Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G1209 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.7e-160 567.8 281 100.0
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 1.3e-101 373.6 282 73.0
FAN25G0074 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.7e-70 268.1 302 50.0
FAN23G1644 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-69 267.7 338 48.5
FAN26G0220 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.9e-69 266.2 337 47.2
FAN06G5011 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.8e-69 265.8 338 47.6
FAN13G3053 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.0e-69 265.4 254 59.8
FAN09G1485 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.2e-68 262.7 338 48.2
FAN15G1902 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-67 260.4 339 47.2
FAN22G1509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.1e-67 258.5 302 48.3
FAN11G3668 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.0e-67 258.1 302 49.3
FAN28G0938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-66 257.7 321 47.4
FAN02G1343 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-66 257.3 338 47.0
FAN18G3922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.8e-66 255.0 302 49.0
FAN03G2236 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-65 253.8 338 46.7
FAN25G1938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.3e-64 248.1 338 45.9
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-61 240.0 327 45.9
FAN28G0569 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-58 228.8 338 43.5
FAN18G2748 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-54 216.1 271 50.9
FAN03G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-49 199.9 327 40.4
FAN16G2492 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-48 197.6 297 43.4
FAN12G0049 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.2e-47 193.0 284 44.7
FvH4_4g26661 Fragaria vesca HOM05D002480 ORTHO05D003145 7.0e-47 191.8 332 39.8
FAN12G2038 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-45 187.6 318 40.3
FvH4_5g24922 Fragaria vesca HOM05D002480 ORTHO05D003145 7.1e-39 165.2 269 40.9
FAN20G1631 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.3e-36 156.4 231 45.5
FAN05G4362 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-35 154.1 205 46.8
FAN10G2984 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.7e-35 152.5 268 39.9
FAN16G1534 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-34 149.1 146 52.7
FAN26G2394 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-33 146.7 154 48.1
FAN05G3149 Fragaria x ananassa HOM05D002959 ORTHO05D003237 2.4e-31 140.2 144 52.8
FvH4_5g05871 Fragaria vesca HOM05D002480 ORTHO05D003145 4.1e-31 139.4 320 30.0
FAN12G0307 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.1e-31 139.4 304 35.2
FAN21G2545 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-30 137.9 213 42.7
FAN09G0095 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.1e-29 132.5 145 47.6
FAN10G3390 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.1e-29 132.5 284 35.6
FAN08G0214 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.6e-28 129.0 287 34.5
FAN09G3469 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-27 127.1 264 35.2
FAN06G4257 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.6e-27 126.3 276 35.1
FvH4_4g13551 Fragaria vesca HOM05D002480 ORTHO05D003145 1.8e-26 124.0 303 29.4
FAN13G0804 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-26 122.1 283 36.0
FAN06G1359 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.0e-26 121.7 247 36.4
FvH4_7g00030 Fragaria vesca HOM05D002480 ORTHO05D003145 5.8e-25 119.0 271 33.2
FAN05G3618 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-24 117.9 285 28.8
FvH4_2g24951 Fragaria vesca HOM05D002480 ORTHO05D003145 7.1e-23 112.1 304 30.9
FAN14G5553 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.1e-23 112.1 300 29.3
FAN05G3376 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-22 110.5 285 29.5
FAN18G1129 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.8e-22 108.6 340 26.8
FvH4_4g05731 Fragaria vesca HOM05D002480 ORTHO05D003145 2.3e-21 107.1 156 37.2
FAN06G2358 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-21 107.1 118 46.6
FAN14G5134 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.0e-21 106.7 118 47.5
FvH4_1g22022 Fragaria vesca HOM05D002480 ORTHO05D003145 3.9e-21 106.3 304 30.3
FvH4_4g09962 Fragaria vesca HOM05D002480 ORTHO05D003145 3.3e-20 103.2 297 28.6
FAN19G0554 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.6e-20 102.4 91 57.1
FAN06G1988 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.3e-20 102.1 108 53.7
FAN13G0545 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.3e-20 102.1 148 41.9
FvH4_6g16701 Fragaria vesca HOM05D002480 ORTHO05D003145 8.1e-19 98.6 254 31.9
