOM05D001313 ORTHO05D001590 7.4e-12 76.6 410 20.7
FAN22G1831 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.7e-12 76.3 410 20.7
FAN19G2309 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.6e-11 75.5 395 20.3
FvH4_3g31130 Fragaria vesca HOM05D001313 ORTHO05D001590 2.2e-11 75.1 665 20.9
RcHm_v2.0_Chr5g0033751 Rosa chinensis HOM05D011367 ORTHO05D050732 2.2e-11 75.1 57 59.6
FAN11G1661 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.8e-11 74.7 410 20.7
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.3e-11 73.6 171 25.7
FAN12G3449 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.3e-11 73.6 408 19.9
FAN19G0965 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.2e-11 73.2 739 18.3
FvH4_1g29720 Fragaria vesca HOM05D001313 ORTHO05D001590 1.4e-10 72.4 651 21.8
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 1.4e-10 72.4 160 29.4
RcHm_v2.0_Chr5g0012151 Rosa chinensis HOM05D011367 ORTHO05D050732 1.4e-10 72.4 59 57.6
FAN09G0894 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.8e-10 72.0 656 20.0
PSO384G1968 Papaver somniferum HOM05D020661 ORTHO05D010137 3.1e-10 71.2 286 25.2
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.1e-10 70.9 253 24.1
FAN18G1449 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.1e-10 70.9 284 25.0
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 5.3e-10 70.5 182 26.4
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 9.1e-10 69.7 173 26.6
FAN04G0896 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.1e-10 69.7 404 20.3
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.1e-10 69.7 269 23.0
FvH4_3g44640 Fragaria vesca HOM05D001313 ORTHO05D001590 2.0e-09 68.6 293 23.2
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 2.6e-09 68.2 207 27.5
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.5e-09 67.4 237 22.4
FvH4_6g20108 Fragaria vesca HOM05D023564 ORTHO05D001590 5.9e-09 67.0 229 24.9
vmacro04432 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 5.9e-09 67.0 199 25.6
vmacro21208 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 5.9e-09 67.0 214 26.2
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 1.0e-08 66.2 163 27.0
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-08 65.5 114 34.2
FvH4_3g30870 Fragaria vesca HOM05D001313 ORTHO05D001590 2.9e-08 64.7 379 22.2
PSO832G2750 Papaver somniferum HOM05D020661 ORTHO05D010137 3.8e-08 64.3 294 22.4
FAN19G1587 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.5e-08 63.2 654 18.0
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.1e-07 62.8 171 24.0
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-07 62.4 180 25.0
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-07 62.4 178 25.8
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.9e-07 62.0 278 23.7
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.5e-07 61.6 360 23.1
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 3.2e-07 61.2 191 25.1
Aqoxy3G02580 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 4.2e-07 60.8 300 23.7
Lj5A81T86 Lonicera japonica HOM05D008484 ORTHO05D007523 7.2e-07 60.1 168 25.6
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.6e-06 58.9 232 22.4
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.1e-06 58.5 264 23.9
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.6e-06 57.8 171 23.4
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.1e-06 57.0 143 28.7


User provided reference genes

Program Settings