FvH4_7g01201 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-18 97.8 214 36.0
FAN18G3832 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-18 97.4 151 37.7
FAN07G1922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.3e-18 95.9 150 40.0
FAN08G0647 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.3e-18 95.9 128 43.8
FAN24G3444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.3e-18 95.9 284 30.6
FvH4_1g20081 Fragaria vesca HOM05D002480 ORTHO05D003145 1.5e-17 94.4 107 47.7
FvH4_3g34441 Fragaria vesca HOM05D002480 ORTHO05D003145 1.5e-17 94.4 285 30.2
FAN19G0872 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.5e-17 92.8 116 44.8
FAN12G1965 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-16 91.3 143 35.0
FvH4_1g21331 Fragaria vesca HOM05D002480 ORTHO05D035625 2.2e-16 90.5 116 49.1
FAN19G0644 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.2e-16 90.5 131 40.5
FAN02G0444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.9e-16 90.1 283 26.9
FAN28G0509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.4e-16 88.6 265 29.1
FAN07G2297 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-15 87.8 100 49.0
FAN18G3828 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.4e-15 85.9 277 29.6
FvH4_4g05732 Fragaria vesca HOM05D002480 ORTHO05D003145 7.1e-15 85.5 131 33.6
FAN05G4151 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.3e-15 85.1 98 42.9
FAN21G3182 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.7e-14 83.6 132 37.1
FvH4_6g07931 Fragaria vesca HOM05D002480 ORTHO05D003145 6.0e-14 82.4 123 39.8
FAN10G2799 Fragaria x ananassa HOM05D000125 ORTHO05D000120 1.0e-13 81.6 110 38.2
FAN12G2566 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-13 81.6 226 30.1
FAN09G1541 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-13 81.3 129 39.5
FvH4_5g12461 Fragaria vesca HOM05D002480 ORTHO05D003145 1.8e-13 80.9 107 40.2
FvH4_1g27932 Fragaria vesca HOM05D002480 ORTHO05D003145 2.3e-13 80.5 137 39.4
FAN26G1082 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-13 80.5 118 44.1
FAN04G3005 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.0e-13 80.1 105 41.9
FAN13G0402 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.0e-13 80.1 52 71.2
FAN02G3411 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.9e-13 79.7 326 24.2
FvH4_2g07601 Fragaria vesca HOM05D002480 ORTHO05D003145 5.1e-13 79.3 106 39.6
FAN08G0843 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.1e-13 79.3 228 32.0
FAN26G3107 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.7e-13 79.0 160 37.5
FvH4_4g12651 Fragaria vesca HOM05D008430 ORTHO05D010682 1.1e-12 78.2 145 31.7
FAN02G1315 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-12 77.8 96 44.8
FAN02G4154 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-12 77.8 96 44.8
FvH4_4g06577 Fragaria vesca HOM05D002480 ORTHO05D003145 1.9e-12 77.4 65 60.0
FAN15G1992 Fragaria x ananassa HOM05D000261 ORTHO05D001168 1.9e-12 77.4 283 28.3
FAN21G1379 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.5e-12 77.0 199 34.2
FvH4_7g10071 Fragaria vesca HOM05D002480 ORTHO05D003145 4.3e-12 76.3 267 27.7
FAN14G1957 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.3e-12 76.3 176 30.7
FAN09G4566 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.6e-12 75.9 297 27.3
FvH4_7g18780 Fragaria vesca HOM05D002480 ORTHO05D003145 9.6e-12 75.1 106 39.6
FAN27G0173 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-11 74.7 204 31.9
FAN15G1816 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-11 74.3 86 43.0
FAN16G1666 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.8e-11 72.8 86 45.3
FAN21G1308 Fragaria x ananassa HOM05D008430 ORTHO05D010682 6.2e-11 72.4 124 29.0
FAN09G2457 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-10 71.2 113 36.3
FvH4_7g08120 Fragaria vesca HOM05D002480 ORTHO05D003145 1.8e-10 70.9 62 46.8
FAN06G0850 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-10 70.9 62 46.8
FAN14G0992 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-10 70.9 90 42.2
FAN20G0719 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.4e-10 70.5 112 40.2
FAN15G0584 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.1e-10 70.1 240 28.8
FAN16G3475 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.3e-10 69.3 68 50.0
FAN05G3338 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-10 68.9 114 38.6
FAN07G2468 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-10 68.9 98 35.7
FAN14G0874 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-10 68.9 122 33.6
FAN25G2926 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-10 68.9 164 29.9
FAN06G4463 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-09 68.2 94 41.5
FAN14G0918 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-09 67.4 59 52.5
FAN14G2911 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-09 67.4 59 52.5
FAN17G1610 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-09 67.4 53 58.5
FAN22G0805 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-09 67.0 175 32.6
TWI56G0633 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 2.6e-09 67.0 170 28.8
FvH4_6g31171 Fragaria vesca HOM05D002480 ORTHO05D003145 3.4e-09 66.6 194 27.8
FAN05G4537 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.4e-09 66.6 53 54.7
FvH4_5g37291 Fragaria vesca HOM05D002480 ORTHO05D003145 4.5e-09 66.2 169 29.6
FAN07G2346 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.5e-09 66.2 127 32.3
TWI39G0375 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 4.5e-09 66.2 170 28.8
FAN05G5003 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.8e-09 65.9 72 41.7
FvH4_5g30551 Fragaria vesca HOM05D002480 ORTHO05D003145 7.6e-09 65.5 110 38.2
FvH4_6g13840 Fragaria vesca HOM05D002480 ORTHO05D003145 7.6e-09 65.5 82 40.2
RcHm_v2.0_Chr1g0344871 Rosa chinensis HOM05D003375 ORTHO05D004719 7.6e-09 65.5 145 26.2
FAN11G1368 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.9e-09 65.1 125 30.4
FAN21G1872 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.9e-09 65.1 68 47.1
FvH4_3g15420 Fragaria vesca HOM05D002480 ORTHO05D003145 1.7e-08 64.3 89 42.7
RcHm_v2.0_Chr5g0032121 Rosa chinensis HOM05D008430 ORTHO05D011995 1.7e-08 64.3 142 26.1
FAN08G0312 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.2e-08 63.9 153 27.5
FAN02G2084 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.9e-08 63.5 153 28.8
FAN13G1471 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.9e-08 62.8 144 29.9
Prupe.7G053800 Prunus persica HOM05D000003 ORTHO05D000126 4.9e-08 62.8 169 24.3
FAN12G1540 Fragaria x ananassa HOM05D003375 ORTHO05D004719 6.4e-08 62.4 149 27.5
FAN26G1926 Fragaria x ananassa HOM05D003375 ORTHO05D004719 6.4e-08 62.4 145 28.3
FvH4_3g26791 Fragaria vesca HOM05D002480 ORTHO05D003145 1.1e-07 61.6 126 34.9
FAN03G0441 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-07 61.6 54 48.1
FAN07G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-07 61.6 59 61.0
FAN14G0817 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.4e-07 61.2 142 26.1
FAN25G1692 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-07 61.2 75 50.7
FAN18G1519 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.9e-07 60.8 72 40.3
FvH4_3g22921 Fragaria vesca HOM05D000003 ORTHO05D000126 3.2e-07 60.1 147 27.2
CANSAT25G3681 Cannabis sativa HOM05D000003 ORTHO05D000126 4.2e-07 59.7 144 24.3
CANSAT64G0727 Cannabis sativa HOM05D000003 ORTHO05D000126 4.2e-07 59.7 143 27.3
FAN06G1617 Fragaria x ananassa HOM05D008119 ORTHO05D010214 4.2e-07 59.7 133 25.6
Prupe.3G196300 Prunus persica HOM05D000003 ORTHO05D000126 4.2e-07 59.7 129 27.1
CANSAT11G0372 Cannabis sativa HOM05D000003 ORTHO05D000126 5.5e-07 59.3 144 24.3
CANSAT35G1319 Cannabis sativa HOM05D000003 ORTHO05D000126 5.5e-07 59.3 144 24.3
FvH4_4g07081 Fragaria vesca HOM05D008119 ORTHO05D010214 5.5e-07 59.3 81 33.3
FAN05G0293 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.1e-07 58.9 262 28.6
FAN06G2080 Fragaria x ananassa HOM05D000125 ORTHO05D000120 7.1e-07 58.9 66 42.4
FAN13G1412 Fragaria x ananassa HOM05D003375 ORTHO05D004719 7.1e-07 58.9 139 30.2
CANSAT78G2226 Cannabis sativa HOM05D000003 ORTHO05D000126 1.2e-06 58.2 143 26.6
FAN20G1730 Fragaria x ananassa HOM05D007432 ORTHO05D005238 1.6e-06 57.8 135 28.1
FAN21G4045 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-06 57.8 99 34.3
FAN03G1973 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-06 57.4 69 50.7
FAN08G1660 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-06 57.4 52 51.9
FAN08G2941 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.1e-06 57.4 106 31.1
Haze_09938 Corylus avellana HOM05D000003 ORTHO05D000126 2.7e-06 57.0 145 24.8
FvH4_7g00272 Fragaria vesca HOM05D008119 ORTHO05D010214 2.7e-06 57.0 143 26.6
Os12g0156200 Oryza sativa ssp. japonica HOM05D000003 ORTHO05D000126 3.5e-06 56.6 148 26.4
FvH4_5g23680 Fragaria vesca HOM05D018539 ORTHO05D005238 4.6e-06 56.2 143 23.8
QL04p084567 Quercus lobata HOM05D000003 ORTHO05D000126 4.6e-06 56.2 182 25.3
FvH4_1g22101 Fragaria vesca HOM05D009150 ORTHO05D005238 6.0e-06 55.8 145 22.8
FvH4_2g08490 Fragaria vesca HOM05D000542 ORTHO05D000202 6.0e-06 55.8 41 53.7
FvH4_5g30830 Fragaria vesca HOM05D002480 ORTHO05D003145 6.0e-06 55.8 55 43.6
FAN09G0991 Fragaria x ananassa HOM05D007432 ORTHO05D005238 6.0e-06 55.8 123 29.3
FAN16G0145 Fragaria x ananassa HOM05D003375 ORTHO05D004719 6.0e-06 55.8 118 26.3
FAN28G1574 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.0e-06 55.8 162 25.9
FAN03G2305 Fragaria x ananassa HOM05D009150 ORTHO05D005238 7.9e-06 55.5 143 23.8
FAN05G2680 Fragaria x ananassa HOM05D002480 ORTHO05D020619 7.9e-06 55.5 59 49.2


User provided reference genes

Program Settings